Bhi11G000637 (gene) Wax gourd

NameBhi11G000637
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRibonuclease H
Locationchr11 : 20353565 .. 20354273 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCATGTCTGTGCTAGCTAGAGGAATAAAAGGAATACTATTGCTAGGGTTCTCAATGAGGATGGTATCTGGCTGGATAATGAGGATGATATTGGATGCGAACCGATCAATTATTTATCAACTCTTTTCAAGTCTCTTTACCCTAAGCTTGAGGATATAGATAAGATTTTGGAAAGGATTAACCTGAAAATTACCACTCATCATAACCAGGTGCTGGATGCCATTTTTACGAAAGAGGAGATCAAAAGAGCTTTAAAGGAAATGCTCCCTACTAAAGCCTCTGGTCCTGATGGGGATCACGTGTTGTTCTTTCAACACTACTGGGAGATTATAGGGAATGATATTACCAATATATGCATGAACATTCTAAATAAGGGTAGTTCCTTGGGGGATTTGAACCATATGTTTATCGCTTTGATCTTGAAGACTAAACATCCTAAGAATATGTCAGAGTTTAGGCCCATAAGTTTATGCAACGTTATTTACAAATTGATATCTAAATCCTTGGCTAACAGATTGTAGAAGATTATAAACGATGTTATCTCTCCTAATCAATCGACATCCGTCCCTGGAAAATTAATTTCGGATAATGTACTTATCAGTTTTGAGTATATCCATGCCTTGAATTCTAGAAAGGGTGGTAAAAATGGGAAGATGGCTCTCAAACTGGACATGAGTAAGGCTTATGATAGGGTAGAGTTATAG

mRNA sequence

ATGGTTTCATGTCTGAATACTATTGCTAGGGTTCTCAATGAGGATGGTATCTGGCTGGATAATGAGGATGATATTGGATGCGAACCGATCAATTATTTATCAACTCTTTTCAAGTCTCTTTACCCTAAGCTTGAGGATATAGATAAGATTTTGGAAAGGATTAACCTGAAAATTACCACTCATCATAACCAGGTGCTGGATGCCATTTTTACGAAAGAGGAGATCAAAAGAGCTTTAAAGGAAATGCTCCCTACTAAAGCCTCTGGTCCTGATGGGGATCACGTGTTGTTCTTTCAACACTACTGGGAGATTATAGGGAATGATATTACCAATATATGCATGAACATTCTAAATAAGGGTAGTTCCTTGGGGGATTTGAACCATATGTTTATCGCTTTGATCTTGAAGACTAAACATCCTAAGAATATGTCAGATTTTGAGTATATCCATGCCTTGAATTCTAGAAAGGGTGGTAAAAATGGGAAGATGGCTCTCAAACTGGACATGAGTAAGGCTTATGATAGGGTAGAGTTATAG

Coding sequence (CDS)

ATGGTTTCATGTCTGAATACTATTGCTAGGGTTCTCAATGAGGATGGTATCTGGCTGGATAATGAGGATGATATTGGATGCGAACCGATCAATTATTTATCAACTCTTTTCAAGTCTCTTTACCCTAAGCTTGAGGATATAGATAAGATTTTGGAAAGGATTAACCTGAAAATTACCACTCATCATAACCAGGTGCTGGATGCCATTTTTACGAAAGAGGAGATCAAAAGAGCTTTAAAGGAAATGCTCCCTACTAAAGCCTCTGGTCCTGATGGGGATCACGTGTTGTTCTTTCAACACTACTGGGAGATTATAGGGAATGATATTACCAATATATGCATGAACATTCTAAATAAGGGTAGTTCCTTGGGGGATTTGAACCATATGTTTATCGCTTTGATCTTGAAGACTAAACATCCTAAGAATATGTCAGATTTTGAGTATATCCATGCCTTGAATTCTAGAAAGGGTGGTAAAAATGGGAAGATGGCTCTCAAACTGGACATGAGTAAGGCTTATGATAGGGTAGAGTTATAG

