Bhi10G001436 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001436
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr10 : 45513483 .. 45514015 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTAAAGAGAGCAATGGAGAATGCAAACTGAAAGAAAGGGAGCACGATACAATTCAAAATATGATCGCCACTAGGTGGAAAGAGAGAAGATTAGACAAGATAGAGAAGACTATAAAAGTGCAGACTAAAGAGCTTGATCTTAAAGAGGAGTTTGGTGCAATGGAGAGCAAGTTGAAGGCTCTTTTTGAAGACATGTGTTATCACATGAATCAGAATTAGAATCCATCAAAACGTGTATAAGGAACATAGTAAAGAACTTGAGGAATGTTTATATACTGTTTACAGATTTTAGTATGATTGTACAGACGATTAAAGAGAGCAATGGAGAACTCGAACAAAAAGAGGAGCTTGAGACAATTCGAGATATGATTGACAAATGGAAAGAAAGACAATTACACAAGATGGAAAAGAGTATAAAATTGCAGACTGAAGAGCTTGATCTTAAAGAGGAGCATACAGTGGAGGAGGCTGTCAAGGGTATTTCTGTGTTTCTTCTGCAGAGGATGCTGCTGTCGGGGTTGCTCTGA

mRNA sequence

ATGGCAATTAAAGAGAGCAATGGAGAATGCAAACTGAAAGAAAGGGAGCACGATACAATTCAAAATATGATCGCCACTAGGTGGAAAGAGAGAAGATTAGACAAGATAGAGAAGACTATAAAAGTGCAGACTAAAGAGCTTGATCTTAAAGAGGAGTTTGGTGCAATGGAGAGCAAGTTGAAGGCTCTTTTTGAAGACATGTATTTTAGTATGATTGTACAGACGATTAAAGAGAGCAATGGAGAACTCGAACAAAAAGAGGAGCTTGAGACAATTCGAGATATGATTGACAAATGGAAAGAAAGACAATTACACAAGATGGAAAAGAGTATAAAATTGCAGACTGAAGAGCTTGATCTTAAAGAGGAGCATACAGTGGAGGAGGCTGTCAAGGGTATTTCTGTGTTTCTTCTGCAGAGGATGCTGCTGTCGGGGTTGCTCTGA

Coding sequence (CDS)

ATGGCAATTAAAGAGAGCAATGGAGAATGCAAACTGAAAGAAAGGGAGCACGATACAATTCAAAATATGATCGCCACTAGGTGGAAAGAGAGAAGATTAGACAAGATAGAGAAGACTATAAAAGTGCAGACTAAAGAGCTTGATCTTAAAGAGGAGTTTGGTGCAATGGAGAGCAAGTTGAAGGCTCTTTTTGAAGACATGTATTTTAGTATGATTGTACAGACGATTAAAGAGAGCAATGGAGAACTCGAACAAAAAGAGGAGCTTGAGACAATTCGAGATATGATTGACAAATGGAAAGAAAGACAATTACACAAGATGGAAAAGAGTATAAAATTGCAGACTGAAGAGCTTGATCTTAAAGAGGAGCATACAGTGGAGGAGGCTGTCAAGGGTATTTCTGTGTTTCTTCTGCAGAGGATGCTGCTGTCGGGGTTGCTCTGA

Protein sequence

MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKEEFGAMESKLKALFEDMYFSMIVQTIKESNGELEQKEELETIRDMIDKWKERQLHKMEKSIKLQTEELDLKEEHTVEEAVKGISVFLLQRMLLSGLL

Homology

[Close]

BLAST of Bhi10G001436 vs. NCBI nr
Match: XP_023532103.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111794365 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.3 bits (207), Expect = 3.7e-13
Identity = 43/68 (63.24%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1   MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKE-EFGAMESK 60
           MAIK++NG+ KLKE++ +TI NMI T+WK  RLDKIEK+IK++T+ELDLKE EFG +++K
Sbjct: 217 MAIKDTNGKLKLKEKDLETIHNMITTKWKMERLDKIEKSIKLRTQELDLKEKEFGLLQNK 276

