Bhi10G001468 (gene) Wax gourd

Overview
NameBhi10G001468
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCCR4-NOT transcription complex subunit 7
Locationchr10 : 46336916 .. 46337446 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCATTAGATTATTCGCTGCAAATTTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGGACTCTACGATATTGGGTATCTGATCAAAGTGATGGGTTTGATCACCGTCTTGCCAGAATCAATGGAGGAATTTGCGACAGTGGTAGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATGGGGAACTTGGGCTTCAAAGACTAGGGTATTTGCTTAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTGCTCACAGCTTCTGCGCATTTTGAGATGATCCATCGATTTGATATGGATTCAGTGGTTTGTGATGAATTCTTGTATGGTTTTTCAAATAACCTTGAATCTATGGAGATGAAGATGAAGATGAAGATGAAGGTCTATCAGCCGAAGATGATTAGATTTGGTCAAATTCCATATGCAATCCCACTTTTTTGTTATACTCCTTATTATGTTGCTTATTGA

mRNA sequence

ATGCCCATTAGATTATTCGCTGCAAATTTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGGACTCTACGATATTGGGTATCTGATCAAAGTGATGGGTTTGATCACCGTCTTGCCAGAATCAATGGAGGAATTTGCGACAGTGGTAGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATGGGGAACTTGGGCTTCAAAGACTAGGGTATTTGCTTAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTGCTCACAGCTTCTGCGCATTTTGAGATGATCCATCGATTTGATATGGATTCAGTGGTTTGTGATGAATTCTTGTATGGTTTTTCAAATAACCTTGAATCTATGGAGATGAAGATGAAGATGAAGATGAAGGTCTATCAGCCGAAGATGATTAGATTTGGTCAAATTCCATATGCAATCCCACTTTTTTGTTATACTCCTTATTATGTTGCTTATTGA

Coding sequence (CDS)

ATGCCCATTAGATTATTCGCTGCAAATTTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGGACTCTACGATATTGGGTATCTGATCAAAGTGATGGGTTTGATCACCGTCTTGCCAGAATCAATGGAGGAATTTGCGACAGTGGTAGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATGGGGAACTTGGGCTTCAAAGACTAGGGTATTTGCTTAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTGCTCACAGCTTCTGCGCATTTTGAGATGATCCATCGATTTGATATGGATTCAGTGGTTTGTGATGAATTCTTGTATGGTTTTTCAAATAACCTTGAATCTATGGAGATGAAGATGAAGATGAAGATGAAGGTCTATCAGCCGAAGATGATTAGATTTGGTCAAATTCCATATGCAATCCCACTTTTTTGTTATACTCCTTATTATGTTGCTTATTGA

Protein sequence

MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDSVVCDEFLYGFSNNLESMEMKMKMKMKVYQPKMIRFGQIPYAIPLFCYTPYYVAY
Homology
[Close]
BLAST of Bhi10G001468 vs. TAIR10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16
Identity = 53/137 (38.69%), Postives = 71/137 (51.82%), Query Frame = 0 

Query: 3   IRLFAANFLP----IIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNG 62
           + +F   F P    + R      +VTF G YD  Y + ++     LPE+  EFAT VV  
Sbjct: 124 VDMFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKV 183

Query: 63  LGIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRF 122
            G V D K MA FCEGL +  LGL +L  LL   R G  H+AGSDSL+TA    ++ H +
Sbjct: 184 FGQVYDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY 243

Query: 123 DMDSVVCDEFLYGFSNN 136
           + DS      +YG   +
Sbjct: 244 E-DSRFARGLIYGIGKS 257

[Close]
BLAST of Bhi10G001468 vs. TAIR10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-14
Identity = 54/121 (44.63%), Postives = 66/121 (54.55%), Query Frame = 0 

Query: 3   IRLFAANFLPII-RKHNVFRWVTFHGLYDIGYLIKVMGLI-TVLPESMEEFATVVVNGLG 62
           I  F   F  I+  KH   RWVTF G YD  YL+K  GL    LPE+ +EF   V   LG
Sbjct: 117 IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLK--GLTRKPLPETSKEFDETVQQLLG 176

Query: 63  -IVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 121
             V D+K MA  C GL     GLQR+  +L  +R G  H+AGSDS LTA    ++I  FD
Sbjct: 177 RFVYDVKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI--FD 232

[Close]
BLAST of Bhi10G001468 vs. TAIR10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 6   FAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDL 65
           F+  F  + +      WVTFHG YDI YL+K       LP + E F+  V   LG V DL
Sbjct: 109 FSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDL 168

