Bhi11G000216 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000216
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Dirigent protein
Location	chr11 : 5888828 .. 5889097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGGGAGCCTTTATAACCTTTGGCCTCGACACCTTGCAAAGCATTAGCATAGCCAAGATCAGCTTGCATTTGAAGCACCATATTGATTCCCTCTCGATTATCAGTGGGACTTATAATGTTAAACTGTTGAATAACCCTATTGTCGGAGGGACTGGGGACTTCTTGTTCGTACAAGACTATGTGATGTCATCTCCAGTGGATCTCGTCGGCATCATAGTGGTTTACAAGTTGGAATTTCATCTTTACTGGCCGCCCTATGCATAA

mRNA sequence

ATGTCAAAGGGAGCCTTTATAACCTTTGGCCTCGACACCTTGCAAAGCATTAGCATAGCCAAGATCAGCTTGCATTTGAAGCACCATATTGATTCCCTCTCGATTATCAGTGGGACTTATAATGTTAAACTGTTGAATAACCCTATTGTCGGAGGGACTGGGGACTTCTTGTTCGTACAAGACTATGTGATGTCATCTCCAGTGGATCTCGTCGGCATCATAGTGGTTTACAAGTTGGAATTTCATCTTTACTGGCCGCCCTATGCATAA

Coding sequence (CDS)

ATGTCAAAGGGAGCCTTTATAACCTTTGGCCTCGACACCTTGCAAAGCATTAGCATAGCCAAGATCAGCTTGCATTTGAAGCACCATATTGATTCCCTCTCGATTATCAGTGGGACTTATAATGTTAAACTGTTGAATAACCCTATTGTCGGAGGGACTGGGGACTTCTTGTTCGTACAAGACTATGTGATGTCATCTCCAGTGGATCTCGTCGGCATCATAGTGGTTTACAAGTTGGAATTTCATCTTTACTGGCCGCCCTATGCATAA

Protein sequence

MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQDYVMSSPVDLVGIIVVYKLEFHLYWPPYA

Homology

[Close]

BLAST of Bhi11G000216 vs. TrEMBL
Match: tr|B9S6U2|B9S6U2_RICCO (Dirigent protein OS=Ricinus communis OX=3988 GN=RCOM_0873960 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26
Identity = 61/89 (68.54%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           M++G  +T  LD L SIS AKISLHLKHH  S+SI+ GT+NVK  ++P+VGGTGDFL VQ
Sbjct: 90  MAEGTSVTSSLDGLTSISTAKISLHLKHHKGSISIVGGTHNVKPADHPVVGGTGDFLLVQ 149

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPVDL G+ VVYK+EFHLYWPPYA
Sbjct: 150 GYVTSSPVDLSGLTVVYKIEFHLYWPPYA 178

[Close]

BLAST of Bhi11G000216 vs. TrEMBL
Match: tr|M5W462|M5W462_PRUPE (Dirigent protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015438mg PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-26
Identity = 59/89 (66.29%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           +++G  +T  LD LQSIS+AKI+L LKHH  S+SI+ GT+NVK  ++P+VGGTGDFLFVQ
Sbjct: 68  IAQGTSVTSSLDGLQSISVAKITLRLKHHSGSVSIVGGTHNVKPADHPVVGGTGDFLFVQ 127

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPV+L G+ VVYK+EFHLYWPPYA
Sbjct: 128 GYVTSSPVNLKGLTVVYKIEFHLYWPPYA 156

[Close]

BLAST of Bhi11G000216 vs. TrEMBL
Match: tr|A0A251ND76|A0A251ND76_PRUPE (Dirigent protein OS=Prunus persica OX=3760 GN=PRUPE_7G181300 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-26
Identity = 59/89 (66.29%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           +++G  +T  LD LQSIS+AKI+L LKHH  S+SI+ GT+NVK  ++P+VGGTGDFLFVQ
Sbjct: 87  IAQGTSVTSSLDGLQSISVAKITLRLKHHSGSVSIVGGTHNVKPADHPVVGGTGDFLFVQ 146