Protein sequence

MVSCLNTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQVLDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGDLNHMFIALILKTKHPKNMSDFEYIHALNSRKGGKNGKMALKLDMSKAYDRVEL
BLAST of Bhi11G000637 vs. TrEMBL
Match: tr|A0A2N9F9E4|A0A2N9F9E4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11522 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30
Identity = 72/172 (41.86%), Postives = 108/172 (62.79%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N I+R+ +E G W D+ ++I    I Y +TLF +  P    +++ +  I   +T   N  
Sbjct: 763 NHISRLSDERGRWYDSNEEIAALMIEYYNTLFSTSNP--TSLNEAVANIPKVVTVDMNNN 822

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   F  EE+++A+K+M P+KA GPDG   +F+Q YW ++G+D+T   ++ LN G  L  
Sbjct: 823 LIRDFRVEEVEQAIKQMAPSKAPGPDGMPPIFYQKYWHVVGHDVTTAVLSCLNSGRVLKS 882

Query: 126 LNHMFIALILKTKHPKNMSDFEYIHALNSRKGGKNGKMALKLDMSKAYDRVE 178
           +NH FI LI K K P+ ++ FE +H +++ K G+ G MALKLDMSKAYDRVE
Sbjct: 883 INHTFITLIPKVKCPEKVA-FETLHHMHTNKLGREGAMALKLDMSKAYDRVE 931

BLAST of Bhi11G000637 vs. TrEMBL
Match: tr|A0A2N9EHR8|A0A2N9EHR8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2167 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.7e-30
Identity = 74/178 (41.57%), Postives = 103/178 (57.87%), Query Frame = 0

Query: 4   CLNTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHN 63
           C N I R+ N DG+W +N+D +    + Y + LF +  P    I+K++E I   +T+  N
Sbjct: 234 CHNHIHRLKNNDGVWTENQDQVPQLFLEYYTNLFTTETP--SQIEKVVENILPVVTSEMN 293

Query: 64  QVLDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSL 123
           + L   FT +E++ A+K M+P KA G DG   LF+Q YW + G D+T   +  LN G  L
Sbjct: 294 RQLTRDFTSQEVENAMKHMVPLKAPGSDGLPPLFYQKYWHLAGADVTQAVLTSLNSGRML 353

Query: 124 GDLNHMFIALILKTKHPKNMSDFEYIHALN----SRKGGKNGKMALKLDMSKAYDRVE 178
             +NH  I  I K K+P+++SD+  I   N        GK G MALKLDMSKAYDRVE
Sbjct: 354 QAINHTHITFIPKIKNPESVSDYRPISLCNVIYKIASKGKQGSMALKLDMSKAYDRVE 409

BLAST of Bhi11G000637 vs. TrEMBL
Match: tr|A0A2N9IYL5|A0A2N9IYL5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57874 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 72/186 (38.71%), Postives = 105/186 (56.45%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N I R+ N+ G W      +    I Y ++LF++  P  E +++++E I   +T   N  
Sbjct: 753 NYITRLKNQAGQWTTTHAQVPSLFIEYFNSLFQTANP--EQVEEVVEDIQSVVTEEMNSQ 812

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   FT EE++ ALK+M P KA GPDG   +F+Q YW +IG D+T+  +  LN G  L  
Sbjct: 813 LVKDFTAEEVQVALKQMAPIKAPGPDGLPPIFYQKYWHLIGKDVTSAVLTCLNSGKLLKA 872

Query: 126 LNHMFIALILKTKHPKNMSD--------------FEYIHALNSRKGGKNGKMALKLDMSK 178
           +NH +I LI K ++P+ + +              FE +H +  ++ GK G MALKLDMSK
Sbjct: 873 INHTYITLIPKVQNPEEVMEFRPISLCNITFLVAFETLHHMQHQRTGKTGSMALKLDMSK 932

