Bhi10G001370 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001370
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Photosystem II D2 protein
Location	chr10 : 43424138 .. 43425103 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATAGCCGTTGGTAAATTTACCAAAGAGGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTCGGAGGTTGGTTTACAAGTACAACCTTTGTAACTTCATGGTATACCTATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCCCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTATTGCTCTCCACGGTGCTTTGGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTTGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCGGGCCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGATTGGTTCTTTGTGCCTAGTTTTGGTGTAGCAACTATATTTCGATTCATCCCCTTTTTCAAAAGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCGGGTGTATTGGGCGCTGTTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCTTTTTCTCAGGAAATCCGTGCAGCGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATCTCTTAA

mRNA sequence

ATGACTATAGCCGTTGGTAAATTTACCAAAGAGGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTCGGAGGTTGGTTTACAAGTACAACCTTTGTAACTTCATGGTATACCTATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCCCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTATTGCTCTCCACGGTGCTTTGGGACTAATAGGTCAGTCTGATTGGTTCTTTGTGCCTAGTTTTGGTGTAGCAACTATATTTCGATTCATCCCCTTTTTCAAAAGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCGGGTGTATTGGGCGCTGTTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCTTTTTCTCAGGAAATCCGTGCAGCGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATCTCTTAA

Coding sequence (CDS)

ATGACTATAGCCGTTGGTAAATTTACCAAAGAGGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTCGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTCGGAGGTTGGTTTACAAGTACAACCTTTGTAACTTCATGGTATACCTATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCCCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTATTGCTCTCCACGGTGCTTTGGGACTAATAGGTCAGTCTGATTGGTTCTTTGTGCCTAGTTTTGGTGTAGCAACTATATTTCGATTCATCCCCTTTTTCAAAAGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCGGGTGTATTGGGCGCTGTTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCTTTTTCTCAGGAAATCCGTGCAGCGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATCTCTTAA

Protein sequence

MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWYTYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGALGLIGQSDWFFVPSFGVATIFRFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFFFSGNPCSEDPEFETFYTKNIS

Homology

[Close]

BLAST of Bhi10G001370 vs. TAIR10
Match: ATCG00270.1 (photosystem II reaction center protein D)

HSP 1 Score: 516.9 bits (1330), Expect = 7.7e-147
Identity = 255/320 (79.69%), Postives = 262/320 (81.88%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTK+E DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFA+GGWFT TTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW F+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
             LI                                       GQS WFF PSFGVA IF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. TAIR10
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 75/298 (25.17%), Postives = 130/298 (43.62%), Query Frame = 0


Query: 10  KEENDLFDIMDDWL-RRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWYTYGL---- 69
           +E   L+    +W+   +  +++GW G+L+ P    A   +  +          G+    
Sbjct: 8   RESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67

Query: 70  ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGALGL- 129
           + S L G N ++ A+   + ++      +W          W   GG +  I LH  LG+ 
Sbjct: 68  SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 127

Query: 130 ------------IGQSDWFFVP--------------------------SFGVATIFRFIP 189
                       +G   W  V                             G++  F F+ 
Sbjct: 128 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 187

Query: 190 FFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 249
            F+  HN  ++PFHM+GVAGV G  L  A+HG+ V ++L  E  +  +    +   Q EE
Sbjct: 188 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 247

Query: 250 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDF 261
           TY++V A+ ++ ++     +F+N R LHFF+   PV+G+W +ALG+  +A NL  ++F
Sbjct: 248 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

[Close]