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPV+L G+ VVYK+EFHLYWPPYA
Sbjct: 147 GYVTSSPVNLKGLTVVYKIEFHLYWPPYA 175

[Close]

BLAST of Bhi11G000216 vs. TrEMBL
Match: tr|A0A067LHU2|A0A067LHU2_JATCU (Dirigent protein OS=Jatropha curcas OX=180498 GN=JCGZ_22386 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-26
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           +++G  +T  LD L SIS+AKI+L LKHH  S+SI+ GT+NVK  N+P+VGGTGDFLFVQ
Sbjct: 90  IAEGTSVTSSLDGLTSISVAKITLRLKHHKGSISIVGGTHNVKPANHPVVGGTGDFLFVQ 149

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPVDL G+ VVYK+EFHL+WPPYA
Sbjct: 150 GYVTSSPVDLSGLTVVYKIEFHLFWPPYA 178

[Close]

BLAST of Bhi11G000216 vs. TrEMBL
Match: tr|A0A2I4GHK4|A0A2I4GHK4_9ROSI (Dirigent protein OS=Juglans regia OX=51240 GN=LOC109007932 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-26
Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           +++G  IT  LD LQSISIAKI+L LKHH  S+SI+ GT+N+K  ++P+VGGTGDFLFVQ
Sbjct: 103 IAEGTTITSSLDGLQSISIAKITLSLKHHKGSVSIVGGTHNIKPSDHPVVGGTGDFLFVQ 162

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPV L G+ VVYK+EFHLYWPPYA
Sbjct: 163 GYVTSSPVSLKGLTVVYKIEFHLYWPPYA 191

[Close]

BLAST of Bhi11G000216 vs. NCBI nr
Match: XP_023007642.1 (dirigent protein 19-like [Cucurbita maxima])

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-28
Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 2   SKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQD 61
           S+G  IT GLD L+SISIAKISL L++H  SLSI+ GT+NVK  N+PIVGGTGDFLFVQ 
Sbjct: 100 SEGTSITSGLDGLRSISIAKISLRLRNHTGSLSIVGGTHNVKPSNHPIVGGTGDFLFVQG 159

Query: 62  YVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
           YV SSPVDLVGI VVYKLEFH+YWPPYA
Sbjct: 160 YVTSSPVDLVGITVVYKLEFHIYWPPYA 187

[Close]

BLAST of Bhi11G000216 vs. NCBI nr
Match: XP_023551883.1 (dirigent protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 2   SKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQD 61
           S+G  IT  LD L+S+SIAKISL L++H  SLSI+ GT+NVK  N+PIVGGTGDFLFVQ 
Sbjct: 124 SEGTSITSSLDGLRSLSIAKISLRLRNHTGSLSIVGGTHNVKPSNHPIVGGTGDFLFVQG 183

Query: 62  YVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
           YV SSPVDLVGI VVYKLEFH+YWPPYA
Sbjct: 184 YVTSSPVDLVGITVVYKLEFHIYWPPYA 211

[Close]

BLAST of Bhi11G000216 vs. NCBI nr
Match: XP_022923245.1 (dirigent protein 19-like [Cucurbita moschata])

HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27
Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 2   SKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQD 61
           S+G  IT  LD L+S+SIAKISL L++H  SLSI+ GT+NVK  N+PIVGGTGDFLFVQ 
Sbjct: 116 SEGTSITSSLDGLRSLSIAKISLRLRNHTGSLSIVGGTHNVKPSNHPIVGGTGDFLFVQG 175

Query: 62  YVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
           YV SSPVDL+GI VVYKLEFH+YWPPYA
Sbjct: 176 YVTSSPVDLIGITVVYKLEFHIYWPPYA 203

[Close]

BLAST of Bhi11G000216 vs. NCBI nr
Match: XP_002521711.2 (dirigent protein 19 [Ricinus communis])

HSP 1 Score: 127.5 bits (319), Expect = 2.3e-26
Identity = 61/89 (68.54%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           M++G  +T  LD L SIS AKISLHLKHH  S+SI+ GT+NVK  ++P+VGGTGDFL VQ
Sbjct: 93  MAEGTSVTSSLDGLTSISTAKISLHLKHHKGSISIVGGTHNVKPADHPVVGGTGDFLLVQ 152

