Bhi10G000492 (gene) Wax gourd

Overview
NameBhi10G000492
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionBeta-galactosidase
Locationchr10 : 13246020 .. 13246427 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAGAAGTTCTCACCAACGGCACGCTCCGTTCAGACCAAAAATTTGTAGCTTTTGTTACTTTAACAACGAAATTCTCCAACCCCACCAGTAGGGGAAGGTTTTGTTTTTTGAGCAACACGAATGCCGAGCAATATGCTAACATAGAGTTTGCAGCAGATGGAAAGGTACTTGTGACCCAAGCTTGGTCTGGAGCATTTCTTAACGTTGCAACACAAGAAGCTTTTCAACACTGCAAAGATGCAACGTTCCCAAACATCTATAGTTTGTTGAAGGTGCAGAAATGGACGAGGAAAAAATGCACACACGTCGGTGGGTTTTGGGCTCCGAGCCATGAGAGATACTCTTACAAGGAAAAGGTACATTTAACTGCTAAACCTCTTTTGGAACAAAAAGGAACGTAA

mRNA sequence

ATGGGAAGAGAAGTTCTCACCAACGGCACGCTCCGTTCAGACCAAAAATTTGTAGCTTTTGTTACTTTAACAACGAAATTCTCCAACCCCACCAGTAGGGGAAGGTTTTGTTTTTTGAGCAACACGAATGCCGAGCAATATGCTAACATAGAGTTTGCAGCAGATGGAAAGGTACTTGTGACCCAAGCTTGGTCTGGAGCATTTCTTAACGTTGCAACACAAGAAGCTTTTCAACACTGCAAAGATGCAACGTTCCCAAACATCTATAGTTTGTTGAAGGTGCAGAAATGGACGAGGAAAAAATGCACACACGTCGGTGGGTTTTGGGCTCCGAGCCATGAGAGATACTCTTACAAGGAAAAGGTACATTTAACTGCTAAACCTCTTTTGGAACAAAAAGGAACGTAA

Coding sequence (CDS)

ATGGGAAGAGAAGTTCTCACCAACGGCACGCTCCGTTCAGACCAAAAATTTGTAGCTTTTGTTACTTTAACAACGAAATTCTCCAACCCCACCAGTAGGGGAAGGTTTTGTTTTTTGAGCAACACGAATGCCGAGCAATATGCTAACATAGAGTTTGCAGCAGATGGAAAGGTACTTGTGACCCAAGCTTGGTCTGGAGCATTTCTTAACGTTGCAACACAAGAAGCTTTTCAACACTGCAAAGATGCAACGTTCCCAAACATCTATAGTTTGTTGAAGGTGCAGAAATGGACGAGGAAAAAATGCACACACGTCGGTGGGTTTTGGGCTCCGAGCCATGAGAGATACTCTTACAAGGAAAAGGTACATTTAACTGCTAAACCTCTTTTGGAACAAAAAGGAACGTAA

Protein sequence

MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLVTQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKEKVHLTAKPLLEQKGT
Homology
[Close]
BLAST of Bhi10G000492 vs. TrEMBL
Match: tr|A0A0A0LYH4|A0A0A0LYH4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569550 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.8e-16
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           MG ++LTN T RSDQK  +FVTL TKFSNPTS  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 93  MGEKILTNST-RSDQKISSFVTL-TKFSNPTSGERFCFLSNTDNKNDATIDLQADGKYFV 152

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E F   K  +  +++  +KVQ   +K+       WAP   R + + 
Sbjct: 153 -PAWSVSILDGCNKEVFNTAKINSQTSMF--VKVQ--NKKENAQFSWVWAPEPMRDTLQG 212

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 213 KGTFKANLLLEQKGT 220

[Close]
BLAST of Bhi10G000492 vs. TrEMBL
Match: tr|A0A1S3BQ87|A0A1S3BQ87_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 60/135 (44.44%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           MG ++LTN T RSDQK  +F+TL TKFSNPT+  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 456 MGEKILTNST-RSDQKISSFITL-TKFSNPTTGERFCFLSNTDNKNDATIDLQADGKYFV 515