BLAST of Bhi10G001370 vs. Swiss-Prot
Match: sp|Q4VZN8|PSBD_CUCSA (Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 3.0e-148
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIAVGKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. Swiss-Prot
Match: sp|Q2MIJ2|PSBD_SOLBU (Photosystem II D2 protein OS=Solanum bulbocastanum OX=147425 GN=psbD PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 3.9e-148
Identity = 259/320 (80.94%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. Swiss-Prot
Match: sp|Q2MIA5|PSBD_SOLLC (Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 3.9e-148
Identity = 259/320 (80.94%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. Swiss-Prot
Match: sp|Q2VEI1|PSBD_SOLTU (Photosystem II D2 protein OS=Solanum tuberosum OX=4113 GN=psbD PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 3.9e-148
Identity = 259/320 (80.94%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. Swiss-Prot
Match: sp|P69685|PSBD_ANTMA (Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 6.7e-148
Identity = 259/320 (80.94%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. TrEMBL
Match: tr|A0A2J6LNG4|A0A2J6LNG4_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X1941 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 9.3e-147
Identity = 253/281 (90.04%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GK TK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIALGKVTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGLEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLIGQSDWFFVPSFGVATIFRFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATV 180
            GLIGQS WFF P+FGVA IFRFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATV
Sbjct: 121 FGLIGQSGWFFAPNFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATV 180

Query: 181 ENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIG 240
           ENTLFEDGDG NTF AFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV G
Sbjct: 181 ENTLFEDGDGENTFHAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTG 240

Query: 241 LWMSALGVVGLALNLRAYDFFFSGNPCSEDPEFETFYTKNI 282
           LWMSALGVVGLALNLRAYDF       +ED EFETFYTKNI
Sbjct: 241 LWMSALGVVGLALNLRAYDFVSQEIRAAEDLEFETFYTKNI 281

[Close]

BLAST of Bhi10G001370 vs. TrEMBL
Match: tr|M9TLG4|M9TLG4_SOLCA (Photosystem II D2 protein OS=Solanum carolinense OX=50511 GN=psbD PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. TrEMBL
Match: tr|A0A168RC36|A0A168RC36_SOLME (Photosystem II D2 protein OS=Solanum melongena OX=4111 GN=psbD PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. TrEMBL
Match: tr|A0A1W6S4A8|A0A1W6S4A8_SOLEL (Photosystem II D2 protein OS=Solanum elaeagnifolium OX=115664 GN=psbD PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. TrEMBL
Match: tr|A0A0K1ZAD5|A0A0K1ZAD5_SOLRO (Photosystem II D2 protein OS=Solanum rostratum OX=45839 GN=psbD PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. NCBI nr
Match: PLY88871.1 (hypothetical protein LSAT_8X1941 [Lactuca sativa])

HSP 1 Score: 528.5 bits (1360), Expect = 1.4e-146
Identity = 253/281 (90.04%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GK TK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIALGKVTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGLEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLIGQSDWFFVPSFGVATIFRFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATV 180
            GLIGQS WFF P+FGVA IFRFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATV
Sbjct: 121 FGLIGQSGWFFAPNFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATV 180

Query: 181 ENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIG 240
           ENTLFEDGDG NTF AFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV G
Sbjct: 181 ENTLFEDGDGENTFHAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTG 240

Query: 241 LWMSALGVVGLALNLRAYDFFFSGNPCSEDPEFETFYTKNI 282
           LWMSALGVVGLALNLRAYDF       +ED EFETFYTKNI
Sbjct: 241 LWMSALGVVGLALNLRAYDFVSQEIRAAEDLEFETFYTKNI 281

[Close]

