Bhi10G001651 (gene) Wax gourd

Overview
NameBhi10G001651
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionS12-like, 30S ribosomal protein S12 subfamily protein
Locationchr10 : 51206987 .. 51220761 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCTGACACAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCGGAAGGGGGCCTTCTCGCCTTCCACTAAGCTGCGCAGGAAAGGCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGCTTCCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTTGCCCAGATCGTTACGCCTTTCGTGCGGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTACCAACTTCTTGACCTTCCGGCACTGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGGCGCGTAGCGCCTGGTACTCGAACATTGGCTCGAGGTATTTCTCTACCCCTTCTTACCCTGAAAAACAGGGGCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGACAACAAGGGGTAGTACAGGAATATTCACCTGTTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAAGGACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACCACTGCTCGCGCAGGTGCTTCCTCTAAGGCGGAACGCTCCTACCGATGCATTTTTACATCCACAGCTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACTTGACCCCTGTTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCAGCCCGCACGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCTCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCCATGAAGACTCGCTTTCGCTACGGCTCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGCGGTCAGAGTCCTGGTCTCCTCCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTACCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTTAGTGATGCTTTCGGCTACTGGACTCTCGCCATCTAGGGTGCAGCACTCCACCGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTCCTCTGGCACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTTGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTATTTTTCAACTCCCCGAAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTCTTCGTTTGAACTCGCCCTTAACTTTAAGGCTATGCCATCCTAAGGTGCTGCTAAATGGAAGGATCTTATCAACGTCCATGAATGAAATAAATCATAGATCGAACTGCGAATCGGAAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAAACCGCTGACATCCCCCACAGGGTAAACCACCGCCTCTCAGGCCCCCGACTGATTTCTAAACATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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ACCGTCGAGAAACGAAAGAAGACTTCCATCTCCAAGTTTAACTCAGACGTAGCTCGCTTCTTTTTGGGTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGCCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGAGGACGGTTTTTGGAGTTAGCTCACCCTCGCGGGATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCTGCTCAGGGTTCCAACCTCAACGGTTGGCAACTAACACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACACCTTACGGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATCCTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGTTTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCCTGACCACTAGCTAATCAGACGCGAGCCCCTCTTTGGGCAGATTCTTCATTTTACTCCTCATCGTACGAGGTATTTGCAGCCGTTTCCAGCTGTTGTTCCCCTCTCAAGGGTAGGTTCTTATGCGTTATTCATCCGTCCGCCACTGGAAACACCACTTCCTGTCCGACTTGCATGTGTTAAGCATGCCAGAAACATTCATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATAGTTGCATTACTTATAGCTTCCTTGTTTGTAGACAAAGCTAATTCGGAATTGTCTTTCATTCCAAGGCATAACTTGTATCCATGCGCTTCATATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCATCCCCACCATCTAACGTTAATCCCATGAGCCTCTTATCCATTCTCATTCGATCACGGCGGGGGAGCAAGTCAAAATAGAAAAACTCACATTGGATTTAGAGATAATCAGGCTCGAACTGATGACTTCTGCGAGTTATATCCCTTCCCTTGCCCCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGTCGAGAAACTCAATGCCACTATTCTTGAACAACTTGGAATTGGGCCTTCCTTCTTTTTGAATTATTACAGATACGAAAATGAAAATAATGGGCAAAATTGGATTCAATTGTCAACAGCTCCTATCGTAAATAGGATTGACTATGGATTCGAGCCATAGCACACGGTTTCATAAAGCCGTACGATTTTCCCGGTCTAAATAAAGCAGGTTTTACATGAAGAAGATTTGGCCCAGCATGTTCTATTTGATACGGATAGGAAAAAAACCTAACTCGGTATTATTAAAAAAATAGAGAAATCAGAACCCAGTCAAGATGATATGGATCAACCCCTTCTTCTTGTGCCAAAGATCTTACCATTTCCGAAGGAACTTGAGTTACATCTCTTTTCCATTTCCATTCCAGAGTTTTTATGTGTTTCCACACCCCTTCGAGACCCCGAAAAATGAACAACTTTTCTTTGGAACACATACAAGATTCGTCATGGAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATAGTAATAGAAATACATGTCCTACCCCGACAAAATTTGTAACTTGCTATCCTCTTGCCTAACAGGCAAAGATTTACCTTCGTTGAAAGGATGATTCATTCGGATCAACATGAGAGTCCAACTACATTGCATTGCCAAAATCCATGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATGTTACAATTCTCTTCCCGCCAAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGGTGCCAACAGTTCATCACGAAAGAAAGGACTCACTAAGCCGAGATTACTAACTAATACTAATCTAATACTAATAGAATAGAAAAGAACTGTCTTTTCTGTATACTTTCCCCGGTTCCGTTGCTACCGCGGGCTTTACGCAATCAATCGGATCATATAGATATCCCTTCAACACAACATAGGTCAGTGAAAGGATCTTGGAGACCCACCAAAGCACGAAAGCCAGAATCTTTCAGAAAATGGATTCCTATTTGAAAAGTGCATAACCGCATGGATAAGCTCACACTAACCCATCAATTTTAGATCCAATTCAAAATTTTCCTTGGGAGGTATTGGGAAGGAATTGGAATGTAATAATATCGATTCATACAAATACAGAAGTAAAGGTTCTCTATTAATTCAAACACTATACCCGTGGGATAGGGATAGAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATATGATTTATTTCGTACCTTTCGCTCAATGAAAAAATGGGCCAGATTCTACAGGATCAAACCTATGGGACTTAAGGAATGATCGAAGGGAATAAAAAAAAAGAGGGAAAAATAAGTAAATAAAAATGACGTAGAAGAGCCTAGATTCCAAATGAATGAAAACGTGACTGAATTGGTCCTGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCAAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAACGAAGAGCCGTATGAGGTGAAAATCTCACGTACGGTTCTGTCGAGTGGCAGTAAGGGTGACTTATCTATCAACTTTTCCACTATCACCCCTAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAATATTTTGTAGTCTTAGTAAGAGGGGAAAGGGTTAAGGATTTACCCAATGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG

mRNA sequence

GTCCTGACACAGGTGCAGGACCGTACCAACTTCTTGACCTTCCGGCACTGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTTGCGGAGACCTGTGTTTTTGGTATTTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGCGCATTCGACTCGCTTTCGCTACGGCTCGGCACGCGCGGTATCCACCAAAAACTTTCTCCGGACCTCCGGGAAAAGCATGAAAAAAAAAGGCTCGAATGATACATTGAGAACACTCTGCTCAGGGTTCCAACCTCAACGAGGATTCGCGGCATGTCAAGCCCTGATACCGTCATTGTTTCTTCTCCGGGAAAAGAAGTTCACGACCCGACTACTGATCATCGCCTTGATTCTTCATTTTACTCCTCATCGTACGAGTAAGGGTGACTTATCTATCAACTTTTCCACTATCACCCCTAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAATATTTTGTAGTCTTAGTAAGAGGGGAAAGGGTTAAGGATTTACCCAATGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG

Coding sequence (CDS)

GTCCTGACACAGGTGCAGGACCGTACCAACTTCTTGACCTTCCGGCACTGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTTGCGGAGACCTGTGTTTTTGGTATTTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGCGCATTCGACTCGCTTTCGCTACGGCTCGGCACGCGCGGTATCCACCAAAAACTTTCTCCGGACCTCCGGGAAAAGCATGAAAAAAAAAGGCTCGAATGATACATTGAGAACACTCTGCTCAGGGTTCCAACCTCAACGAGGATTCGCGGCATGTCAAGCCCTGATACCGTCATTGTTTCTTCTCCGGGAAAAGAAGTTCACGACCCGACTACTGATCATCGCCTTGATTCTTCATTTTACTCCTCATCGTACGAGTAAGGGTGACTTATCTATCAACTTTTCCACTATCACCCCTAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAATATTTTGTAGTCTTAGTAAGAGGGGAAAGGGTTAAGGATTTACCCAATGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG