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E F   K  +  +++  +KVQ   +K+       WAP   R + + 
Sbjct: 516 -PAWSVSILDSCNKEVFNTAKINSQTSMF--VKVQ--NKKENAQFSWVWAPEPMRDTLQG 575

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 576 KGTFKANLLLEQKGT 583

[Close]
BLAST of Bhi10G000492 vs. TrEMBL
Match: tr|A0A1S3BA81|A0A1S3BA81_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103487469 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           +G ++LTNG+ RSD+KF +FVTL TKFSNP +  RFCFLSNTN    A ++  ADGK  V
Sbjct: 340 LGEKILTNGS-RSDKKFGSFVTL-TKFSNPITGERFCFLSNTNDTNDATVDLKADGKYFV 399

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + LN   +E F      +  +++  +KVQ    K+   +   WAP     + + 
Sbjct: 400 -PAWSVSILNGCKKEVFNTANINSQTSMF--VKVQ--NEKENAQLSWVWAPEAMTDTLQG 459

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 460 KGTFKANLLLEQKGT 467

[Close]
BLAST of Bhi10G000492 vs. TrEMBL
Match: tr|A0A0A0LXX7|A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13
Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           +G ++LTNGT  S++ F +FVTL TKFSNPT++ RFCFLSNT+    A I+  ADGK  V
Sbjct: 319 LGEKILTNGT-HSNKTFGSFVTL-TKFSNPTTKERFCFLSNTDGTNDATIDLQADGKYFV 378

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + ++   +E F   K  +  +I+  +KVQ    K+   +   WAP     + + 
Sbjct: 379 -PAWSVSIIDGCKKEVFNTAKINSQTSIF--VKVQ--NEKENVKLSWVWAPEAMSDTLQG 438

Query: 121 KVHLTAKPLLEQKGT 136
           K       LLEQKGT
Sbjct: 439 KGTFKENLLLEQKGT 446

[Close]
BLAST of Bhi10G000492 vs. TrEMBL
Match: tr|A0A1S3BT39|A0A1S3BT39_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103493239 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.2e-12
Identity = 53/133 (39.85%), Postives = 73/133 (54.89%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           +G ++LTNGT RSDQ F   VTL TKF NPT+  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 337 LGEKILTNGT-RSDQNFGNSVTL-TKFFNPTTGERFCFLSNTDGKNDATIDLQADGKYFV 396

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E +   K     N  + + V++   K+   +   WAP   + + + 
Sbjct: 397 -PAWSVSILDGCNKEVYNTAK----VNSQTSMFVKEKNEKENVQLSWAWAPEPMKDTLQG 456

Query: 121 KVHLTAKPLLEQK 134
                A  LLEQK
Sbjct: 457 NGKFAANLLLEQK 462

[Close]
BLAST of Bhi10G000492 vs. NCBI nr
Match: KGN66079.1 (hypothetical protein Csa_1G569550 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-16
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           MG ++LTN T RSDQK  +FVTL TKFSNPTS  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 93  MGEKILTNST-RSDQKISSFVTL-TKFSNPTSGERFCFLSNTDNKNDATIDLQADGKYFV 152

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E F   K  +  +++  +KVQ   +K+       WAP   R + + 
Sbjct: 153 -PAWSVSILDGCNKEVFNTAKINSQTSMF--VKVQ--NKKENAQFSWVWAPEPMRDTLQG 212

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 213 KGTFKANLLLEQKGT 220

[Close]
BLAST of Bhi10G000492 vs. NCBI nr
Match: XP_004135782.2 (PREDICTED: beta-galactosidase 15-like [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-16
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           MG ++LTN T RSDQK  +FVTL TKFSNPTS  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 352 MGEKILTNST-RSDQKISSFVTL-TKFSNPTSGERFCFLSNTDNKNDATIDLQADGKYFV 411