BLAST of Bhi10G001370 vs. NCBI nr
Match: YP_009254073.1 (PsbD (plastid) [Solanum melongena] >AGJ51251.1 photosystem II protein D2 (chloroplast) [Solanum carolinense] >AKZ22942.1 photosystem II protein D2 (plastid) [Solanum carolinense] >AKZ22943.1 photosystem II protein D2 (plastid) [Solanum rostratum] >AMX23153.1 photosystem II protein D (chloroplast) [Solanum melongena] >ANC62758.1 PsbD (plastid) [Solanum melongena] >ARO73730.1 photosystem II protein D2 (chloroplast) [Nassella trichotoma] >ARO73784.1 photosystem II protein D2 (chloroplast) [Solanum elaeagnifolium] >AUJ22435.1 photosystem II protein D2 (chloroplast) [Solanum melongena] >AXQ37418.1 photosystem II protein D2 (chloroplast) [Solanum aureitomentosum] >AXQ37501.1 photosystem II protein D2 (chloroplast) [Solanum lichtensteinii] >AXQ37584.1 photosystem II protein D2 (chloroplast) [Solanum cerasiferum] >AXQ37667.1 photosystem II protein D2 (chloroplast) [Solanum linnaeanum] >AXQ37750.1 photosystem II protein D2 (chloroplast) [Solanum supinum] >AXQ37833.1 photosystem II protein D2 (chloroplast) [Solanum rigidum] >AXQ37916.1 photosystem II protein D2 (chloroplast) [Solanum trilobatum] >AXQ37999.1 photosystem II protein D2 (chloroplast) [Solanum melongena] >AXQ38082.1 photosystem II protein D2 (chloroplast) [Solanum glabratum] >AXQ38165.1 photosystem II protein D2 (chloroplast) [Solanum umtuma] >AXQ38248.1 photosystem II protein D2 (chloroplast) [Solanum melongena var. insanum] >AXQ38331.1 photosystem II protein D2 (chloroplast) [Solanum violaceum] >AXQ38414.1 photosystem II protein D2 (chloroplast) [Solanum incanum] >AXQ38497.1 photosystem II protein D2 (chloroplast) [Solanum macrocarpon] >AXQ38580.1 photosystem II protein D2 (chloroplast) [Solanum polhillii] >AXQ38663.1 photosystem II protein D2 (chloroplast) [Solanum dasyphyllum] >AXQ38746.1 photosystem II protein D2 (chloroplast) [Solanum aethiopicum] >AXQ38829.1 photosystem II protein D2 (chloroplast) [Solanum campylacanthum] >AXQ38912.1 photosystem II protein D2 (chloroplast) [Solanum usambarense] >AXQ38995.1 photosystem II protein D2 (chloroplast) [Solanum agnewiorum] >AXQ39078.1 photosystem II protein D2 (chloroplast) [Solanum incanum] >AXQ39161.1 photosystem II protein D2 (chloroplast) [Solanum richardii] >AXQ39243.1 photosystem II protein D2 (chloroplast) [Solanum lanzae] >AXQ39326.1 photosystem II protein D2 (chloroplast) [Solanum anguivi])

HSP 1 Score: 526.6 bits (1355), Expect = 5.4e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAIGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. NCBI nr
Match: ABU85616.1 (photosystem II protein D2, partial (chloroplast) [Scaevola aemula] >AFU94448.1 PsbD, partial (chloroplast) [Triadenum fraseri] >AKZ30062.1 photosystem II protein D2 (chloroplast) [Selliera radicans] >AKZ30126.1 photosystem II protein D2 (chloroplast) [Velleia rosea] >AKZ30253.1 photosystem II protein D2 (chloroplast) [Goodenia ovata] >AKZ30451.1 photosystem II protein D2 (chloroplast) [Goodenia viscida] >AKZ30518.1 photosystem II protein D2 (chloroplast) [Velleia discophora] >AKZ30650.1 photosystem II protein D2 (chloroplast) [Velleia foliosa] >AKZ30716.1 photosystem II protein D2 (chloroplast) [Scaevola tomentosa] >AKZ30785.1 photosystem II protein D2 (chloroplast) [Goodenia tripartita] >AKZ30850.1 photosystem II protein D2 (chloroplast) [Diaspasis filifolia] >AKZ30977.1 photosystem II protein D2 (chloroplast) [Scaevola phlebopetala] >AKZ31111.1 photosystem II protein D2 (chloroplast) [Scaevola collaris] >AKZ31236.1 photosystem II protein D2 (chloroplast) [Scaevola porocarya] >AKZ31306.1 photosystem II protein D2 (chloroplast) [Coopernookia polygalacea] >AKZ31372.1 photosystem II protein D2 (chloroplast) [Coopernookia strophiolata] >AKZ31502.1 photosystem II protein D2 (chloroplast) [Goodenia phillipsiae])

