Bhi10G000128 (gene) Wax gourd

Overview
NameBhi10G000128
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 3816641 .. 3817003 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCGTTGACGACGATCATTGCTCGGGGAGAAACAGAAACAAAAGGGAATGCTGGCGGCACGTTTCAGAGGCTATCAAACGTAGAGATGAAGGAGAAAATAAATACGGGCCTATGCTTTAGATGTGACGAGAAATTTAGCTTCGACTATTGCTGCTAGAAAAGGGAGCTACAATTTATGTTTGTATAAGAAGGGGAAGATCTAGTAGAGGAAGGAGAAGAACTCGAGATATTCGAGTATAAACCAGAAGGGAGGTTGCGGGAAGATGCGAAGGAGATTGTGAACCTATTGTTGAACTCGTTGGCGGGATTGAGCTCACATAAAACAATAAAGGTACGGGGAGTCATCGGAGATCGAGAG

mRNA sequence

ATGGGTTCGTTGACGACGATCATTGCTCGGGGAGAAACAGAAACAAAAGGGAATGCTGGCGGCACGTTTCAGAGGCTATCAAACGTAGAGATGAAGGAGAAAATAAATACGGGCCTATGCTTTAGATGGGAAGATCTAGTAGAGGAAGGAGAAGAACTCGAGATATTCGAGTATAAACCAGAAGGGAGGTTGCGGGAAGATGCGAAGGAGATTGTGAACCTATTGTTGAACTCGTTGGCGGGATTGAGCTCACATAAAACAATAAAGGTACGGGGAGTCATCGGAGATCGAGAG

Coding sequence (CDS)

ATGGGTTCGTTGACGACGATCATTGCTCGGGGAGAAACAGAAACAAAAGGGAATGCTGGCGGCACGTTTCAGAGGCTATCAAACGTAGAGATGAAGGAGAAAATAAATACGGGCCTATGCTTTAGATGGGAAGATCTAGTAGAGGAAGGAGAAGAACTCGAGATATTCGAGTATAAACCAGAAGGGAGGTTGCGGGAAGATGCGAAGGAGATTGTGAACCTATTGTTGAACTCGTTGGCGGGATTGAGCTCACATAAAACAATAAAGGTACGGGGAGTCATCGGAGATCGAGAG

Protein sequence

MGSLTTIIARGETETKGNAGGTFQRLSNVEMKEKINTGLCFRWEDLVEEGEELEIFEYKPEGRLREDAKEIVNLLLNSLAGLSSHKTIKVRGVIGDRE
Homology
[Close]
BLAST of Bhi10G000128 vs. TrEMBL
Match: tr|W9R4P8|W9R4P8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024737 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0 

Query: 18  NAGGTFQRLSNVEMKEKINTGLCFRWEDLVEEGEELEIFEYK----------PEGRLRED 77
           N G +F+RLS  E+++K   GLCFR ++    G   ++ + +           E  LRE+
Sbjct: 368 NGGSSFRRLSYEEIQQKRARGLCFRCDEEFSPGHRCKLRQLQVLLVSGEDSDREEDLREE 427

Query: 78  AKEI-----------VNLLLNSLAGLSSHKTIKVRGVIGDRE 99
           + E            V+L LNSL G +S KT+K+RG IGDRE
Sbjct: 428 SAEAATVQGETTKGNVDLSLNSLWGFASAKTMKLRGTIGDRE 469

[Close]
BLAST of Bhi10G000128 vs. NCBI nr
Match: XP_019056647.1 (PREDICTED: uncharacterized protein LOC104801738 isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 0 

Query: 22  TFQRLSNVEMKEKINTGLCFRW--------------------EDLVEEGEELEIFEYKPE 81
           TF+R+S+ E +EK   GLCFR                     E+++E GEEL+  +   E
Sbjct: 111 TFKRMSDAEFEEKRKKGLCFRCDEKFFVGHRCKQKELQVILAEEVMETGEELKEEQDNEE 170