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E F   K  +  +++  +KVQ   +K+       WAP   R + + 
Sbjct: 412 -PAWSVSILDGCNKEVFNTAKINSQTSMF--VKVQ--NKKENAQFSWVWAPEPMRDTLQG 471

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 472 KGTFKANLLLEQKGT 479

[Close]
BLAST of Bhi10G000492 vs. NCBI nr
Match: XP_008451143.1 (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 60/135 (44.44%), Postives = 80/135 (59.26%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           MG ++LTN T RSDQK  +F+TL TKFSNPT+  RFCFLSNT+ +  A I+  ADGK  V
Sbjct: 456 MGEKILTNST-RSDQKISSFITL-TKFSNPTTGERFCFLSNTDNKNDATIDLQADGKYFV 515

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + L+   +E F   K  +  +++  +KVQ   +K+       WAP   R + + 
Sbjct: 516 -PAWSVSILDSCNKEVFNTAKINSQTSMF--VKVQ--NKKENAQFSWVWAPEPMRDTLQG 575

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 576 KGTFKANLLLEQKGT 583

[Close]
BLAST of Bhi10G000492 vs. NCBI nr
Match: XP_008444022.1 (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           +G ++LTNG+ RSD+KF +FVTL TKFSNP +  RFCFLSNTN    A ++  ADGK  V
Sbjct: 340 LGEKILTNGS-RSDKKFGSFVTL-TKFSNPITGERFCFLSNTNDTNDATVDLKADGKYFV 399

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + LN   +E F      +  +++  +KVQ    K+   +   WAP     + + 
Sbjct: 400 -PAWSVSILNGCKKEVFNTANINSQTSMF--VKVQ--NEKENAQLSWVWAPEAMTDTLQG 459

Query: 121 KVHLTAKPLLEQKGT 136
           K    A  LLEQKGT
Sbjct: 460 KGTFKANLLLEQKGT 467

[Close]
BLAST of Bhi10G000492 vs. NCBI nr
Match: XP_004139151.2 (PREDICTED: beta-galactosidase 7-like [Cucumis sativus] >KGN66613.1 hypothetical protein Csa_1G643050 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13
Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 1   MGREVLTNGTLRSDQKFVAFVTLTTKFSNPTSRGRFCFLSNTNAEQYANIEFAADGKVLV 60
           +G ++LTNGT  S++ F +FVTL TKFSNPT++ RFCFLSNT+    A I+  ADGK  V
Sbjct: 319 LGEKILTNGT-HSNKTFGSFVTL-TKFSNPTTKERFCFLSNTDGTNDATIDLQADGKYFV 378

Query: 61  TQAWSGAFLNVATQEAFQHCKDATFPNIYSLLKVQKWTRKKCTHVGGFWAPSHERYSYKE 120
             AWS + ++   +E F   K  +  +I+  +KVQ    K+   +   WAP     + + 
Sbjct: 379 -PAWSVSIIDGCKKEVFNTAKINSQTSIF--VKVQ--NEKENVKLSWVWAPEAMSDTLQG 438