HSP 1 Score: 525.8 bits (1353), Expect = 9.1e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIA+GKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIALGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. NCBI nr
Match: YP_247594.1 (photosystem II protein D2 [Cucumis sativus] >YP_004841778.1 photosystem II protein D2 [Cucumis melo subsp. melo] >YP_009004039.1 photosystem II protein D2 [Cucumis hystrix] >YP_009317381.1 photosystem II protein D2 (chloroplast) [Coccinia grandis] >YP_009325984.1 photosystem II protein D2 (chloroplast) [Citrullus lanatus] >YP_009346480.1 photosystem II protein D2 (chloroplast) [Cucumis x hytivus] >YP_009348026.1 photosystem II protein D2 (plastid) [Citrullus mucosospermus] >YP_009420789.1 photosystem II protein D2 (chloroplast) [Citrullus colocynthis] >YP_009431552.1 photosystem II protein D2 (chloroplast) [Citrullus amarus] >YP_009431637.1 photosystem II protein D2 (chloroplast) [Citrullus rehmii] >YP_009456056.1 photosystem II protein D2 (chloroplast) [Momordica charantia] >YP_009456141.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >Q4VZN8.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein >CAJ00753.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >AAZ94646.1 PSII D2 protein (chloroplast) [Cucumis sativus] >ABI97412.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >ABI98741.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >AEM76887.1 photosystem II protein D2 (chloroplast) [Cucumis melo subsp. melo] >AHJ61381.1 photosystem II protein D2 (plastid) [Cucumis hystrix] >AHM88698.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM88757.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM88815.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM88872.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM88930.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM88988.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89047.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89106.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89165.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89224.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89283.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89343.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89402.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89461.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89520.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89580.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89639.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89698.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89757.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89816.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89875.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89934.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM89993.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90052.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90111.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90170.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90229.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90288.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90347.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90406.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90465.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90524.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90583.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90642.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90701.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90760.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90819.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90878.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90937.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM90996.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM91055.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM91113.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM91173.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM91231.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AHM91288.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >ALF03296.1 photosystem II protein D2 (chloroplast) [Cucumis sativus var. hardwickii] >ALO21958.1 PsbD (plastid) [Cucurbita cordata] >ALO21964.1 PsbD (plastid) [Cucurbita digitata] >ALO22105.1 PsbD (plastid) [Cucurbita ficifolia] >ALO22173.1 PsbD (plastid) [Cucurbita foetidissima] >ALO22881.1 PsbD (plastid) [Cucurbita pedatifolia] >ANF28372.1 photosystem II protein D2 (chloroplast) [Cucumis sativus var. hardwickii] >AOW71090.1 photosystem II protein D2 (chloroplast) [Cucumis x hytivus] >AOX48743.1 photosystem II protein D2 (chloroplast) [Coccinia grandis] >AOX48828.1 photosystem II protein D2 (chloroplast) [Coccinia grandis] >APD52475.1 photosystem II protein D2 (chloroplast) [Citrullus lanatus] >APW82456.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82541.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82626.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82711.1 photosystem II protein D2 (plastid) [Citrullus mucosospermus] >APW82796.1 photosystem II protein D2 (plastid) [Citrullus mucosospermus] >APW82881.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW82966.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83051.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83136.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83221.1 photosystem II protein D2 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83306.1 photosystem II protein D2 (plastid) [Citrullus mucosospermus] >ARQ16073.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >ARQ16156.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >ARQ16239.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >ARQ16322.1 photosystem II protein D2 (chloroplast) [Cucumis sativus] >ASP44495.1 photosystem II protein D2 (chloroplast) [Citrullus colocynthis] >ASY96193.1 photosystem II protein D2 (chloroplast) [Citrullus amarus] >ASY96281.1 photosystem II protein D2 (chloroplast) [Citrullus rehmii] >ASY96364.1 photosystem II protein D2 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96451.1 photosystem II protein D2 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96538.1 photosystem II protein D2 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96624.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. conomon] >ASY96712.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. makuwa] >ASY96799.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. momordica] >ASY96886.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. dudaim] >ASY96973.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. cantalupo] >ASY97060.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. cantalupo] >ASY97147.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. inodorus] >ASY97234.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. cantalupo] >ASY97321.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. flexuosus] >ASY97408.1 photosystem II protein D2 (chloroplast) [Cucumis melo var. flexuosus] >ASY97496.1 photosystem II protein D2 (chloroplast) [Cucumis sativus var. hardwickii] >AUJ21823.1 photosystem II protein D2 (chloroplast) [Momordica charantia] >AUJ21907.1 photosystem II protein D2 (chloroplast) [Lagenaria siceraria] >AVE15326.1 PsbD (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 9.1e-146
Identity = 260/320 (81.25%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIAVGKFTK+ENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