Query: 82  GRLREDAKEIVNLLLNSLAGLSSHKTIKVRGVIGDRE 99
           G + E+  E   L LNS+ GL+S KT+K+RG +GD+E
Sbjct: 171 GNMEEEG-EFAELSLNSVVGLTSPKTLKIRGSVGDQE 206

[Close]
BLAST of Bhi10G000128 vs. NCBI nr
Match: XP_010541181.1 (PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana])

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 39/97 (40.21%), Postives = 50/97 (51.55%), Query Frame = 0 

Query: 22  TFQRLSNVEMKEKINTGLCFRW--------------------EDLVEEGEELEIFEYKPE 81
           TF+R+S+ E +EK   GLCFR                     E++ E GEELE  E   E
Sbjct: 565 TFKRMSDAEFEEKRKKGLCFRCDEKFFVGHRCKQKELQVILAEEITETGEELE-EEQDNE 624

Query: 82  GRLREDAKEIVNLLLNSLAGLSSHKTIKVRGVIGDRE 99
              RED  E   L LNS+ GL+S KT+K+RG I  +E
Sbjct: 625 AGNREDEGEFAELSLNSVVGLTSPKTLKIRGSIEGQE 660

[Close]
BLAST of Bhi10G000128 vs. NCBI nr
Match: XP_010523379.1 (PREDICTED: uncharacterized protein LOC104801738 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0 

Query: 22  TFQRLSNVEMKEKINTGLCFRWEDLVEEGEELEIFEYKP--EGRLREDAKEIVNLLLNSL 81
           TF+R+S+ E +EK   GLCFR ++    G   +  E +      + E  +E   L LNS+
Sbjct: 111 TFKRMSDAEFEEKRKKGLCFRCDEKFFVGHRCKQKELQVILAEEVMETGEEFAELSLNSV 170

Query: 82  AGLSSHKTIKVRGVIGDRE 99
            GL+S KT+K+RG +GD+E
Sbjct: 171 VGLTSPKTLKIRGSVGDQE 189

[Close]
BLAST of Bhi10G000128 vs. NCBI nr
Match: EXB68717.1 (hypothetical protein L484_024737 [Morus notabilis])

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-04
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0 

Query: 18  NAGGTFQRLSNVEMKEKINTGLCFRWEDLVEEGEELEIFEYK----------PEGRLRED 77
           N G +F+RLS  E+++K   GLCFR ++    G   ++ + +           E  LRE+
Sbjct: 368 NGGSSFRRLSYEEIQQKRARGLCFRCDEEFSPGHRCKLRQLQVLLVSGEDSDREEDLREE 427

Query: 78  AKEI-----------VNLLLNSLAGLSSHKTIKVRGVIGDRE 99
           + E            V+L LNSL G +S KT+K+RG IGDRE
Sbjct: 428 SAEAATVQGETTKGNVDLSLNSLWGFASAKTMKLRGTIGDRE 469

The following BLAST results are available for this feature:
BLAST of Bhi10G000128 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi10G000128 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10G000128 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|W9R4P8|W9R4P8_9ROSA1.1e-0436.27Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024737 PE=4 SV=1[more]
BLAST of Bhi10G000128 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_019056647.15.8e-0738.14PREDICTED: uncharacterized protein LOC104801738 isoform X1 [Tarenaya hassleriana... [more]
XP_010541181.11.1e-0540.21PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana][more]
XP_010523379.13.2e-0539.24PREDICTED: uncharacterized protein LOC104801738 isoform X2 [Tarenaya hassleriana... [more]
EXB68717.11.6e-0436.27hypothetical protein L484_024737 [Morus notabilis][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000128Bhi10M000128mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G000128Cucurbita maxima (Rimu)cmawgoB0747
Bhi10G000128Cucurbita moschata (Rifu)cmowgoB0738
Bhi10G000128Cucurbita pepo (Zucchini)cpewgoB0961
Bhi10G000128Silver-seed gourdcarwgoB1068