Query: 66  KHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDM 121
           K MA  CEGL    LGL+ L +     R G+ H+AGS++ LTA    +++  F +
Sbjct: 169 KVMAGRCEGL-SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]
BLAST of Bhi10G001468 vs. TAIR10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 7.0e-13
Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 0 

Query: 22  WVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDLKHMARFCEGLEDGELG 81
           WVTFH  YD GYL+K++     LPE + +F   +     +V D+K++  FC  L     G
Sbjct: 168 WVTFHCGYDFGYLLKLLS-GKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYG---G 227

Query: 82  LQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDSVV-CDEFLYGFSN 135
           L+++  LL  KR G  H AGSDSLLT     +M   F   S++    FL+G  N
Sbjct: 228 LEKIAELLGVKRVGISHQAGSDSLLTLRTFIKMKEFFFTGSLLKYSGFLFGLDN 277

[Close]
BLAST of Bhi10G001468 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0 

Query: 13  IIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDLKHMARFC 72
           I+   NV  WVTFH  YD GYL+K++     LP+S  +F  ++      V D+KH+ +FC
Sbjct: 150 IVLNENV-HWVTFHSGYDFGYLLKLL-TCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFC 209

Query: 73  EGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRF 119
             L     GL +L  LL  +R G  H AGSDSLLT+    ++   F
Sbjct: 210 NSLHG---GLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENF 250

[Close]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match: sp|Q9SHJ0|CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-15
Identity = 53/137 (38.69%), Postives = 71/137 (51.82%), Query Frame = 0 

Query: 3   IRLFAANFLP----IIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNG 62
           + +F   F P    + R      +VTF G YD  Y + ++     LPE+  EFAT VV  
Sbjct: 124 VDMFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKV 183

Query: 63  LGIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRF 122
            G V D K MA FCEGL +  LGL +L  LL   R G  H+AGSDSL+TA    ++ H +
Sbjct: 184 FGQVYDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY 243

Query: 123 DMDSVVCDEFLYGFSNN 136
           + DS      +YG   +
Sbjct: 244 E-DSRFARGLIYGIGKS 257

[Close]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match: sp|O64773|CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-13
Identity = 54/121 (44.63%), Postives = 66/121 (54.55%), Query Frame = 0 

Query: 3   IRLFAANFLPII-RKHNVFRWVTFHGLYDIGYLIKVMGLI-TVLPESMEEFATVVVNGLG 62
           I  F   F  I+  KH   RWVTF G YD  YL+K  GL    LPE+ +EF   V   LG
Sbjct: 117 IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLK--GLTRKPLPETSKEFDETVQQLLG 176

Query: 63  -IVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 121
             V D+K MA  C GL     GLQR+  +L  +R G  H+AGSDS LTA    ++I  FD
Sbjct: 177 RFVYDVKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI--FD 232

[Close]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match: sp|Q9LXM4|CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 6   FAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDL 65
           F+  F  + +      WVTFHG YDI YL+K       LP + E F+  V   LG V DL
Sbjct: 109 FSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDL 168

Query: 66  KHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDM 121
           K MA  CEGL    LGL+ L +     R G+ H+AGS++ LTA    +++  F +
Sbjct: 169 KVMAGRCEGL-SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match: sp|Q9S9P2|CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 0 

Query: 22  WVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDLKHMARFCEGLEDGELG 81
           WVTFH  YD GYL+K++     LPE + +F   +     +V D+K++  FC  L     G
Sbjct: 168 WVTFHCGYDFGYLLKLLS-GKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYG---G 227

Query: 82  LQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDSVV-CDEFLYGFSN 135
           L+++  LL  KR G  H AGSDSLLT     +M   F   S++    FL+G  N
Sbjct: 228 LEKIAELLGVKRVGISHQAGSDSLLTLRTFIKMKEFFFTGSLLKYSGFLFGLDN 277

[Close]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match: sp|Q3KQ85|CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis OX=8355 GN=cnot7 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 38/103 (36.89%), Postives = 61/103 (59.22%), Query Frame = 0 

Query: 21  RWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIVRDLKHMARFCEGLEDGEL 80
           +W++FH  YD GYLIK++   + LPE  ++F  ++     ++ D+K++ + C+ L+    
Sbjct: 152 KWLSFHSGYDFGYLIKIL-TNSNLPEVEQDFFEILRLFFPVIYDVKYLMKSCKNLKG--- 211

Query: 81  GLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDSV 124
           GLQ +   L  +R G +H AGSDSLLT  A F+M   F  D +
Sbjct: 212 GLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI 250

