Bhi10G000658 (gene) Wax gourd

NameBhi10G000658
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionLOB domain-containing protein
Locationchr10 : 17099244 .. 17099522 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATATGAAGCGAGTGCAAGAATGAGGGATCCAGTATACGGTTGTGTAGGGACAATCTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATACAACTAGGGGCAGCACAAGCGGAGATTTTGACCTTACAGATGCAGCAACAGCAGGCTCCGATGACGACGACCACCCAAATGGATCAAGATGATCAAAATCTTGTTATTTTCTCAAATGTTGATTCTTCTAATTCCTTCCATACTTTCCAGGAAATGGAGGATTATTACCCTCTATGGACTTGA

mRNA sequence

ATGGTATATGAAGCGAGTGCAAGAATGAGGGATCCAGTATACGGTTGTGTAGGGACAATCTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATACAACTAGGGGCAGCACAAGCGGAGATTTTGACCTTACAGATGCAGCAACAGCAGGCTCCGATGACGACGACCACCCAAATGGATCAAGATGATCAAAATCTTGTTATTTTCTCAAATGTTGATTCTTCTAATTCCTTCCATACTTTCCAGGAAATGGAGGATTATTACCCTCTATGGACTTGA

Coding sequence (CDS)

ATGGTATATGAAGCGAGTGCAAGAATGAGGGATCCAGTATACGGTTGTGTAGGGACAATCTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATACAACTAGGGGCAGCACAAGCGGAGATTTTGACCTTACAGATGCAGCAACAGCAGGCTCCGATGACGACGACCACCCAAATGGATCAAGATGATCAAAATCTTGTTATTTTCTCAAATGTTGATTCTTCTAATTCCTTCCATACTTTCCAGGAAATGGAGGATTATTACCCTCTATGGACTTGA

Protein sequence

MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILTLQMQQQQAPMTTTTQMDQDDQNLVIFSNVDSSNSFHTFQEMEDYYPLWT
BLAST of Bhi10G000658 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-12
Identity = 30/42 (71.43%), Postives = 39/42 (92.86%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           +V+EA+AR+RDPVYGCVG IS+LQN+VS+L++QL  AQAEIL
Sbjct: 68  LVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

BLAST of Bhi10G000658 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-10
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           MVYEA+AR+RDPVYGCVG IS LQ ++  L+ QL  AQAE++
Sbjct: 73  MVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVV 114

BLAST of Bhi10G000658 vs. TAIR10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-09
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           MVYEA+AR++DPVYGCVGTIS L  ++  L+ QL  AQAE++
Sbjct: 75  MVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELI 116

BLAST of Bhi10G000658 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-09
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEI 42
           + YEA AR+RDPVYGCVG IS+LQ +V RL+ +L AA A++
Sbjct: 71  LAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

BLAST of Bhi10G000658 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-08
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEI 42
           + YEA  R+RDPVYGCVG IS LQ+++ +L+I L  A++E+
Sbjct: 69  LAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

BLAST of Bhi10G000658 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 5.6e-11
Identity = 30/42 (71.43%), Postives = 39/42 (92.86%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           +V+EA+AR+RDPVYGCVG IS+LQN+VS+L++QL  AQAEIL
Sbjct: 68  LVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

BLAST of Bhi10G000658 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           MVYEA+AR+RDPVYGCVG IS LQ ++  L+ QL  AQAE++
Sbjct: 73  MVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVV 114

BLAST of Bhi10G000658 vs. Swiss-Prot
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           MVYEA+AR++DPVYGCVGTIS L  ++  L+ QL  AQAE++
Sbjct: 75  MVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELI 116

BLAST of Bhi10G000658 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEI 42
           + YEA AR+RDPVYGCVG IS+LQ +V RL+ +L AA A++
Sbjct: 71  LAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

BLAST of Bhi10G000658 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.4e-07
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEI 42
           + YEA  R+RDPVYGCVG IS LQ+++ +L+I L  A++E+
Sbjct: 69  LAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