Protein sequence

VLTQVQDRTNFLTFRHWQASAPIHGLTTFAETCVFGISLPTHLCRFRVQAHSTRFRYGSARAVSTKNFLRTSGKSMKKKGSNDTLRTLCSGFQPQRGFAACQALIPSLFLLREKKFTTRLLIIALILHFTPHRTSKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIVRGTLDAVGVKDRQQGRSSAL
Homology
[Close]
BLAST of Bhi10G001651 vs. TAIR10
Match: ATCG00065.1 (ribosomal protein S12A)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRS 222
           RGTLDAVGVKDRQQGRS
Sbjct: 99  RGTLDAVGVKDRQQGRS 115

[Close]
BLAST of Bhi10G001651 vs. TAIR10
Match: ATCG01230.1 (ribosomal protein S12B)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRS 222
           RGTLDAVGVKDRQQGRS
Sbjct: 99  RGTLDAVGVKDRQQGRS 115

[Close]
BLAST of Bhi10G001651 vs. TAIR10
Match: ATCG00905.1 (ribosomal protein S12C)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRS 222
           RGTLDAVGVKDRQQGRS
Sbjct: 99  RGTLDAVGVKDRQQGRS 115

[Close]
BLAST of Bhi10G001651 vs. TAIR10
Match: AT2G07675.1 (Ribosomal protein S12/S23 family protein)

HSP 1 Score: 94.7 bits (234), Expect = 7.5e-20
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0 

Query: 144 STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHI 203
           ST TPKKPNSA RK+A+VRL++  +I A+IPG GHN QE+  VL+RG RVKD P V+ H 
Sbjct: 38  STRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHC 97

Query: 204 VRGTLDAVGVKDRQQGRS 222
           +RG  D +G+  R++GRS
Sbjct: 98  IRGVKDLMGIPGRRRGRS 115

[Close]
BLAST of Bhi10G001651 vs. TAIR10
Match: ATMG00980.1 (Ribosomal protein S12/S23 family protein)

HSP 1 Score: 94.7 bits (234), Expect = 7.5e-20
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0 

Query: 144 STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHI 203
           ST TPKKPNSA RK+A+VRL++  +I A+IPG GHN QE+  VL+RG RVKD P V+ H 
Sbjct: 38  STRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHC 97

Query: 204 VRGTLDAVGVKDRQQGRS 222
           +RG  D +G+  R++GRS
Sbjct: 98  IRGVKDLMGIPGRRRGRS 115

[Close]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match: sp|A4GYN8|RR12B_POPTR (30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps12-B PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.1e-39
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QE+ VVLVRG RVK
Sbjct: 41  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVK 100

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRS 222
           DLP VRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 101 DLPGVRYHIVRGTLDAVGVKDRQQGRS 127

[Close]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match: sp|A4QJX7|RR12B_OLIPU (30S ribosomal protein S12-B, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=rps12-B PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-35
Identity = 81/112 (72.32%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 110 LLREKKFTTRLLIIALILHFTPHRTSKGDLSINFSTITPKKPNSALRKVARVRLTSGFEI 169
           L+R  +   R +  +  L   P R  +G  +  +STITPKKPNSALRKVARVRLTSGFEI
Sbjct: 7   LIRNTRQPIRNVTKSPALRGCPQR--RGTCTRVYSTITPKKPNSALRKVARVRLTSGFEI 66

Query: 170 TAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIVRGTLDAVGVKDRQQGRS 222
           TAYIPGIGHNLQE+ VVLVRG RVKDLP VRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 67  TAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 116