[Close]

BLAST of Bhi10G001370 vs. NCBI nr
Match: YP_009447530.1 (photosystem II protein D2 (chloroplast) [Cucurbita moschata] >YP_009505075.1 photosystem II protein D2 (chloroplast) [Cucurbita pepo] >ALO21745.1 PsbD (plastid) [Cucurbita argyrosperma] >ALO21771.1 PsbD (plastid) [Cucurbita argyrosperma var. palmeri] >ALO21860.1 PsbD (plastid) [Cucurbita argyrosperma subsp. sororia] >ALO22068.1 PsbD (plastid) [Cucurbita ecuadorensis] >ALO22271.1 PsbD (plastid) [Cucurbita lundelliana] >ALO22402.1 PsbD (plastid) [Cucurbita moschata] >ALO22411.1 PsbD (plastid) [Cucurbita okeechobeensis] >ALO22525.1 PsbD (plastid) [Cucurbita okeechobeensis subsp. martinezii] >ALO22558.1 PsbD (plastid) [Cucurbita pepo subsp. fraterna] >ALO22652.1 PsbD (plastid) [Cucurbita pepo subsp. ovifera] >ALO22682.1 PsbD (plastid) [Cucurbita pepo var. ozarkana] >ALO22789.1 PsbD (plastid) [Cucurbita pepo subsp. pepo] >ALO22833.1 PsbD (plastid) [Cucurbita pepo var. texana] >ATY69985.1 photosystem II protein D2 (chloroplast) [Cucurbita moschata] >AWX90379.1 photosystem II protein D2 (chloroplast) [Cucurbita pepo])

HSP 1 Score: 525.4 bits (1352), Expect = 1.2e-145
Identity = 259/320 (80.94%), Postives = 265/320 (82.81%), Query Frame = 0


Query: 1   MTIAVGKFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTSTTFVTSWY 60
           MTIAVGKFTK+ENDLFD+MDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFT TTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDVMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  TYGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGA 120
           T+GLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF+ALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 LGLI---------------------------------------GQSDWFFVPSFGVATIF 180
            GLI                                       GQS WFF PSFGVA IF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFIPFFKRFHNWTLNPFHMMGVAGVLGAVLLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFI FF+ FHNWTLNPFHMMGVAGVLGA LLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVIGLWMSALGVVGLALNLRAYDFF 282
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPV GLWMSALGVVGLALNLRAYDF 
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

The following BLAST results are available for this feature:

BLAST of Bhi10G001370 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00270.1	7.7e-147	79.69	photosystem II reaction center protein D	[more]
ATCG00020.1	2.2e-21	25.17	photosystem II reaction center protein A	[more]

BLAST of Bhi10G001370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4VZN8\|PSBD_CUCSA	3.0e-148	81.25	Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1	[more]
sp\|Q2MIJ2\|PSBD_SOLBU	3.9e-148	80.94	Photosystem II D2 protein OS=Solanum bulbocastanum OX=147425 GN=psbD PE=3 SV=1	[more]
sp\|Q2MIA5\|PSBD_SOLLC	3.9e-148	80.94	Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1	[more]
sp\|Q2VEI1\|PSBD_SOLTU	3.9e-148	80.94	Photosystem II D2 protein OS=Solanum tuberosum OX=4113 GN=psbD PE=3 SV=1	[more]
sp\|P69685\|PSBD_ANTMA	6.7e-148	80.94	Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1	[more]