[Close]
BLAST of Bhi10G001468 vs. TrEMBL
Match: tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.9e-54
Identity = 112/176 (63.64%), Postives = 134/176 (76.14%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLG 60
           +PI  F   FLPI+RK ++FRWVTFHGLYDIGYLIK MGLITVLP+SMEEFATVVVN +G
Sbjct: 131 IPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 190

Query: 61  IVRDLKHMARFCEGLED-GELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 120
           IVRDLKHMA+FCEGL+D G LGL+RLG LLN KRFG KHNAGSDSLLTASAH EM+ RF 
Sbjct: 191 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 250

Query: 121 MDSVVCDEFLYGFSNNLESMXXXXXXXXXXYQPKMIRFGQIPYAIPLFCYTPYYVA 176
           M+S VC+ FLYGFS  LESM           + K+     + +++ + CY  +Y++
Sbjct: 251 MNSKVCNGFLYGFSETLESM-------KMKMKMKICHHNILRFSLYIPCYFVFYMS 299

[Close]
BLAST of Bhi10G001468 vs. TrEMBL
Match: tr|A0A1S3BY95|A0A1S3BY95_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494884 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 64/132 (48.48%), Postives = 82/132 (62.12%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLG 60
           +P   F   FLPI   + + +W+TFHG+YD+ YL+K+M +I  +PESM EFA +    LG
Sbjct: 120 IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-MIRTMPESMVEFAIIAQRHLG 179

Query: 61  IVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDM 120
            V DLKHM R CE L +GELGL+RL  LLN     +  N GSDSLL A A+ +M      
Sbjct: 180 TVNDLKHMIRNCEYLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKF 239

Query: 121 DSVVCDEFLYGF 133
            S + D FLYGF
Sbjct: 240 SSEITDGFLYGF 248

[Close]
BLAST of Bhi10G001468 vs. TrEMBL
Match: tr|V4TLB7|V4TLB7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016106mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNV-FRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGL 60
           +P  +FA  FL ++ KH    +WVTFHGLYD+ YL+K+      LP + E F+ V     
Sbjct: 122 IPRCVFAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFF 181

Query: 61  GIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 120
             V D+K +A +C+GL+  +LGL +L  +LN KR G  H+AGSDSLLTA+   EM +R++
Sbjct: 182 QSVFDIKVVAGYCQGLQGLKLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYE 241

Query: 121 MDSVVCDEFLYGFSNNLES 139
           ++    D FLYG  + +ES
Sbjct: 242 LEESAFDGFLYGLDSRIES 259

[Close]
BLAST of Bhi10G001468 vs. TrEMBL
Match: tr|A0A2H5PHB6|A0A2H5PHB6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136660 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNV-FRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGL 60
           +P  +FA  FL ++ KH    +WVTFHGLYD+ YL+K+      LP + E F+ V     
Sbjct: 122 IPRCVFAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFF 181

Query: 61  GIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 120
             V D+K +A +C+GL+  +LGL +L  +LN KR G  H+AGSDSLLTA+   EM +R++
Sbjct: 182 QSVFDIKVVAGYCQGLQGLKLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYE 241

Query: 121 MDSVVCDEFLYGFSNNLES 139
           ++    D FLYG  + +ES
Sbjct: 242 LEESAFDGFLYGLDSRIES 259

[Close]
BLAST of Bhi10G001468 vs. TrEMBL
Match: tr|A0A067ETV6|A0A067ETV6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038950mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-22
Identity = 59/138 (42.75%), Postives = 86/138 (62.32%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNV-FRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGL 60
           +P  +FA  FL ++ KH    +WVTFHGLYD+ YL+K+      LP + E F+ V     
Sbjct: 122 IPRCVFAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFF 181

Query: 61  GIVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 120
             V D+K +A +C+GL+  +LGL +L  +LN KR G  H+AGSDSLLTA+   EM +R++
Sbjct: 182 QSVFDIKVVAGYCQGLQGLKLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYE 241

Query: 121 MDSVVCDEFLYGFSNNLE 138
           ++    D FLYG  + +E
Sbjct: 242 LEESAFDGFLYGMDSRIE 258

[Close]
BLAST of Bhi10G001468 vs. NCBI nr
Match: XP_004147072.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_2G270190 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 112/176 (63.64%), Postives = 134/176 (76.14%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLG 60
           +PI  F   FLPI+RK ++FRWVTFHGLYDIGYLIK MGLITVLP+SMEEFATVVVN +G
Sbjct: 131 IPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 190

Query: 61  IVRDLKHMARFCEGLED-GELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFD 120
           IVRDLKHMA+FCEGL+D G LGL+RLG LLN KRFG KHNAGSDSLLTASAH EM+ RF 
Sbjct: 191 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 250