[Close]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match: sp|Q1KXY0|RR12_HELAN (30S ribosomal protein S12, chloroplastic OS=Helianthus annuus OX=4232 GN=rps12-A PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRSSAL 225
           RGTLDAVGVKDRQQGRSSAL
Sbjct: 99  RGTLDAVGVKDRQQGRSSAL 118

[Close]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match: sp|Q332V3|RR12_LACSA (30S ribosomal protein S12, chloroplastic OS=Lactuca sativa OX=4236 GN=rps12-A PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRSSAL 225
           RGTLDAVGVKDRQQGRSSAL
Sbjct: 99  RGTLDAVGVKDRQQGRSSAL 118

[Close]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match: sp|Q0G9J5|RR12_LIRTU (30S ribosomal protein S12, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=rps12-A PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 145 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVKDLPNVRYHIV 204
           TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QE+ VVLVRG RVKDLP VRYHIV
Sbjct: 39  TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIV 98

Query: 205 RGTLDAVGVKDRQQGRSSAL 225
           RGTLDAVGVKDRQQGRSSAL
Sbjct: 99  RGTLDAVGVKDRQQGRSSAL 118

[Close]
BLAST of Bhi10G001651 vs. TrEMBL
Match: tr|A0A286NG09|A0A286NG09_CUCME (Ribosomal protein S12 OS=Cucumis melo var. flexuosus OX=1120798 GN=rps12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 55  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 114

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 115 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 144

[Close]
BLAST of Bhi10G001651 vs. TrEMBL
Match: tr|A0A249RXJ8|A0A249RXJ8_CUCME (Ribosomal protein S12 OS=Cucumis melo subsp. agrestis OX=217619 GN=rps12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 55  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 114

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 115 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 144

[Close]
BLAST of Bhi10G001651 vs. TrEMBL
Match: tr|A0A249RX37|A0A249RX37_9ROSI (Ribosomal protein S12 OS=Citrullus amarus OX=1567104 GN=rps12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 55  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 114

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 115 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 144

[Close]
BLAST of Bhi10G001651 vs. TrEMBL
Match: tr|A0A249RYK9|A0A249RYK9_CUCME (Ribosomal protein S12 OS=Cucumis melo var. makuwa OX=1194695 GN=rps12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 55  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 114

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 115 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 144

[Close]
BLAST of Bhi10G001651 vs. TrEMBL
Match: tr|A0A286SB54|A0A286SB54_CUCSA (Ribosomal protein S12 OS=Cucumis sativus var. hardwickii OX=319220 GN=rps12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 55  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 114

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 115 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 144

[Close]
BLAST of Bhi10G001651 vs. NCBI nr
Match: XP_007157192.1 (hypothetical protein PHAVU_002G050200g, partial [Phaseolus vulgaris] >ESW29186.1 hypothetical protein PHAVU_002G050200g, partial [Phaseolus vulgaris])

HSP 1 Score: 170.2 bits (430), Expect = 7.7e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 3   SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 62

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 63  DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92

[Close]
BLAST of Bhi10G001651 vs. NCBI nr
Match: CDY63601.1 (BnaUnng00880D [Brassica napus])

HSP 1 Score: 170.2 bits (430), Expect = 7.7e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 60  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 119

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 120 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 149

[Close]
BLAST of Bhi10G001651 vs. NCBI nr
Match: CDY19672.1 (BnaC09g29280D [Brassica napus] >PKU32147.1 ribosomal protein s12 [Limosa lapponica baueri])

HSP 1 Score: 170.2 bits (430), Expect = 7.7e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 60  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 119

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 120 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 149