Query: 121 KVHLTAKPLLEQKGT 136
           K       LLEQKGT
Sbjct: 439 KGTFKENLLLEQKGT 446

The following BLAST results are available for this feature:
BLAST of Bhi10G000492 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi10G000492 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10G000492 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYH4|A0A0A0LYH4_CUCSA4.8e-1645.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569550 PE=4 SV=1[more]
tr|A0A1S3BQ87|A0A1S3BQ87_CUCME1.1e-1544.44Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1[more]
tr|A0A1S3BA81|A0A1S3BA81_CUCME2.0e-1442.96Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103487469 PE=3 SV=1[more]
tr|A0A0A0LXX7|A0A0A0LXX7_CUCSA2.2e-1341.48Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G643050 PE=3 SV=1[more]
tr|A0A1S3BT39|A0A1S3BT39_CUCME7.2e-1239.85Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103493239 PE=3 SV=1[more]
BLAST of Bhi10G000492 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66079.17.2e-1645.93hypothetical protein Csa_1G569550 [Cucumis sativus][more]
XP_004135782.27.2e-1645.93PREDICTED: beta-galactosidase 15-like [Cucumis sativus][more]
XP_008451143.11.6e-1544.44PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
XP_008444022.13.0e-1442.96PREDICTED: beta-galactosidase-like [Cucumis melo][more]
XP_004139151.23.4e-1341.48PREDICTED: beta-galactosidase 7-like [Cucumis sativus] >KGN66613.1 hypothetical ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR001944Glycoside_Hdrlase_35
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000492Bhi10M000492mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 2..134
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 2..134

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G000492Wax gourdwgowgoB006
Bhi10G000492Cucumber (Gy14) v1cgywgoB039
Bhi10G000492Cucumber (Gy14) v1cgywgoB613
Bhi10G000492Cucumber (Gy14) v2cgybwgoB312
Bhi10G000492Cucumber (Gy14) v2cgybwgoB570
Bhi10G000492Cucumber (Gy14) v2cgybwgoB582
Bhi10G000492Cucurbita maxima (Rimu)cmawgoB0244
Bhi10G000492Cucurbita maxima (Rimu)cmawgoB0692
Bhi10G000492Cucurbita maxima (Rimu)cmawgoB0756
Bhi10G000492Cucurbita maxima (Rimu)cmawgoB1033
Bhi10G000492Cucurbita moschata (Rifu)cmowgoB0238
Bhi10G000492Cucurbita moschata (Rifu)cmowgoB0686
Bhi10G000492Cucurbita moschata (Rifu)cmowgoB0746
Bhi10G000492Cucurbita moschata (Rifu)cmowgoB1028
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0353
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0542
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0543
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0628
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0807
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB0943
Bhi10G000492Cucurbita pepo (Zucchini)cpewgoB1125
Bhi10G000492Wild cucumber (PI 183967)cpiwgoB325
Bhi10G000492Wild cucumber (PI 183967)cpiwgoB603
Bhi10G000492Wild cucumber (PI 183967)cpiwgoB614
Bhi10G000492Cucumber (Chinese Long) v3cucwgoB329
Bhi10G000492Cucumber (Chinese Long) v3cucwgoB619
Bhi10G000492Cucumber (Chinese Long) v3cucwgoB631
Bhi10G000492Cucumber (Chinese Long) v2cuwgoB322
Bhi10G000492Cucumber (Chinese Long) v2cuwgoB598
Bhi10G000492Cucumber (Chinese Long) v2cuwgoB609
Bhi10G000492Bottle gourd (USVL1VR-Ls)lsiwgoB068
Bhi10G000492Bottle gourd (USVL1VR-Ls)lsiwgoB328
Bhi10G000492Bottle gourd (USVL1VR-Ls)lsiwgoB370
Bhi10G000492Melon (DHL92) v3.6.1medwgoB131
Bhi10G000492Melon (DHL92) v3.6.1medwgoB419
Bhi10G000492Melon (DHL92) v3.5.1mewgoB128
Bhi10G000492Melon (DHL92) v3.5.1mewgoB416
Bhi10G000492Watermelon (Charleston Gray)wcgwgoB117
Bhi10G000492Watermelon (Charleston Gray)wcgwgoB301
Bhi10G000492Watermelon (97103) v2wgowmbB348
Bhi10G000492Watermelon (97103) v2wgowmbB371
Bhi10G000492Watermelon (97103) v1wgowmB360
Bhi10G000492Watermelon (97103) v1wgowmB398
Bhi10G000492Silver-seed gourdcarwgoB0206
Bhi10G000492Silver-seed gourdcarwgoB0392
Bhi10G000492Silver-seed gourdcarwgoB0419
Bhi10G000492Silver-seed gourdcarwgoB1169