BLAST of Bhi10G000658 vs. TrEMBL
Match: tr|A0A1S3CKM4|A0A1S3CKM4_CUCME (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-23
Identity = 66/95 (69.47%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT---XXXXXXXXXXXXXX 60
           MVYEASARM+DPVYGCVGTI+FLQNEVSRLEIQLGAAQAEILT             XXXX
Sbjct: 67  MVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTTFPXXXX 126

Query: 61  XXXXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
                 QNL+IFSN DSSNS H FQ  EDYY +WT
Sbjct: 127 QMDQDEQNLMIFSNTDSSNSLHIFQATEDYYHMWT 161

BLAST of Bhi10G000658 vs. TrEMBL
Match: tr|A0A0A0KBK5|A0A0A0KBK5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.4e-21
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL----TXXXXXXXXXXXXX 60
           MVYEASARM+DPVYGCVG I FLQNEVS+LEIQLGAA+AEIL                  
Sbjct: 67  MVYEASARMQDPVYGCVGKILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASITFPMTT 126

Query: 61  XXXXXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
                  QNL+I SN DSSNSFH FQ  +D+YPLWT
Sbjct: 127 TQMDQDEQNLMILSNADSSNSFHVFQAADDHYPLWT 162

BLAST of Bhi10G000658 vs. TrEMBL
Match: tr|A0A2G5D2R7|A0A2G5D2R7_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03000227v1 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILTXXXXXXXXXXXXXXXXX 60
           +VYEA+AR+RDPVYGCVG IS+LQN+VS+L++QL  AQAEIL                  
Sbjct: 66  LVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPALPTHHHQQI 125

Query: 61  XXXQNLVIFSNVDS--------SNSFHTFQEMEDYYPLWT 93
              ++L++ SN+DS        ++S +  Q+      LWT
Sbjct: 126 DDERSLLLHSNLDSIPQQYFNFASSSNVIQDPLKRESLWT 165

BLAST of Bhi10G000658 vs. TrEMBL
Match: tr|A0A059DAN8|A0A059DAN8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03991 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10
Identity = 32/43 (74.42%), Postives = 41/43 (95.35%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT 44
           +VYEA+AR+RDPVYGCVGTIS+LQN+VS L++QL AAQAE+L+
Sbjct: 69  LVYEANARVRDPVYGCVGTISYLQNQVSELQLQLAAAQAEVLS 111

BLAST of Bhi10G000658 vs. TrEMBL
Match: tr|Q5W6R0|Q5W6R0_ORYSJ (Os05g0346800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0346800 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-10
Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL 43
           +VYEA+ARMRDPVYGCVG ISFLQN+VS+L++QL  AQAEIL
Sbjct: 66  LVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEIL 107

BLAST of Bhi10G000658 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 66/95 (69.47%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT---XXXXXXXXXXXXXX 60
           MVYEASARM+DPVYGCVGTI+FLQNEVSRLEIQLGAAQAEILT             XXXX
Sbjct: 67  MVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTTFPXXXX 126

Query: 61  XXXXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
                 QNL+IFSN DSSNS H FQ  EDYY +WT
Sbjct: 127 QMDQDEQNLMIFSNTDSSNSLHIFQATEDYYHMWT 161

BLAST of Bhi10G000658 vs. NCBI nr
Match: XP_004143222.1 (PREDICTED: LOB domain-containing protein 12 [Cucumis sativus] >KGN47050.1 hypothetical protein Csa_6G181550 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 6.7e-21
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEIL----TXXXXXXXXXXXXX 60
           MVYEASARM+DPVYGCVG I FLQNEVS+LEIQLGAA+AEIL                  
Sbjct: 67  MVYEASARMQDPVYGCVGKILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASITFPMTT 126

Query: 61  XXXXXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
                  QNL+I SN DSSNSFH FQ  +D+YPLWT
Sbjct: 127 TQMDQDEQNLMILSNADSSNSFHVFQAADDHYPLWT 162

BLAST of Bhi10G000658 vs. NCBI nr
Match: XP_022947802.1 (LOB domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 7.6e-17
Identity = 53/93 (56.99%), Postives = 59/93 (63.44%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT-XXXXXXXXXXXXXXXX 60
           MVYEASARMRDPVYGCVG I+FLQN+VSRLE+QL AAQAEIL+                 
Sbjct: 67  MVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPASFPMTQM 126