Query: 61  LKALFEDM 68
           LK L ED+
Sbjct: 277 LKVLSEDL 284

[Close]

BLAST of Bhi10G001436 vs. NCBI nr
Match: XP_022947045.1 (uncharacterized protein LOC111451040 isoform X1 [Cucurbita moschata])

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 42/68 (61.76%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKE-EFGAMESK 60
           MAIK++NG+ KLKE++ +TI NMI T+WK  R DKIEK+IK++T+ELDLKE EFG +++K
Sbjct: 217 MAIKDTNGKLKLKEKDLETILNMITTKWKMERFDKIEKSIKLRTQELDLKEKEFGLLQNK 276

Query: 61  LKALFEDM 68
           LK L ED+
Sbjct: 277 LKVLSEDV 284

[Close]

BLAST of Bhi10G001436 vs. NCBI nr
Match: XP_022947046.1 (uncharacterized protein LOC111451040 isoform X2 [Cucurbita moschata])

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 42/68 (61.76%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKE-EFGAMESK 60
           MAIK++NG+ KLKE++ +TI NMI T+WK  R DKIEK+IK++T+ELDLKE EFG +++K
Sbjct: 217 MAIKDTNGKLKLKEKDLETILNMITTKWKMERFDKIEKSIKLRTQELDLKEKEFGLLQNK 276

Query: 61  LKALFEDM 68
           LK L ED+
Sbjct: 277 LKVLSEDV 284

[Close]

BLAST of Bhi10G001436 vs. NCBI nr
Match: XP_023006928.1 (uncharacterized protein LOC111499572 isoform X2 [Cucurbita maxima])

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 41/68 (60.29%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1   MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKE-EFGAMESK 60
           MAIK++NG+ KLKE++ +TI NMI T+WK  RLD+IE++IK++T+ELDLKE EFG +++K
Sbjct: 217 MAIKDTNGKLKLKEKDLETIHNMITTKWKMERLDEIERSIKLRTQELDLKEKEFGLLQNK 276

Query: 61  LKALFEDM 68
           LK L ED+
Sbjct: 277 LKVLSEDL 284

[Close]

BLAST of Bhi10G001436 vs. NCBI nr
Match: XP_023006927.1 (uncharacterized protein LOC111499572 isoform X1 [Cucurbita maxima])

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 41/68 (60.29%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1   MAIKESNGECKLKEREHDTIQNMIATRWKERRLDKIEKTIKVQTKELDLKE-EFGAMESK 60
           MAIK++NG+ KLKE++ +TI NMI T+WK  RLD+IE++IK++T+ELDLKE EFG +++K
Sbjct: 217 MAIKDTNGKLKLKEKDLETIHNMITTKWKMERLDEIERSIKLRTQELDLKEKEFGLLQNK 276

Query: 61  LKALFEDM 68
           LK L ED+
Sbjct: 277 LKVLSEDL 284

The following BLAST results are available for this feature:

BLAST of Bhi10G001436 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10G001436 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G001436 vs. TrEMBL


Match Name	E-value	Identity	Description

BLAST of Bhi10G001436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532103.1	3.7e-13	63.24	LOW QUALITY PROTEIN: uncharacterized protein LOC111794365 [Cucurbita pepo subsp....	[more]
XP_022947045.1	2.4e-12	61.76	uncharacterized protein LOC111451040 isoform X1 [Cucurbita moschata]	[more]
XP_022947046.1	2.4e-12	61.76	uncharacterized protein LOC111451040 isoform X2 [Cucurbita moschata]	[more]
XP_023006928.1	2.4e-12	60.29	uncharacterized protein LOC111499572 isoform X2 [Cucurbita maxima]	[more]
XP_023006927.1	2.4e-12	60.29	uncharacterized protein LOC111499572 isoform X1 [Cucurbita maxima]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001436	Bhi10M001436	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G001436	Csa2G277090	Cucumber (Chinese Long) v2	cuwgoB182
Bhi10G001436	CSPI02G13920	Wild cucumber (PI 183967)	cpiwgoB181