[Close]
BLAST of Bhi10G001651 vs. NCBI nr
Match: YP_009128437.1 (ribosomal protein S12 (chloroplast) [Ipomoea batatas] >YP_009128460.1 ribosomal protein S12 (chloroplast) [Ipomoea batatas] >AJP09609.1 ribosomal protein S12 (chloroplast) [Ipomoea batatas] >AJP09632.1 ribosomal protein S12 (chloroplast) [Ipomoea batatas])

HSP 1 Score: 170.2 bits (430), Expect = 7.7e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 24  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 83

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 84  DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 113

[Close]
BLAST of Bhi10G001651 vs. NCBI nr
Match: XP_019241890.1 (PREDICTED: uncharacterized protein LOC109221914 [Nicotiana attenuata])

HSP 1 Score: 170.2 bits (430), Expect = 7.7e-39
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 135 SKGDLSINFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEYFVVLVRGERVK 194
           SKGDLS+NFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE+ VVLVRG RVK
Sbjct: 27  SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 86

Query: 195 DLPNVRYHIVRGTLDAVGVKDRQQGRSSAL 225
           DLP VRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 87  DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 116

The following BLAST results are available for this feature:
BLAST of Bhi10G001651 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00065.12.2e-3594.81ribosomal protein S12A[more]
ATCG01230.12.2e-3594.81ribosomal protein S12B[more]
ATCG00905.12.2e-3594.81ribosomal protein S12C[more]
AT2G07675.17.5e-2057.69Ribosomal protein S12/S23 family protein[more]
ATMG00980.17.5e-2057.69Ribosomal protein S12/S23 family protein[more]
BLAST of Bhi10G001651 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A4GYN8|RR12B_POPTR3.1e-3993.1030S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps... [more]
sp|A4QJX7|RR12B_OLIPU4.6e-3572.3230S ribosomal protein S12-B, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN... [more]
sp|Q1KXY0|RR12_HELAN6.0e-3593.7530S ribosomal protein S12, chloroplastic OS=Helianthus annuus OX=4232 GN=rps12-A... [more]
sp|Q332V3|RR12_LACSA6.0e-3593.7530S ribosomal protein S12, chloroplastic OS=Lactuca sativa OX=4236 GN=rps12-A PE... [more]
sp|Q0G9J5|RR12_LIRTU6.0e-3593.7530S ribosomal protein S12, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=r... [more]
BLAST of Bhi10G001651 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A286NG09|A0A286NG09_CUCME5.1e-3994.44Ribosomal protein S12 OS=Cucumis melo var. flexuosus OX=1120798 GN=rps12 PE=3 SV... [more]
tr|A0A249RXJ8|A0A249RXJ8_CUCME5.1e-3994.44Ribosomal protein S12 OS=Cucumis melo subsp. agrestis OX=217619 GN=rps12 PE=3 SV... [more]
tr|A0A249RX37|A0A249RX37_9ROSI5.1e-3994.44Ribosomal protein S12 OS=Citrullus amarus OX=1567104 GN=rps12 PE=3 SV=1[more]
tr|A0A249RYK9|A0A249RYK9_CUCME5.1e-3994.44Ribosomal protein S12 OS=Cucumis melo var. makuwa OX=1194695 GN=rps12 PE=3 SV=1[more]
tr|A0A286SB54|A0A286SB54_CUCSA5.1e-3994.44Ribosomal protein S12 OS=Cucumis sativus var. hardwickii OX=319220 GN=rps12 PE=3... [more]
BLAST of Bhi10G001651 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_007157192.17.7e-3994.44hypothetical protein PHAVU_002G050200g, partial [Phaseolus vulgaris] >ESW29186.1... [more]
CDY63601.17.7e-3994.44BnaUnng00880D [Brassica napus][more]
CDY19672.17.7e-3994.44BnaC09g29280D [Brassica napus] >PKU32147.1 ribosomal protein s12 [Limosa lapponi... [more]
YP_009128437.17.7e-3994.44ribosomal protein S12 (chloroplast) [Ipomoea batatas] >YP_009128460.1 ribosomal ... [more]
XP_019241890.17.7e-3994.44PREDICTED: uncharacterized protein LOC109221914 [Nicotiana attenuata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR005679Ribosomal_S12_bac
IPR006032Ribosomal_S12/S23
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042773 ATP synthesis coupled electron transport
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001651Bhi10M001651mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 216..224
score: 32.37
coord: 164..183
score: 70.21
coord: 200..216
score: 64.3
coord: 148..163
score: 91.32
coord: 183..200
score: 66.98
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 139..219
e-value: 1.8E-25
score: 88.6
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 132..222
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 149..156
IPR005679Ribosomal protein S12, bacterial-typeTIGRFAMTIGR00981TIGR00981coord: 138..221
e-value: 1.8E-41
score: 138.9
IPR005679Ribosomal protein S12, bacterial-typeCDDcd03368Ribosomal_S12coord: 145..216
e-value: 5.39041E-46
score: 149.591
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 129..224
e-value: 2.9E-40
score: 138.9
NoneNo IPR availablePANTHERPTHR11652:SF128S RIBOSOMAL PROTEIN S12, MITOCHONDRIALcoord: 132..222
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 139..221