Query: 121 MDSVVCDEFLYGFSNNLESMXXXXXXXXXXYQPKMIRFGQIPYAIPLFCYTPYYVA 176
           M+S VC+ FLYGFS  LESM           + K+     + +++ + CY  +Y++
Sbjct: 251 MNSKVCNGFLYGFSETLESM-------KMKMKMKICHHNILRFSLYIPCYFVFYMS 299

[Close]
BLAST of Bhi10G001468 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 2.8e-44
Identity = 98/176 (55.68%), Postives = 122/176 (69.32%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLG 60
           +PI  F +    + RKH + RWVTFHGLYDIGYL+K MG+   +PESMEEFA +V   LG
Sbjct: 131 IPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALG 190

Query: 61  IVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDM 120
            V DLKHMA+FCEGLEDG+LGL++L  L+NQKRFG+KH+AGSDSLLTAS + +M ++F++
Sbjct: 191 NVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFEL 250

Query: 121 DSVVCDEFLYGFSNNLESMXXXXXXXXXXYQPKMIRFGQIPYAIPLFCYTPYYVAY 177
            S VCD FLYG    L +           YQ  M  FGQIPY +   CY P Y+AY
Sbjct: 251 GSEVCDGFLYGLRIKLHA-------KIKLYQNLM--FGQIPYGLRA-CYPPCYIAY 296

[Close]
BLAST of Bhi10G001468 vs. NCBI nr
Match: XP_023533172.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.6 bits (449), Expect = 3.8e-41
Identity = 82/135 (60.74%), Postives = 103/135 (76.30%), Query Frame = 0 

Query: 3   IRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIV 62
           +R FA  FL  IRKH ++RWVTFHGLYDIGYL+  MG++  LPE++ EF  +V   +G V
Sbjct: 132 VRKFAIRFLYTIRKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFEWIVARRVGTV 191

Query: 63  RDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDS 122
           RDLKHMARFCEGLE G LGL++LG LL+QKRFG KH+AGSDSL+TA  H +M+ R+D ++
Sbjct: 192 RDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDFNA 251

Query: 123 VVCDEFLYGFSNNLE 138
            +CD FLYG S   E
Sbjct: 252 EICDGFLYGLSKKFE 266

[Close]
BLAST of Bhi10G001468 vs. NCBI nr
Match: XP_022947868.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 4.2e-40
Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 3   IRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLGIV 62
           +R FA  FL  + KH ++RWVTFHGLYDIGYL+  MG++  LPE++ EF  +V   +G V
Sbjct: 132 VRKFAIRFLYTLGKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFKWIVARRVGTV 191

Query: 63  RDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDMDS 122
           RDLKHMARFCEGLE G LGL++LG LL+QKRFG KH+AGSDSL+TA  H +M+ R+D  +
Sbjct: 192 RDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDFHA 251

Query: 123 VVCDEFLYGFSNNLESM 140
            +CD FLYG S   E +
Sbjct: 252 EICDGFLYGLSKKFEEL 268

[Close]
BLAST of Bhi10G001468 vs. NCBI nr
Match: XP_022947867.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 171.0 bits (432), Expect = 3.6e-39
Identity = 83/139 (59.71%), Postives = 102/139 (73.38%), Query Frame = 0 

Query: 1   MPIRLFAANFLPIIRKHNVFRWVTFHGLYDIGYLIKVMGLITVLPESMEEFATVVVNGLG 60
           +P+ LF  NF  IIR+  V +WVTFHGLYDIGYL+K MG+   LPESMEEFA +V  G+G
Sbjct: 131 IPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG 190

Query: 61  IVRDLKHMARFCEGLEDGELGLQRLGYLLNQKRFGSKHNAGSDSLLTASAHFEMIHRFDM 120
           +VRDLK +AR+CEGLE G +GL+RLG LL +KRFG KH+AGSDSLLTA  H +M   F +
Sbjct: 191 VVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRL 250