BLAST of Bhi11G000637 vs. TrEMBL
Match: tr|A0A2N9GPZ7|A0A2N9GPZ7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N I+ + + DG+W   +  I    ++Y   +F S  P  E I  +L+ +   +T   N  
Sbjct: 239 NHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQ 298

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L A FTK+E+  ALK+M PTKA GPDG   +F+Q YW+I+G ++T   ++IL+ G  L  
Sbjct: 299 LQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRK 358

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           +N+  IALI K K+P+N++D                                        
Sbjct: 359 INYTHIALIPKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPG 418

BLAST of Bhi11G000637 vs. TrEMBL
Match: tr|A0A2N9IPS8|A0A2N9IPS8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 0

Query: 6    NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
            N I+ + + DG+W   +  I    ++Y   +F S  P  E I  +L+ +   +T   N  
Sbjct: 814  NHISGLRDRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQ 873

Query: 66   LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
            L A FTK+E+  ALK+M PTKA GPDG   +F+Q YW+I+G ++T   ++IL+ G  L  
Sbjct: 874  LQAEFTKDEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRK 933

Query: 126  LNHMFIALILKTKHPKNMSD---------------------------------------- 178
            +N+  IALI K K+P+N++D                                        
Sbjct: 934  INYTHIALIPKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPG 993

BLAST of Bhi11G000637 vs. NCBI nr
Match: XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           NTI  + +E G W DNE+ I    I+Y + ++ S +P    I+++ E I  K+T   N+ 
Sbjct: 330 NTIVGIWDEQGRWCDNEESIAQAAISYFNNIYSSSHP--SQIEEVTEAIPFKVTEEMNES 389

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   FTKEE+  ALK++ P KA GPDG   +FFQ YW I+GN++T++ +N+LN    + +
Sbjct: 390 LIREFTKEEVAVALKQIHPNKAPGPDGMSAVFFQKYWSIVGNNVTDMVLNVLNHNLPIPE 449

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           LN   I+LI KT +PK M+D                                        
Sbjct: 450 LNKTNISLIPKTNNPKRMTDFRPISLCNVVYKLISKILANRLKPLLPHIISENQSAFTSD 509

BLAST of Bhi11G000637 vs. NCBI nr
Match: XP_023901742.1 (uncharacterized protein LOC112013579 [Quercus suber])

HSP 1 Score: 133.7 bits (335), Expect = 6.4e-28
Identity = 73/222 (32.88%), Postives = 111/222 (50.00%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N+I+R+ NEDGIW D+++ I    ++Y   ++ S  P    I++++  I  ++T   N  
Sbjct: 215 NSISRLWNEDGIWCDSKESISATALSYFENIYTSSSP--TGINEVINAIPRRVTDEMNSE 274

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   FT EE+ +ALK++ PTKA GPDG    FF +YW+I+G  ITN+ +N+LN    + +
Sbjct: 275 LSKTFTSEEVLKALKQLHPTKAPGPDGMSATFFHNYWDIVGPSITNMVLNVLNSNLPMTE 334

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           +N   I+LI KT  P  M++                                        
Sbjct: 335 INKTNISLIPKTNQPVRMTEFRPISLCNTTYKIISKVLANRFKAILPNIISENQSAFTPN 394

BLAST of Bhi11G000637 vs. NCBI nr
Match: XP_023906330.1 (uncharacterized protein LOC112018052 [Quercus suber])

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27
Identity = 73/222 (32.88%), Postives = 110/222 (49.55%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N I  V N  G W  +ED I    + Y  +LF S  P+ +D+ ++LE ++ ++T   N  
Sbjct: 479 NQIVGVFNTVGEWCTDEDQIADIAVEYFQSLFTSSQPEDDDVSRVLEAVDRRVTDEMNGT 538

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   +T EEI++AL +M P+KA GPDG    FFQ +W I+G D+T+  +++LN G  L  
Sbjct: 539 LLEPYTGEEIRQALFQMHPSKAPGPDGMSPFFFQKFWNIVGYDVTSAILSVLNSGCLLRK 598

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           +N+ +I L+ K   P ++ D                                        
Sbjct: 599 MNYTYIVLVPKKNDPNSLGDFRPICLGNVISRLLSKVMANRLKLILPRVISDAQSAFIPD 658

BLAST of Bhi11G000637 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 129.8 bits (325), Expect = 9.2e-27
Identity = 77/222 (34.68%), Postives = 108/222 (48.65%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           NTI  +++E+G W D+ + I    ++Y  T++ S  P    I ++L+ I   +T   N  
Sbjct: 206 NTINGIMDENGNWQDSTEGIAKVAVSYFQTIYSSSVP--TRISEVLDAIPTTVTEEMNHS 265

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   FT+EEI+ AL +M PTKA GPDG   +FFQ YW I+GNDI  + +++LN   S+ +
Sbjct: 266 LIQEFTREEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVE 325

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           +N   I L+ K K+P  MSD                                        
Sbjct: 326 INKTNITLVPKIKNPTKMSDFRPISLCNVVYKLISKVLANRLKNILPQIISENQSAFLSG 385

BLAST of Bhi11G000637 vs. NCBI nr
Match: XP_023909336.1 (uncharacterized protein LOC112020997 [Quercus suber])

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 77/222 (34.68%), Postives = 110/222 (49.55%), Query Frame = 0

Query: 6   NTIARVLNEDGIWLDNEDDIGCEPINYLSTLFKSLYPKLEDIDKILERINLKITTHHNQV 65
           N I++++ E+G  +++E  IG    +Y S LF +  P   D+D IL+ I+ K+T   NQ 
Sbjct: 374 NFISKLIGEEGQVVEDEQKIGEMMSDYFSDLFTTATP--SDLDSILQGIDRKVTPQMNQE 433

Query: 66  LDAIFTKEEIKRALKEMLPTKASGPDGDHVLFFQHYWEIIGNDITNICMNILNKGSSLGD 125
           L   FT  E++ ALK+M    A GPDG   +FF+HYW  +G D+ +  +++LN G    +
Sbjct: 434 LTREFTANEVEAALKQMKSISAPGPDGMPPIFFKHYWNTVGPDVLSATLSVLNSGIIPPN 493

Query: 126 LNHMFIALILKTKHPKNMSD---------------------------------------- 178
           +NH FI+LI KTK P+   D                                        
Sbjct: 494 INHTFISLIPKTKSPETAKDFRPISLCNVIYKLISKTIANRLKKCLPKLISDSQSAFLSN 553

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2N9F9E4|A0A2N9F9E4_FAGSY2.0e-3041.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11522 PE=4 SV=1[more]
tr|A0A2N9EHR8|A0A2N9EHR8_FAGSY7.7e-3041.57Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2167 PE=4 SV=1[more]
tr|A0A2N9IYL5|A0A2N9IYL5_FAGSY1.5e-2838.71Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57874 PE=4 SV=1[more]
tr|A0A2N9GPZ7|A0A2N9GPZ7_FAGSY2.5e-2833.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1[more]
tr|A0A2N9IPS8|A0A2N9IPS8_FAGSY2.5e-2833.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023878301.11.2e-2935.59uncharacterized protein LOC111990748 [Quercus suber][more]
XP_023901742.16.4e-2832.88uncharacterized protein LOC112013579 [Quercus suber][more]
XP_023906330.11.9e-2732.88uncharacterized protein LOC112018052 [Quercus suber][more]
XP_023881891.19.2e-2734.68uncharacterized protein LOC111994244 [Quercus suber][more]
XP_023909336.12.1e-2634.68uncharacterized protein LOC112020997 [Quercus suber][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000637Bhi11M000637mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 7..144