Bhi10G000086 (gene) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTAGTAAATGTTGAACCACCAACCTTCCCTTCTCTTTTGTATATATCATCCTCCCCGTCCACCTTCAATGACTCAAGAGTCTTCCATGTCCAACGTTTTTTTTTTCAATCTAGTGAGTTGTTTCCATCAACATTACTTTTTCTTTTATTTTCTTTTCCATTTTCTAACTTTTGTTTGTTTGATGAGTGGTATGGTATTATTGTGTTCTTTCACCTTTTGAAGGTGTTAAGGTATGAAACGTTATATCCTCTTAATTCTTATGGTTTATTATACTAATGTATCCATTATTCTTATTTAATCTTTATTATCAAATTTGATCTGAACAACCCTTGGATTCTCCACTTATAGACAATATATAAGTAACATAGTATCACCTTTCTTTCTAAATAAATTCCTTTATTAAATGGTAATTCATTCTTCCTTTTTTTTTTTTTTTGGTAATTTTTTTTCCTTGTTGTACAGCCCAAGTTAATCTAACCTTCCATTAATTTGAGGTTCATGTTGTGTTATATTTCAAGTTTTTACAATCCACTCTCTTTGTAGTACGTTTTAGGATTATTTACATTGTTTTCAACATTCTTTTCTTGTAATTTTGTGTTATTGTTTATTTCATACATTTTTCTTTTTCATTGATAAGCACTATATCTTGTTGGACATTTTGTGTGCATACTGTTTGATTATGAAATTTGATAAGCATTATAATATGTTTAGATTATTACTACTTATGCCTGGATATCCCAATACTGAGGGTTTCTTGGTACTGTATAAAGAAGAACGATATCACCTTTTAGAATGGCGTGGTGCTAGAAACGCACCAACTAATTCAAGAAAATTTTTCAACATGGAACACTCATCCGCTAGGAATTGCATAGAGAGAGCATTTGGCATACTGAAGGGTCAGTGGACAATTCTTCGTGGAAAGTCATTCTACCCAATGAAGATCCAGTGTCGAACAATAACAGCATGTTGCTTGCTTCACAACCTTATCACCAGAAAGATAGAACAGCTGTAATGTTGGAAGCATCGGAGAATAAATACTCTATAACTAATGGATTCGGGGAGGATAATATACAATTTATTGAAATGTCTAATGAATGGACCAACTTTAAGGATGATTTGGCGAGTAGAATATTTGATCCATGGGAACAAGCATCAGGAAGAAATACTTTATCGTTAAAACTGCTTTGTTATGAATTCAACTTTATTTGGCTTTATTTCACATTATTTGTAAGCTTGAACAATTTTCTTGTTTCTTTATAAAATACGTCTTGCGTAATTCG CTTCTAGTAAATGTTGAACCACCAACCTTCCCTTCTCTTTTGTATATATCATCCTCCCCGTCCACCTTCAATGACTCAAGAGTCTTCCATGTCCAACGTTTTTTTTTTCAATCTAGTGAGTTGTTTCCATCAACATTACTTTTTCTTTTATTTTCTTTTCCATTTTCTAACTTTTGTTTGTTTGATGAGTGGTATGGTATTATTGTGTTCTTTCACCTTTTGAAGGTGTTAAGGTATGAAACGTTATATCCTCTTAATTCTTATGGTTTATTATACTAATGTATCCATTATTCTTATTTAATCTTTATTATCAAATTTGATCTGAACAACCCTTGGATTCTCCACTTATAGACAATATATAAGTAACATAGTATCACCTTTCTTTCTAAATAAATTCCTTTATTAAATGGTAATTCATTCTTCCTTTTTTTTTTTTTTTGGTAATTTTTTTTCCTTGTTGTACAGCCCAAGTTAATCTAACCTTCCATTAATTTGAGGTTCATGTTGTGTTATATTTCAAGTTTTTACAATCCACTCTCTTTGTAGTACGTTTTAGGATTATTTACATTGTTTTCAACATTCTTTTCTTGTAATTTTGTGTTATTGTTTATTTCATACATTTTTCTTTTTCATTGATAAGCACTATATCTTGTTGGACATTTTGTGTGCATACTGTTTGATTATGAAATTTGATAAGCATTATAATATGTTTAGATTATTACTACTTATGCCTGGATATCCCAATACTGAGGGTTTCTTGGTACTGTATAAAGAAGAACGATATCACCTTTTAGAATGGCGTGGTGCTAGAAACGCACCAACTAATTCAAGAAAATTTTTCAACATGGAACACTCATCCGCTAGGAATTGCATAGAGAGAGCATTTGGCATACTGAAGGGTCAGTGGACAATTCTTCGTGGAAAGTCATTCTACCCAATGAAGATCCAGTGTCGAACAATAACAGCATGTTGCTTGCTTCACAACCTTATCACCAGAAAGATAGAACAGCTGTAATGTTGGAAGCATCGGAGAATAAATACTCTATAACTAATGGATTCGGGGAGGATAATATACAATTTATTGAAATGTCTAATGAATGGACCAACTTTAAGGATGATTTGGCGAGTAGAATATTTGATCCATGGGAACAAGCATCAGGAAGAAATACTTTATCGTTAAAACTGCTTTGTTATGAATTCAACTTTATTTGGCTTTATTTCACATTATTTGTAAGCTTGAACAATTTTCTTGTTTCTTTATAAAATACGTCTTGCGTAATTCG