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPVDL G+ VVYK+EFHLYWPPYA
Sbjct: 153 GYVTSSPVDLSGLTVVYKIEFHLYWPPYA 181

[Close]

BLAST of Bhi11G000216 vs. NCBI nr
Match: EEF40698.1 (Disease resistance response protein, putative [Ricinus communis])

HSP 1 Score: 127.5 bits (319), Expect = 2.3e-26
Identity = 61/89 (68.54%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1   MSKGAFITFGLDTLQSISIAKISLHLKHHIDSLSIISGTYNVKLLNNPIVGGTGDFLFVQ 60
           M++G  +T  LD L SIS AKISLHLKHH  S+SI+ GT+NVK  ++P+VGGTGDFL VQ
Sbjct: 90  MAEGTSVTSSLDGLTSISTAKISLHLKHHKGSISIVGGTHNVKPADHPVVGGTGDFLLVQ 149

Query: 61  DYVMSSPVDLVGIIVVYKLEFHLYWPPYA 90
            YV SSPVDL G+ VVYK+EFHLYWPPYA
Sbjct: 150 GYVTSSPVDLSGLTVVYKIEFHLYWPPYA 178

The following BLAST results are available for this feature:

BLAST of Bhi11G000216 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G000216 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G000216 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|B9S6U2\|B9S6U2_RICCO	1.5e-26	68.54	Dirigent protein OS=Ricinus communis OX=3988 GN=RCOM_0873960 PE=3 SV=1	[more]
tr\|M5W462\|M5W462_PRUPE	4.4e-26	66.29	Dirigent protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015438mg PE=3 ...	[more]
tr\|A0A251ND76\|A0A251ND76_PRUPE	4.4e-26	66.29	Dirigent protein OS=Prunus persica OX=3760 GN=PRUPE_7G181300 PE=3 SV=1	[more]
tr\|A0A067LHU2\|A0A067LHU2_JATCU	4.4e-26	66.29	Dirigent protein OS=Jatropha curcas OX=180498 GN=JCGZ_22386 PE=3 SV=1	[more]
tr\|A0A2I4GHK4\|A0A2I4GHK4_9ROSI	9.8e-26	67.42	Dirigent protein OS=Juglans regia OX=51240 GN=LOC109007932 PE=3 SV=1	[more]

BLAST of Bhi11G000216 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007642.1	2.4e-28	76.14	dirigent protein 19-like [Cucurbita maxima]	[more]
XP_023551883.1	2.1e-27	73.86	dirigent protein 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923245.1	2.7e-27	72.73	dirigent protein 19-like [Cucurbita moschata]	[more]
XP_002521711.2	2.3e-26	68.54	dirigent protein 19 [Ricinus communis]	[more]
EEF40698.1	2.3e-26	68.54	Disease resistance response protein, putative [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009699	phenylpropanoid biosynthetic process
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0042349	guiding stereospecific synthesis activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000216	Bhi11M000216	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21495:SF60	SUBFAMILY NOT NAMED	coord: 2..89
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 2..89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000216	MELO3C013719	Melon (DHL92) v3.5.1	mewgoB507
Bhi11G000216	ClCG10G000210	Watermelon (Charleston Gray)	wcgwgoB081
Bhi11G000216	Cucsa.323140	Cucumber (Gy14) v1	cgywgoB644
Bhi11G000216	CmaCh16G012800	Cucurbita maxima (Rimu)	cmawgoB0422
Bhi11G000216	CmoCh16G013330	Cucurbita moschata (Rifu)	cmowgoB0416
Bhi11G000216	Lsi07G010490	Bottle gourd (USVL1VR-Ls)	lsiwgoB535
Bhi11G000216	MELO3C013719.2	Melon (DHL92) v3.6.1	medwgoB500
Bhi11G000216	Carg19434	Silver-seed gourd	carwgoB0514
Bhi11G000216	Cla008949	Watermelon (97103) v1	wgowmB026
Bhi11G000216	Cla97C10G184750	Watermelon (97103) v2	wgowmbB004

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None