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001436	Wax gourd	wgowgoB068
Bhi10G001436	Cucumber (Gy14) v1	cgywgoB464
Bhi10G001436	Cucumber (Gy14) v1	cgywgoB745
Bhi10G001436	Cucumber (Gy14) v2	cgybwgoB171
Bhi10G001436	Cucumber (Gy14) v2	cgybwgoB175
Bhi10G001436	Cucumber (Gy14) v2	cgybwgoB652
Bhi10G001436	Cucurbita maxima (Rimu)	cmawgoB0131
Bhi10G001436	Cucurbita maxima (Rimu)	cmawgoB0667
Bhi10G001436	Cucurbita maxima (Rimu)	cmawgoB0684
Bhi10G001436	Cucurbita maxima (Rimu)	cmawgoB0753
Bhi10G001436	Cucurbita maxima (Rimu)	cmawgoB0760
Bhi10G001436	Cucurbita moschata (Rifu)	cmowgoB0128
Bhi10G001436	Cucurbita moschata (Rifu)	cmowgoB0665
Bhi10G001436	Cucurbita moschata (Rifu)	cmowgoB0679
Bhi10G001436	Cucurbita moschata (Rifu)	cmowgoB0743
Bhi10G001436	Cucurbita moschata (Rifu)	cmowgoB0750
Bhi10G001436	Cucurbita pepo (Zucchini)	cpewgoB0340
Bhi10G001436	Cucurbita pepo (Zucchini)	cpewgoB0363
Bhi10G001436	Cucurbita pepo (Zucchini)	cpewgoB0866
Bhi10G001436	Cucurbita pepo (Zucchini)	cpewgoB0949
Bhi10G001436	Cucurbita pepo (Zucchini)	cpewgoB0965
Bhi10G001436	Wild cucumber (PI 183967)	cpiwgoB174
Bhi10G001436	Wild cucumber (PI 183967)	cpiwgoB693
Bhi10G001436	Cucumber (Chinese Long) v3	cucwgoB183
Bhi10G001436	Cucumber (Chinese Long) v3	cucwgoB187
Bhi10G001436	Cucumber (Chinese Long) v3	cucwgoB706
Bhi10G001436	Cucumber (Chinese Long) v2	cuwgoB178
Bhi10G001436	Cucumber (Chinese Long) v2	cuwgoB681
Bhi10G001436	Bottle gourd (USVL1VR-Ls)	lsiwgoB075
Bhi10G001436	Bottle gourd (USVL1VR-Ls)	lsiwgoB080
Bhi10G001436	Bottle gourd (USVL1VR-Ls)	lsiwgoB128
Bhi10G001436	Melon (DHL92) v3.6.1	medwgoB116
Bhi10G001436	Melon (DHL92) v3.6.1	medwgoB136
Bhi10G001436	Melon (DHL92) v3.6.1	medwgoB232
Bhi10G001436	Melon (DHL92) v3.5.1	mewgoB115
Bhi10G001436	Melon (DHL92) v3.5.1	mewgoB135
Bhi10G001436	Watermelon (97103) v1	wgowmB387
Bhi10G001436	Melon (DHL92) v3.5.1	mewgoB231
Bhi10G001436	Watermelon (Charleston Gray)	wcgwgoB286
Bhi10G001436	Watermelon (Charleston Gray)	wcgwgoB291
Bhi10G001436	Watermelon (Charleston Gray)	wcgwgoB302
Bhi10G001436	Watermelon (97103) v2	wgowmbB356
Bhi10G001436	Watermelon (97103) v2	wgowmbB363
Bhi10G001436	Watermelon (97103) v2	wgowmbB373
Bhi10G001436	Watermelon (97103) v1	wgowmB383
Bhi10G001436	Watermelon (97103) v1	wgowmB399
Bhi10G001436	Silver-seed gourd	carwgoB0432
Bhi10G001436	Silver-seed gourd	carwgoB0943
Bhi10G001436	Silver-seed gourd	carwgoB1196