Bhi10G000682 (gene) Wax gourd

NameBhi10G000682
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 17777178 .. 17777414 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGAGCTTGAGCAAGAGCAACGATTCCAATGATGATGTTTTTTTTATGCCACCACTACCACCACCACGAAAAAATGAAAGTGAGGAGACAGTTTCAAAGCATGCAAATGGAAGAAAGAGGAAAAATTCATCTATGGTATGGGATCACTTTACTAAATGTTCTAAATATAGTGATGATGATCCACATGCTAAATGTAACTATTGTGGGTATGGTATACGTATGTCATCCTAG

mRNA sequence

ATGAGTTTGAGCTTGAGCAAGAGCAACGATTCCAATGATGATGTTTTTTTTATGCCACCACTACCACCACCACGAAAAAATGAAAGTGAGGAGACAGTTTCAAAGCATGCAAATGGAAGAAAGAGGAAAAATTCATCTATGGTATGGGATCACTTTACTAAATGTTCTAAATATAGTGATGATGATCCACATGCTAAATGTAACTATTGTGGGTATGGTATACGTATGTCATCCTAG

Coding sequence (CDS)

ATGAGTTTGAGCTTGAGCAAGAGCAACGATTCCAATGATGATGTTTTTTTTATGCCACCACTACCACCACCACGAAAAAATGAAAGTGAGGAGACAGTTTCAAAGCATGCAAATGGAAGAAAGAGGAAAAATTCATCTATGGTATGGGATCACTTTACTAAATGTTCTAAATATAGTGATGATGATCCACATGCTAAATGTAACTATTGTGGGTATGGTATACGTATGTCATCCTAG

Protein sequence

MSLSLSKSNDSNDDVFFMPPLPPPRKNESEETVSKHANGRKRKNSSMVWDHFTKCSKYSDDDPHAKCNYCGYGIRMSS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR003656Znf_BED
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000682Bhi10M000682mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003656Zinc finger, BED-typePFAMPF02892zf-BEDcoord: 46..71
e-value: 2.5E-4
score: 20.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45