Bhi10G001848 (gene) Wax gourd

Overview
NameBhi10G001848
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 58299438 .. 58299837 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCGAACTATTCAAAAACTGAGATCGGAAGCCGGAACCAAGTGGGTAAGTCAACTCAAGGTCCAACGAGTCGTGGGTAACGTAGACAGATGCCCAACAAGGAAAATTCAGCGTTTTGGGCTGCTGCTGCTGCACGTGGATCTTGTACAACCGAGGGCGGCGGCAGTGTACATGCAGGCGGTAGCCGGCGACTGAAGACGGCAGCAGCTGCGACGGAGAGAGAGAGAGAAGGAAAACGCTCTGCTTACCTCCAACGACTGCTCCGGCGTGCGACGGTATCAGCGTGACTGCTGACGTGGAGAAGGCGATCGTCGGCGGGGATGCTGGCGTGAGGGGAGCGGTTGAGAGAGAGAATGATTACAGGGAGAGTGATTGTGCGAGAGAGAGGGCGAGTTGA

mRNA sequence

ATGTTCCGAACTATTCAAAAACTGAGATCGGAAGCCGGAACCAAGTGGGTAAGTCAACTCAAGGTCCAACGAGTCGTGGGTAACGTAGACAGATGCCCAACAAGGAAAATTCAGCGTTTTGGGCTGCTGCTGCTGCACGTGGATCTTGTACAACCGAGGGCGGCGGCAGTGTACATGCAGGCGAGAAGGAAAACGCTCTGCTTACCTCCAACGACTGCTCCGGCGTGCGACGGTATCAGCGTGACTGCTGACGTGGAGAAGGCGATCGTCGGCGGGGATGCTGGCGTGAGGGGAGCGGTTGAGAGAGAGAATGATTACAGGGAGAGTGATTGTGCGAGAGAGAGGGCGAGTTGA

Coding sequence (CDS)

ATGTTCCGAACTATTCAAAAACTGAGATCGGAAGCCGGAACCAAGTGGGTAAGTCAACTCAAGGTCCAACGAGTCGTGGGTAACGTAGACAGATGCCCAACAAGGAAAATTCAGCGTTTTGGGCTGCTGCTGCTGCACGTGGATCTTGTACAACCGAGGGCGGCGGCAGTGTACATGCAGGCGAGAAGGAAAACGCTCTGCTTACCTCCAACGACTGCTCCGGCGTGCGACGGTATCAGCGTGACTGCTGACGTGGAGAAGGCGATCGTCGGCGGGGATGCTGGCGTGAGGGGAGCGGTTGAGAGAGAGAATGATTACAGGGAGAGTGATTGTGCGAGAGAGAGGGCGAGTTGA

Protein sequence

MFRTIQKLRSEAGTKWVSQLKVQRVVGNVDRCPTRKIQRFGLLLLHVDLVQPRAAAVYMQARRKTLCLPPTTAPACDGISVTADVEKAIVGGDAGVRGAVERENDYRESDCARERAS
Homology
[Close]
BLAST of Bhi10G001848 vs. TrEMBL
Match: tr|A0A0A0LJX0|A0A0A0LJX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295980 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 40/103 (38.83%), Postives = 50/103 (48.54%), Query Frame = 0 

Query: 1   MFRTIQKLRSEAGTKWVSQLKVQRVVGNVDRCPTRKIQRF----------GLLLLHVDLV 60
           +F+T++KLR EA TKWV Q KVQRVV NV +CPT K   F                    
Sbjct: 12  VFQTVEKLRLEARTKWVRQFKVQRVVSNVGKCPTEKNSAFXXXXXXXXXXXXXXXXXXXX 71

Query: 61  QPRAAAVYMQARRKTLCLPPTTAPACDGISVTADVEKAIVGGD 94
                       +  L     TA ACDG S+ ADV++A+ GGD
Sbjct: 72  XXXXXXXXXXXXKNRLAFLRRTAAACDGSSLGADVKEAVDGGD 114

[Close]
BLAST of Bhi10G001848 vs. NCBI nr
Match: KGN62073.1 (hypothetical protein Csa_2G295980 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07
Identity = 40/103 (38.83%), Postives = 50/103 (48.54%), Query Frame = 0 

Query: 1   MFRTIQKLRSEAGTKWVSQLKVQRVVGNVDRCPTRKIQRF----------GLLLLHVDLV 60
           +F+T++KLR EA TKWV Q KVQRVV NV +CPT K   F                    
Sbjct: 12  VFQTVEKLRLEARTKWVRQFKVQRVVSNVGKCPTEKNSAFXXXXXXXXXXXXXXXXXXXX 71

Query: 61  QPRAAAVYMQARRKTLCLPPTTAPACDGISVTADVEKAIVGGD 94
                       +  L     TA ACDG S+ ADV++A+ GGD
Sbjct: 72  XXXXXXXXXXXXKNRLAFLRRTAAACDGSSLGADVKEAVDGGD 114

The following BLAST results are available for this feature:
BLAST of Bhi10G001848 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi10G001848 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10G001848 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJX0|A0A0A0LJX0_CUCSA1.2e-0738.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295980 PE=4 SV=1[more]
BLAST of Bhi10G001848 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62073.11.8e-0738.83hypothetical protein Csa_2G295980 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001848Bhi10M001848mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi10G001848Csa2G295980Cucumber (Chinese Long) v2cuwgoB175
Bhi10G001848CSPI02G14980Wild cucumber (PI 183967)cpiwgoB172
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None