Bhi10G000288 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G000288
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr10 : 8035571 .. 8035978 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGGAATGCTCATGCTGCAAAATATTTCATCATCTCCAAAAATGTGCTCTCTATCCTTTTCCCTAAATTTCCTAGTTGGTATCAGAGCCTCTCAGCAAACATCGTGGGTGACACAATAGAAAGCTCAACGACCGGTAAGAACACCAAGGCTGCTAATGTTTCCTCTTCATCTACAGTTACGAACGTTATTAGCTCCTCATTTGGTCACACGCTGAGCACTGTCCTCATTGTCAAGCTTGATGAGAAAAAATACCTTCTGTGGCGAGGGATGGTCCTTGCTATGCTGAGAAGGCAAAAGGTAGATGGGTATGTGCTTGGCACAAAAACGCAACCATCTGAGTTTTTAGACTCAAGGAAAGGAACCAAAGATAGTGGAAATCTTGTCCCAAATCCTCAATATTAA

mRNA sequence

ATGGAATGGAATGCTCATGCTGCAAAATATTTCATCATCTCCAAAAATGTGCTCTCTATCCTTTTCCCTAAATTTCCTAGTTGGTATCAGAGCCTCTCAGCAAACATCGTGGGTGACACAATAGAAAGCTCAACGACCGGTAAGAACACCAAGGCTGCTAATGTTTCCTCTTCATCTACAGTTACGAACGTTATTAGCTCCTCATTTGGTCACACGCTGAGCACTGTCCTCATTGTCAAGCTTGATGAGAAAAAATACCTTCTGTGGCGAGGGATGGTCCTTGCTATGCTGAGAAGGCAAAAGGTAGATGGGTATGTGCTTGGCACAAAAACGCAACCATCTGAGTTTTTAGACTCAAGGAAAGGAACCAAAGATAGTGGAAATCTTGTCCCAAATCCTCAATATTAA

Coding sequence (CDS)

ATGGAATGGAATGCTCATGCTGCAAAATATTTCATCATCTCCAAAAATGTGCTCTCTATCCTTTTCCCTAAATTTCCTAGTTGGTATCAGAGCCTCTCAGCAAACATCGTGGGTGACACAATAGAAAGCTCAACGACCGGTAAGAACACCAAGGCTGCTAATGTTTCCTCTTCATCTACAGTTACGAACGTTATTAGCTCCTCATTTGGTCACACGCTGAGCACTGTCCTCATTGTCAAGCTTGATGAGAAAAAATACCTTCTGTGGCGAGGGATGGTCCTTGCTATGCTGAGAAGGCAAAAGGTAGATGGGTATGTGCTTGGCACAAAAACGCAACCATCTGAGTTTTTAGACTCAAGGAAAGGAACCAAAGATAGTGGAAATCTTGTCCCAAATCCTCAATATTAA

Protein sequence

MEWNAHAAKYFIISKNVLSILFPKFPSWYQSLSANIVGDTIESSTTGKNTKAANVSSSSTVTNVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYVLGTKTQPSEFLDSRKGTKDSGNLVPNPQY

Homology

[Close]

BLAST of Bhi10G000288 vs. TrEMBL
Match: tr|A0A0A0LXU0|A0A0A0LXU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477520 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.9e-11
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 42  ESSTTGKNTKAANVSSSSTVT-NVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQ 101
           E++TT   TK  N S +   T   I++SFGH L T L +KLD+KK+ LWRGMVLA+LR Q
Sbjct: 8   ENNTT---TKIQNTSVTIAPTYTAINTSFGHPLDTSLSIKLDDKKFGLWRGMVLAVLRGQ 67

Query: 102 KVDGYVLGTKTQPSEFLDSRKGTKDSGNLVPNP 134
           KVDGYVLG K+QP + L S      S +++  P
Sbjct: 68  KVDGYVLGAKSQPPQSLKSNDEASSSTSVLIQP 97

[Close]

BLAST of Bhi10G000288 vs. TrEMBL
Match: tr|A0A1S2Z159|A0A1S2Z159_CICAR (uncharacterized protein LOC101488260 OS=Cicer arietinum OX=3827 GN=LOC101488260 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 57  SSSTVTNVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYVLGTKTQPSEF 116
           S S  ++  +++  + L T + VKLD   YLLW+ +VL ++R  K+DGY++GTK  P +F
Sbjct: 1   SRSNKSSAANTNHKNDLPTTVSVKLDRDNYLLWKSLVLPLIRGCKLDGYIIGTKECPEQF 60

Query: 117 LDSRKGTKDSGNLVPNPQY 136
           + +   TK +     NP Y
Sbjct: 61  ISTNDTTKKN-----NPDY 74

[Close]

BLAST of Bhi10G000288 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 66  SSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYVLGTKTQPSEFLDSRKGTKD 125
           ++SFGH L TVL VKLD+K Y LWRGMVLA+LR QK DGYVLGT  +P +FL S +    
Sbjct: 31  NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90

Query: 126 SGNLVPNPQY 136
           S +L  NP+Y
Sbjct: 91  SDHLQVNPEY 100

[Close]

BLAST of Bhi10G000288 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 66  SSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYVLGTKTQPSEFLDSRKGTKD 125
           ++SFGH L TVL VKLD+K Y LWRGMVLA+LR QK DGYVLGT  +P +FL S +    
Sbjct: 31  NTSFGHPLGTVLTVKLDDKNYSLWRGMVLAVLRGQKFDGYVLGTLAKPPQFLVSPETEGT 90