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G001651Wax gourdwgowgoB101
Bhi10G001651Cucumber (Gy14) v1cgywgoB149
Bhi10G001651Cucumber (Gy14) v1cgywgoB173
Bhi10G001651Cucumber (Gy14) v1cgywgoB488
Bhi10G001651Cucumber (Gy14) v2cgybwgoB175
Bhi10G001651Cucumber (Gy14) v2cgybwgoB576
Bhi10G001651Cucumber (Gy14) v2cgybwgoB656
Bhi10G001651Cucurbita maxima (Rimu)cmawgoB0684
Bhi10G001651Cucurbita maxima (Rimu)cmawgoB0745
Bhi10G001651Cucurbita moschata (Rifu)cmowgoB0679
Bhi10G001651Cucurbita moschata (Rifu)cmowgoB0736
Bhi10G001651Cucurbita pepo (Zucchini)cpewgoB0363
Bhi10G001651Cucurbita pepo (Zucchini)cpewgoB0864
Bhi10G001651Cucurbita pepo (Zucchini)cpewgoB0958
Bhi10G001651Wild cucumber (PI 183967)cpiwgoB181
Bhi10G001651Wild cucumber (PI 183967)cpiwgoB609
Bhi10G001651Wild cucumber (PI 183967)cpiwgoB696
Bhi10G001651Cucumber (Chinese Long) v3cucwgoB187
Bhi10G001651Cucumber (Chinese Long) v3cucwgoB709
Bhi10G001651Cucumber (Chinese Long) v2cuwgoB182
Bhi10G001651Cucumber (Chinese Long) v2cuwgoB603
Bhi10G001651Cucumber (Chinese Long) v2cuwgoB684
Bhi10G001651Bottle gourd (USVL1VR-Ls)lsiwgoB080
Bhi10G001651Bottle gourd (USVL1VR-Ls)lsiwgoB165
Bhi10G001651Melon (DHL92) v3.6.1medwgoB117
Bhi10G001651Melon (DHL92) v3.6.1medwgoB232
Bhi10G001651Melon (DHL92) v3.5.1mewgoB116
Bhi10G001651Melon (DHL92) v3.5.1mewgoB231
Bhi10G001651Watermelon (Charleston Gray)wcgwgoB056
Bhi10G001651Watermelon (Charleston Gray)wcgwgoB221
Bhi10G001651Watermelon (97103) v2wgowmbB344
Bhi10G001651Watermelon (97103) v2wgowmbB393
Bhi10G001651Watermelon (97103) v1wgowmB358
Bhi10G001651Watermelon (97103) v1wgowmB383
Bhi10G001651Silver-seed gourdcarwgoB0931
Bhi10G001651Silver-seed gourdcarwgoB1037