ATGAAATTTGATAAGCATTATAATATGTTTAGATTATTACTACTTATGCCTGGATATCCCAATACTGAGGGTTTCTTGGTACTGTATAAAGAAGAACGATATCACCTTTTAGAATGGCGTGGTGCTAGAAACGCACCAACTAATTCAAGAAAATTTTTCAACATGGAACACTCATCCGCTAGGAATTGCATAGAGAGAGCATTTGGCATACTGAAGGGTCAGTGGACAATTCTTCGTGGAAAGTCATTCTACCCAATGAAGATCCAGTGTCGAACAATAACAGCATGTTGCTTGCTTCACAACCTTATCACCAGAAAGATAGAACAGCTGTAA MKFDKHYNMFRLLLLMPGYPNTEGFLVLYKEERYHLLEWRGARNAPTNSRKFFNMEHSSARNCIERAFGILKGQWTILRGKSFYPMKIQCRTITACCLLHNLITRKIEQL
BLAST of Bhi10G000086 vs. TAIR10
Match: AT5G35695.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12 Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0
BLAST of Bhi10G000086 vs. TAIR10
Match: AT4G10890.1 (unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 25/76 (32.89%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of Bhi10G000086 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.2e-34 Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Bhi10G000086 vs. TrEMBL
Match: tr|A0A1S3C1U8|A0A1S3C1U8_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.3e-34 Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Bhi10G000086 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.0e-32 Identity = 63/90 (70.00%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Bhi10G000086 vs. TrEMBL
Match: tr|A0A1S3CFM2|A0A1S3CFM2_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103500386 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-32 Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Bhi10G000086 vs. TrEMBL
Match: tr|A0A1S4E2C9|A0A1S4E2C9_CUCME (uncharacterized protein LOC107991657 OS=Cucumis melo OX=3656 GN=LOC107991657 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.1e-32 Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0
BLAST of Bhi10G000086 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 153.3 bits (386), Expect = 4.8e-34 Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Bhi10G000086 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33 Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Bhi10G000086 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 63/90 (70.00%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Bhi10G000086 vs. NCBI nr
Match: XP_008461892.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 146.4 bits (368), Expect = 5.9e-32 Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Bhi10G000086 vs. NCBI nr
Match: XP_016902382.1 (PREDICTED: uncharacterized protein LOC107991657 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32 Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |