Bhi11G000516 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000516
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ubiquitin
Location	chr11 : 15139505 .. 15139753 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGCAGATGCTGATCTTTGTGAATACGTTAGATGGAAAGAGTAGAATTTCTATAGACGTTGGATCAATGGATACGATTGCGGCTGTAAAGGCTACAATCAAATCCCATAAGATCATACCTATTGAGTCTCAGAAGCTGATTTATGCTGGAAAGACCCTCGAAGATCATCAAACTTTAGCACATTATAACATCCTCGATGATTCTATTTTGTATTTGGTTTTTCGTCTTCATGGTGGTTTTTAA

mRNA sequence

ATGGAAATGCAGATGCTGATCTTTGTGAATACGTTAGATGGAAAGAGTAGAATTTCTATAGACGTTGGATCAATGGATACGATTGCGGCTGTAAAGGCTACAATCAAATCCCATAAGATCATACCTATTGAGTCTCAGAAGCTGATTTATGCTGGAAAGACCCTCGAAGATCATCAAACTTTAGCACATTATAACATCCTCGATGATTCTATTTTGTATTTGGTTTTTCGTCTTCATGGTGGTTTTTAA

Coding sequence (CDS)

ATGGAAATGCAGATGCTGATCTTTGTGAATACGTTAGATGGAAAGAGTAGAATTTCTATAGACGTTGGATCAATGGATACGATTGCGGCTGTAAAGGCTACAATCAAATCCCATAAGATCATACCTATTGAGTCTCAGAAGCTGATTTATGCTGGAAAGACCCTCGAAGATCATCAAACTTTAGCACATTATAACATCCTCGATGATTCTATTTTGTATTTGGTTTTTCGTCTTCATGGTGGTTTTTAA

Protein sequence

MEMQMLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHYNILDDSILYLVFRLHGGF

Homology

[Close]

BLAST of Bhi11G000516 vs. TAIR10
Match: AT4G05320.2 (polyubiquitin 10)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-15
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 381 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 440

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 441 NIQKESTLHLVLRLRGGF 457

[Close]

BLAST of Bhi11G000516 vs. TAIR10
Match: AT4G05050.1 (ubiquitin 11)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-15
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 153 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 212

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 213 NIQKESTLHLVLRLRGGF 229

[Close]

BLAST of Bhi11G000516 vs. TAIR10
Match: AT4G02890.3 (Ubiquitin family protein)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-15
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 229 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 288

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 289 NIQKESTLHLVLRLRGGF 305

[Close]

BLAST of Bhi11G000516 vs. TAIR10
Match: AT1G65350.1 (ubiquitin 13)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-14
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 152 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADY 211

Query: 65  NILDDSILYLVFRLHGG 82
           NI  +S L+LV RL GG
Sbjct: 212 NIQKESTLHLVLRLRGG 227

[Close]

BLAST of Bhi11G000516 vs. TAIR10
Match: AT1G23410.1 (Ribosomal protein S27a / Ubiquitin family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.2e-14
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 5  MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
          M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 1  MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 65 NILDDSILYLVFRLHGG 82
          NI  +S L+LV RL GG
Sbjct: 61 NIQKESTLHLVLRLRGG 76

[Close]

BLAST of Bhi11G000516 vs. Swiss-Prot
Match: sp|P0CG85|UBI1P_NICSY (Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 381 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 440

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 441 NIQKESTLHLVLRLRGGF 457

[Close]

BLAST of Bhi11G000516 vs. Swiss-Prot
Match: sp|P0CG84|UBI4P_NICSY (Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 301 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 360

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 361 NIQKESTLHLVLRLRGGF 377

[Close]

BLAST of Bhi11G000516 vs. Swiss-Prot
Match: sp|P69322|UBIQP_PEA (Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 305 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 364

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 365 NIQKESTLHLVLRLRGGF 381

[Close]

BLAST of Bhi11G000516 vs. Swiss-Prot
Match: sp|P69325|UBIQP_SOYBN (Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 229 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 288

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 289 NIQKESTLHLVLRLRGGF 305

[Close]

BLAST of Bhi11G000516 vs. Swiss-Prot
Match: sp|P69313|UBIQ_HELAN (Ubiquitin OS=Helianthus annuus OX=4232 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 5  MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
          M IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 1  MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 65 NILDDSILYLVFRLHGGF 83
          NI  +S L+LV RL GGF
Sbjct: 61 NIQKESTLHLVLRLRGGF 77

[Close]

BLAST of Bhi11G000516 vs. TrEMBL
Match: tr|A0A1Q3B9A7|A0A1Q3B9A7_CEPFO (Ubiquitin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07952 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-12
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP++ Q+LI+AGK LED +TLA Y
Sbjct: 305 MQIFVKTLTGKT-ITLEVESSDTIENVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 364

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 365 NIQKESTLHLVLRLRGGF 381

[Close]

BLAST of Bhi11G000516 vs. TrEMBL
Match: tr|A0A0G4J149|A0A0G4J149_PLABS (Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_001954 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 3  MQMLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLA 62
          M M IFV TL GK+ I++DV S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA
Sbjct: 1  MTMQIFVKTLTGKT-ITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 60

Query: 63 HYNILDDSILYLVFRLHGG 82
           YNI  +S L+LV RL GG
Sbjct: 61 DYNIQKESTLHLVLRLRGG 78

[Close]

BLAST of Bhi11G000516 vs. TrEMBL
Match: tr|A0A0G4J4I4|A0A0G4J4I4_PLABS (Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_002534 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 3  MQMLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLA 62
          M M IFV TL GK+ I++DV S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA
Sbjct: 1  MTMQIFVKTLTGKT-ITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 60

Query: 63 HYNILDDSILYLVFRLHGG 82
           YNI  +S L+LV RL GG
Sbjct: 61 DYNIQKESTLHLVLRLRGG 78

[Close]

BLAST of Bhi11G000516 vs. TrEMBL
Match: tr|A0A0G4IGV5|A0A0G4IGV5_PLABS (Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_000236 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 3  MQMLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLA 62
          M M IFV TL GK+ I++DV S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA
Sbjct: 11 MTMQIFVKTLTGKT-ITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 70

Query: 63 HYNILDDSILYLVFRLHGG 82
           YNI  +S L+LV RL GG
Sbjct: 71 DYNIQKESTLHLVLRLRGG 88

[Close]

BLAST of Bhi11G000516 vs. TrEMBL
Match: tr|D7M2I1|D7M2I1_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_663560 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP++ Q+LI+AGK LED +TLA Y
Sbjct: 153 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 212

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 213 NIQKESTLHLVLRLRGGF 229

[Close]

BLAST of Bhi11G000516 vs. NCBI nr
Match: GAV64434.1 (ubiquitin domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 79.3 bits (194), Expect = 6.6e-12
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP++ Q+LI+AGK LED +TLA Y
Sbjct: 305 MQIFVKTLTGKT-ITLEVESSDTIENVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 364

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 365 NIQKESTLHLVLRLRGGF 381

[Close]

BLAST of Bhi11G000516 vs. NCBI nr
Match: EFH49005.1 (hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp. lyrata] >EFH49028.1 predicted protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5   MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
           M IFV TL GK+ I+++V S DTI  VKA I+  + IP++ Q+LI+AGK LED +TLA Y
Sbjct: 153 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 212

Query: 65  NILDDSILYLVFRLHGGF 83
           NI  +S L+LV RL GGF
Sbjct: 213 NIQKESTLHLVLRLRGGF 229

[Close]

BLAST of Bhi11G000516 vs. NCBI nr
Match: AQK60494.1 (ubiquitin2 [Zea mays] >PWZ29601.1 Polyubiquitin-A [Zea mays])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 3  MQMLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLA 62
          MQM IFV TL GK+ I+++V S DTI  VKA I+  + IP + Q+LI+AGK LED +TLA
Sbjct: 1  MQMQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 60

Query: 63 HYNILDDSILYLVFRLHGG 82
           YNI  +S L+LV RL GG
Sbjct: 61 DYNIQKESTLHLVLRLRGG 78

[Close]

BLAST of Bhi11G000516 vs. NCBI nr
Match: XP_009612239.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB2 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5  MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
          M IFV TL GK+ I+++VGS DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 1  MQIFVKTLTGKT-ITLEVGSSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 65 NILDDSILYLVFRLHGG 82
          NI  +S L+LV RL GG
Sbjct: 61 NIQKESTLHLVLRLRGG 76

[Close]

BLAST of Bhi11G000516 vs. NCBI nr
Match: XP_009612240.1 (PREDICTED: ubiquitin-like isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5  MLIFVNTLDGKSRISIDVGSMDTIAAVKATIKSHKIIPIESQKLIYAGKTLEDHQTLAHY 64
          M IFV TL GK+ I+++VGS DTI  VKA I+  + IP + Q+LI+AGK LED +TLA Y
Sbjct: 1  MQIFVKTLTGKT-ITLEVGSSDTIGNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 60

Query: 65 NILDDSILYLVFRLHGG 82
          NI  +S L+LV RL GG
Sbjct: 61 NIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of Bhi11G000516 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05320.2	5.9e-15	56.41	polyubiquitin 10	[more]
AT4G05050.1	5.9e-15	56.41	ubiquitin 11	[more]
AT4G02890.3	5.9e-15	56.41	Ubiquitin family protein	[more]
AT1G65350.1	1.7e-14	55.84	ubiquitin 13	[more]
AT1G23410.1	2.2e-14	55.84	Ribosomal protein S27a / Ubiquitin family protein	[more]