BLAST of Bhi10G001370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2J6LNG4\|A0A2J6LNG4_LACSA	9.3e-147	90.04	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X1941 PE=4 SV=1	[more]
tr\|M9TLG4\|M9TLG4_SOLCA	3.5e-146	81.25	Photosystem II D2 protein OS=Solanum carolinense OX=50511 GN=psbD PE=3 SV=1	[more]
tr\|A0A168RC36\|A0A168RC36_SOLME	3.5e-146	81.25	Photosystem II D2 protein OS=Solanum melongena OX=4111 GN=psbD PE=3 SV=1	[more]
tr\|A0A1W6S4A8\|A0A1W6S4A8_SOLEL	3.5e-146	81.25	Photosystem II D2 protein OS=Solanum elaeagnifolium OX=115664 GN=psbD PE=3 SV=1	[more]
tr\|A0A0K1ZAD5\|A0A0K1ZAD5_SOLRO	3.5e-146	81.25	Photosystem II D2 protein OS=Solanum rostratum OX=45839 GN=psbD PE=3 SV=1	[more]

BLAST of Bhi10G001370 vs. NCBI nr


Match Name	E-value	Identity	Description
PLY88871.1	1.4e-146	90.04	hypothetical protein LSAT_8X1941 [Lactuca sativa]	[more]
YP_009254073.1	5.4e-146	81.25	PsbD (plastid) [Solanum melongena] >AGJ51251.1 photosystem II protein D2 (chloro...	[more]
ABU85616.1	9.1e-146	81.25	photosystem II protein D2, partial (chloroplast) [Scaevola aemula] >AFU94448.1 P...	[more]
YP_247594.1	9.1e-146	81.25	photosystem II protein D2 [Cucumis sativus] >YP_004841778.1 photosystem II prote...	[more]
YP_009447530.1	1.2e-145	80.94	photosystem II protein D2 (chloroplast) [Cucurbita moschata] >YP_009505075.1 pho...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Vocabulary: **Biological Process**
Term	Definition
GO:0019684	photosynthesis, light reaction
GO:0009772	photosynthetic electron transport in photosystem II

Vocabulary: **INTERPRO**
Term	Definition
IPR000484	Photo_RC_L/M
IPR036854	Photo_II_D1/D2_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001370	Bhi10M001370	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	G3DSA:1.20.85.10		coord: 105..258 e-value: 7.5E-13 score: 50.5
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	SSF81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 16..281
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 124..276 e-value: 5.1E-33 score: 114.3 coord: 29..124 e-value: 9.8E-14 score: 51.1
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..125 coord: 125..281
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 152..178
None	No IPR available	PANTHER	PTHR33149:SF8	PHOTOSYSTEM II D2 PROTEIN	coord: 1..125 coord: 125..281

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001370	Cucumber (Gy14) v1	cgywgoB456
Bhi10G001370	Cucumber (Gy14) v2	cgybwgoB170
Bhi10G001370	Cucurbita maxima (Rimu)	cmawgoB0698
Bhi10G001370	Cucurbita maxima (Rimu)	cmawgoB0748
Bhi10G001370	Cucurbita moschata (Rifu)	cmowgoB0692
Bhi10G001370	Cucurbita moschata (Rifu)	cmowgoB0739
Bhi10G001370	Cucurbita pepo (Zucchini)	cpewgoB0359
Bhi10G001370	Cucurbita pepo (Zucchini)	cpewgoB0960
Bhi10G001370	Wild cucumber (PI 183967)	cpiwgoB173
Bhi10G001370	Cucumber (Chinese Long) v3	cucwgoB182
Bhi10G001370	Cucumber (Chinese Long) v2	cuwgoB176
Bhi10G001370	Bottle gourd (USVL1VR-Ls)	lsiwgoB071
Bhi10G001370	Melon (DHL92) v3.6.1	medwgoB134
Bhi10G001370	Melon (DHL92) v3.5.1	mewgoB131
Bhi10G001370	Watermelon (Charleston Gray)	wcgwgoB303
Bhi10G001370	Watermelon (97103) v2	wgowmbB372
Bhi10G001370	Watermelon (97103) v1	wgowmB379
Bhi10G001370	Silver-seed gourd	carwgoB0846
Bhi10G001370	Silver-seed gourd	carwgoB1241