Query: 121 DSVVCDEFLYGFSNNLESM 140
           +S   D  LYG  N L+ M
Sbjct: 251 ESEAYDGHLYGLRNKLQYM 269

The following BLAST results are available for this feature:
BLAST of Bhi10G001468 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06450.12.3e-1638.69Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G61470.12.2e-1444.63Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44240.11.8e-1339.13Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.27.0e-1338.60Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.31.2e-1239.62Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Bhi10G001468 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHJ0|CAF1A_ARATH4.2e-1538.69Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|O64773|CAF1E_ARATH3.9e-1344.63Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9LXM4|CAF1H_ARATH3.3e-1239.13Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9S9P2|CAF1B_ARATH1.3e-1138.60Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q3KQ85|CNOT7_XENLA1.6e-1136.89CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis OX=8355 GN=cnot7 PE=1... [more]
BLAST of Bhi10G001468 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA9.9e-5463.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1[more]
tr|A0A1S3BY95|A0A1S3BY95_CUCME1.8e-2348.48putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494... [more]
tr|V4TLB7|V4TLB7_9ROSI1.5e-2243.17Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016106mg PE=4 ... [more]
tr|A0A2H5PHB6|A0A2H5PHB6_CITUN1.5e-2243.17Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136660 PE=4 SV=1[more]
tr|A0A067ETV6|A0A067ETV6_CITSI4.5e-2242.75Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038950mg PE=4 SV=1[more]
BLAST of Bhi10G001468 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147072.11.5e-5363.64PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN619... [more]
XP_022146113.12.8e-4455.68putative CCR4-associated factor 1 homolog 8 [Momordica charantia][more]
XP_023533172.13.8e-4160.74putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo][more]
XP_022947868.14.2e-4058.39putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata][more]
XP_022947867.13.6e-3959.71putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
biological_process GO:0017148 negative regulation of translation
biological_process GO:0008150 biological_process
cellular_component GO:0030015 CCR4-NOT core complex
cellular_component GO:0000932 cytoplasmic mRNA processing body
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001468Bhi10M001468mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 3..132
e-value: 1.3E-25
score: 92.1
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 6..157
NoneNo IPR availablePANTHERPTHR10797:SF16CCR4-ASSOCIATED FACTOR 1 HOMOLOG 1-RELATEDcoord: 6..157
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 20..119

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi10G001468CmaCh02G002510Cucurbita maxima (Rimu)cmawgoB0760
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G001468Wax gourdwgowgoB068
Bhi10G001468Cucumber (Gy14) v1cgywgoB463
Bhi10G001468Cucumber (Gy14) v1cgywgoB745
Bhi10G001468Cucumber (Gy14) v2cgybwgoB175
Bhi10G001468Cucumber (Gy14) v2cgybwgoB652
Bhi10G001468Cucurbita maxima (Rimu)cmawgoB0131
Bhi10G001468Cucurbita maxima (Rimu)cmawgoB0667
Bhi10G001468Cucurbita maxima (Rimu)cmawgoB0684
Bhi10G001468Cucurbita moschata (Rifu)cmowgoB0128
Bhi10G001468Cucurbita moschata (Rifu)cmowgoB0665
Bhi10G001468Cucurbita moschata (Rifu)cmowgoB0679
Bhi10G001468Cucurbita moschata (Rifu)cmowgoB0750
Bhi10G001468Cucurbita pepo (Zucchini)cpewgoB0340
Bhi10G001468Cucurbita pepo (Zucchini)cpewgoB0363
Bhi10G001468Cucurbita pepo (Zucchini)cpewgoB0866
Bhi10G001468Cucurbita pepo (Zucchini)cpewgoB0949
Bhi10G001468Wild cucumber (PI 183967)cpiwgoB181
Bhi10G001468Wild cucumber (PI 183967)cpiwgoB693
Bhi10G001468Cucumber (Chinese Long) v3cucwgoB187
Bhi10G001468Cucumber (Chinese Long) v3cucwgoB706
Bhi10G001468Cucumber (Chinese Long) v2cuwgoB182
Bhi10G001468Cucumber (Chinese Long) v2cuwgoB681
Bhi10G001468Bottle gourd (USVL1VR-Ls)lsiwgoB080
Bhi10G001468Bottle gourd (USVL1VR-Ls)lsiwgoB128
Bhi10G001468Melon (DHL92) v3.6.1medwgoB116
Bhi10G001468Melon (DHL92) v3.6.1medwgoB232
Bhi10G001468Melon (DHL92) v3.5.1mewgoB115
Bhi10G001468Melon (DHL92) v3.5.1mewgoB231
Bhi10G001468Watermelon (Charleston Gray)wcgwgoB286
Bhi10G001468Watermelon (Charleston Gray)wcgwgoB302
Bhi10G001468Watermelon (97103) v2wgowmbB356
Bhi10G001468Watermelon (97103) v2wgowmbB373
Bhi10G001468Watermelon (97103) v1wgowmB383
Bhi10G001468Watermelon (97103) v1wgowmB399
Bhi10G001468Silver-seed gourdcarwgoB0400
Bhi10G001468Silver-seed gourdcarwgoB0432
Bhi10G001468Silver-seed gourdcarwgoB0943
Bhi10G001468Silver-seed gourdcarwgoB1196