BLAST of Bhi11G000516 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CG85\|UBI1P_NICSY	1.1e-13	56.41	Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1	[more]
sp\|P0CG84\|UBI4P_NICSY	1.1e-13	56.41	Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1	[more]
sp\|P69322\|UBIQP_PEA	1.1e-13	56.41	Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2	[more]
sp\|P69325\|UBIQP_SOYBN	1.1e-13	56.41	Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2	[more]
sp\|P69313\|UBIQ_HELAN	1.1e-13	56.41	Ubiquitin OS=Helianthus annuus OX=4232 PE=3 SV=2	[more]

BLAST of Bhi11G000516 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1Q3B9A7\|A0A1Q3B9A7_CEPFO	4.4e-12	56.41	Ubiquitin domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v...	[more]
tr\|A0A0G4J149\|A0A0G4J149_PLABS	5.7e-12	56.96	Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_001954 PE=4...	[more]
tr\|A0A0G4J4I4\|A0A0G4J4I4_PLABS	5.7e-12	56.96	Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_002534 PE=4...	[more]
tr\|A0A0G4IGV5\|A0A0G4IGV5_PLABS	5.7e-12	56.96	Uncharacterized protein OS=Plasmodiophora brassicae OX=37360 GN=PBRA_000236 PE=4...	[more]
tr\|D7M2I1\|D7M2I1_ARALL	5.7e-12	56.41	Predicted protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_663...	[more]

BLAST of Bhi11G000516 vs. NCBI nr


Match Name	E-value	Identity	Description
GAV64434.1	6.6e-12	56.41	ubiquitin domain-containing protein [Cephalotus follicularis]	[more]
EFH49005.1	8.6e-12	56.41	hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp. lyrata] >EFH49...	[more]
AQK60494.1	8.6e-12	56.96	ubiquitin2 [Zea mays] >PWZ29601.1 Polyubiquitin-A [Zea mays]	[more]
XP_009612239.1	8.6e-12	57.14	PREDICTED: ubiquitin-NEDD8-like protein RUB2 isoform X1 [Nicotiana tomentosiform...	[more]
XP_009612240.1	8.6e-12	57.14	PREDICTED: ubiquitin-like isoform X2 [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-like_domsf
IPR019954	Ubiquitin_CS
IPR000626	Ubiquitin_dom
IPR019956	Ubiquitin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019941	modification-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle
cellular_component	GO:0005634	nucleus
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0031386	protein tag
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000516	Bhi11M000516	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin	PRINTS	PR00348	UBIQUITIN	coord: 16..36 score: 41.96 coord: 37..57 score: 50.59 coord: 58..79 score: 49.55
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 5..77 e-value: 2.8E-20 score: 83.4
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 7..78 e-value: 6.7E-22 score: 76.9
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 5..81 score: 21.415
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 1..82 e-value: 3.2E-26 score: 93.0
None	No IPR available	PANTHER	PTHR10666:SF240	POLYUBIQUITIN 9	coord: 3..81
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 3..81
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 32..57
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 4..81

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000516	Wax gourd	wgowgoB018
Bhi11G000516	Cucumber (Gy14) v1	cgywgoB049
Bhi11G000516	Cucumber (Gy14) v2	cgybwgoB209
Bhi11G000516	Cucurbita maxima (Rimu)	cmawgoB0421
Bhi11G000516	Cucurbita maxima (Rimu)	cmawgoB0821
Bhi11G000516	Cucurbita moschata (Rifu)	cmowgoB0406
Bhi11G000516	Cucurbita moschata (Rifu)	cmowgoB0817
Bhi11G000516	Cucurbita pepo (Zucchini)	cpewgoB0000
Bhi11G000516	Cucurbita pepo (Zucchini)	cpewgoB0484
Bhi11G000516	Wild cucumber (PI 183967)	cpiwgoB218
Bhi11G000516	Wild cucumber (PI 183967)	cpiwgoB234
Bhi11G000516	Cucumber (Chinese Long) v3	cucwgoB223
Bhi11G000516	Cucumber (Chinese Long) v2	cuwgoB218
Bhi11G000516	Bottle gourd (USVL1VR-Ls)	lsiwgoB410
Bhi11G000516	Melon (DHL92) v3.6.1	medwgoB499
Bhi11G000516	Melon (DHL92) v3.5.1	mewgoB499
Bhi11G000516	Watermelon (Charleston Gray)	wcgwgoB080
Bhi11G000516	Watermelon (97103) v2	wgowmbB003
Bhi11G000516	Watermelon (97103) v2	wgowmbB039
Bhi11G000516	Watermelon (97103) v1	wgowmB009
Bhi11G000516	Silver-seed gourd	carwgoB0777
Bhi11G000516	Silver-seed gourd	carwgoB0927