Query: 61  XXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
               QNLV  SN DS NS     E+EDY  LW+
Sbjct: 127 NQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of Bhi10G000658 vs. NCBI nr
Match: XP_023006803.1 (LOB domain-containing protein 12-like [Cucurbita maxima])

HSP 1 Score: 95.9 bits (237), Expect = 7.6e-17
Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT-XXXXXXXXXXXXXXXX 60
           MVYEASARMRDPVYGCVG I+FLQN+VSRLE+QL AAQAEIL+ XXXXXXXXXX      
Sbjct: 67  MVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFXXXXXXXXXXFPMTQM 126

Query: 61  XXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
               QNLV  SN DS NS     E+EDY  LW+
Sbjct: 127 NQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of Bhi10G000658 vs. NCBI nr
Match: XP_023533075.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 7.6e-17
Identity = 53/93 (56.99%), Postives = 59/93 (63.44%), Query Frame = 0

Query: 1   MVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILT-XXXXXXXXXXXXXXXX 60
           MVYEASARMRDPVYGCVG I+FLQN+VSRLE+QL AAQAEIL+                 
Sbjct: 67  MVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPASFPMTQM 126

Query: 61  XXXXQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 93
               QNLV  SN DS NS     E+EDY  LW+
Sbjct: 127 NQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G30130.13.1e-1271.43Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.16.4e-1064.29LOB domain-containing protein 4[more]
AT1G16530.12.4e-0961.90ASYMMETRIC LEAVES 2-like 9[more]
AT5G63090.22.4e-0960.98Lateral organ boundaries (LOB) domain family protein[more]
AT1G65620.13.5e-0853.66Lateral organ boundaries (LOB) domain family protein[more]
Match NameE-valueIdentityDescription
sp|Q8LBW3|LBD12_ARATH5.6e-1171.43LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
sp|Q9SHE9|LBD4_ARATH1.2e-0864.29LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
sp|Q9SA51|LBD3_ARATH4.4e-0861.90LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=... [more]
sp|Q9FML4|LOB_ARATH4.4e-0860.98Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
sp|O04479|AS2_ARATH6.4e-0753.66Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3CKM4|A0A1S3CKM4_CUCME2.1e-2369.47LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE... [more]
tr|A0A0A0KBK5|A0A0A0KBK5_CUCSA4.4e-2160.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=4 SV=1[more]
tr|A0A2G5D2R7|A0A2G5D2R7_AQUCA2.1e-1041.00Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03000227v1 PE=4... [more]
tr|A0A059DAN8|A0A059DAN8_EUCGR2.7e-1074.42Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03991 PE=4 SV... [more]
tr|Q5W6R0|Q5W6R0_ORYSJ6.0e-1078.57Os05g0346800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0346800 PE... [more]
Match NameE-valueIdentityDescription
XP_008463841.13.2e-2369.47PREDICTED: LOB domain-containing protein 12-like [Cucumis melo][more]
XP_004143222.16.7e-2160.42PREDICTED: LOB domain-containing protein 12 [Cucumis sativus] >KGN47050.1 hypoth... [more]
XP_022947802.17.6e-1756.99LOB domain-containing protein 12-like [Cucurbita moschata][more]
XP_023006803.17.6e-1767.74LOB domain-containing protein 12-like [Cucurbita maxima][more]
XP_023533075.17.6e-1756.99LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000658Bhi10M000658mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..47
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 1..71
NoneNo IPR availablePANTHERPTHR31301:SF61SUBFAMILY NOT NAMEDcoord: 1..71
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 1..38
e-value: 1.1E-8
score: 35.4
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 1..41
score: 9.249

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi10G000658CsGy5G008370Cucumber (Gy14) v2cgybwgoB469
Bhi10G000658CsGy6G013490Cucumber (Gy14) v2cgybwgoB578
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Bhi10G000658Bhi07G000470Wax gourdwgowgoB105