Query: 126 SGNLVPNPQY 136
           S +L  NP+Y
Sbjct: 91  SDHLQVNPEY 100

[Close]

BLAST of Bhi10G000288 vs. NCBI nr
Match: XP_022143579.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 47  GKNTKAANVSSSSTVTNVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYV 106
           G +    N S  +TV + I+ SFGH LST L VKLD+K Y LW+GMVLA+L  QKVDGYV
Sbjct: 5   GFSGSTTNNSQQATVFSAINISFGHPLSTALTVKLDDKNYTLWKGMVLAVLPGQKVDGYV 64

Query: 107 LGTKTQPSEFLDSRKGTKDSGNLVP--NPQY 136
           L TKT PS++  +   T D+G L P  NP Y
Sbjct: 65  LRTKTCPSKYTTT---TSDTGMLEPTLNPAY 92

[Close]

BLAST of Bhi10G000288 vs. NCBI nr
Match: KGN65642.1 (hypothetical protein Csa_1G477520 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 42  ESSTTGKNTKAANVSSSSTVT-NVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQ 101
           E++TT   TK  N S +   T   I++SFGH L T L +KLD+KK+ LWRGMVLA+LR Q
Sbjct: 8   ENNTT---TKIQNTSVTIAPTYTAINTSFGHPLDTSLSIKLDDKKFGLWRGMVLAVLRGQ 67

Query: 102 KVDGYVLGTKTQPSEFLDSRKGTKDSGNLVPNP 134
           KVDGYVLG K+QP + L S      S +++  P
Sbjct: 68  KVDGYVLGAKSQPPQSLKSNDEASSSTSVLIQP 97

[Close]

BLAST of Bhi10G000288 vs. NCBI nr
Match: XP_004513130.2 (PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum])

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 57  SSSTVTNVISSSFGHTLSTVLIVKLDEKKYLLWRGMVLAMLRRQKVDGYVLGTKTQPSEF 116
           S S  ++  +++  + L T + VKLD   YLLW+ +VL ++R  K+DGY++GTK  P +F
Sbjct: 1   SRSNKSSAANTNHKNDLPTTVSVKLDRDNYLLWKSLVLPLIRGCKLDGYIIGTKECPEQF 60

Query: 117 LDSRKGTKDSGNLVPNPQY 136
           + +   TK +     NP Y
Sbjct: 61  ISTNDTTKKN-----NPDY 74

The following BLAST results are available for this feature:

BLAST of Bhi10G000288 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10G000288 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G000288 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXU0\|A0A0A0LXU0_CUCSA	7.9e-11	50.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477520 PE=4 SV=1	[more]
tr\|A0A1S2Z159\|A0A1S2Z159_CICAR	1.4e-04	36.71	uncharacterized protein LOC101488260 OS=Cicer arietinum OX=3827 GN=LOC101488260 ...	[more]

BLAST of Bhi10G000288 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157748.1	1.3e-12	60.00	uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]	[more]
XP_022157750.1	1.3e-12	60.00	uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]	[more]
XP_022143579.1	2.2e-12	53.85	ankyrin repeat-containing protein NPR4-like [Momordica charantia]	[more]
KGN65642.1	1.2e-10	50.54	hypothetical protein Csa_1G477520 [Cucumis sativus]	[more]
XP_004513130.2	2.2e-04	36.71	PREDICTED: uncharacterized protein LOC101488260, partial [Cicer arietinum]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000288	Bhi10M000288	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..135

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G000288	Cucumber (Gy14) v1	cgywgoB066
Bhi10G000288	Cucumber (Gy14) v1	cgywgoB277
Bhi10G000288	Cucumber (Gy14) v2	cgybwgoB373
Bhi10G000288	Cucurbita maxima (Rimu)	cmawgoB0693
Bhi10G000288	Cucurbita maxima (Rimu)	cmawgoB0757
Bhi10G000288	Cucurbita moschata (Rifu)	cmowgoB0687
Bhi10G000288	Cucurbita moschata (Rifu)	cmowgoB0747
Bhi10G000288	Cucurbita pepo (Zucchini)	cpewgoB0354
Bhi10G000288	Cucurbita pepo (Zucchini)	cpewgoB0944
Bhi10G000288	Wild cucumber (PI 183967)	cpiwgoB021
Bhi10G000288	Wild cucumber (PI 183967)	cpiwgoB394
Bhi10G000288	Cucumber (Chinese Long) v3	cucwgoB024
Bhi10G000288	Cucumber (Chinese Long) v3	cucwgoB396
Bhi10G000288	Cucumber (Chinese Long) v2	cuwgoB390
Bhi10G000288	Bottle gourd (USVL1VR-Ls)	lsiwgoB079
Bhi10G000288	Melon (DHL92) v3.6.1	medwgoB485
Bhi10G000288	Melon (DHL92) v3.5.1	mewgoB484
Bhi10G000288	Watermelon (Charleston Gray)	wcgwgoB283
Bhi10G000288	Watermelon (97103) v2	wgowmbB353
Bhi10G000288	Watermelon (97103) v1	wgowmB378
Bhi10G000288	Silver-seed gourd	carwgoB0629
Bhi10G000288	Silver-seed gourd	carwgoB1067