Bhi10G000054 (gene) Wax gourd

NameBhi10G000054
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCytochrome c oxidase
Locationchr10 : 1766494 .. 1769621 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATCCGAACTCTAAATTTGTAGTTTTAACCCCAAAGAAAGTAATAAAAACGAAAACGCCTCCCCATCGCAGGCCTTCGCCAATTCCTCGTCTATCCTTCGATTCCCCGTCTGCTGCAGCTCCCGAAGCATTGATTTACCGCTCTCCATTCTCACGTGAGTTTAGCTCCATTCCATGATTTCTTCTTTAGGTCTGGGTGTAAGGTTTTACGAACGCCTTGATAATCTTGTCTTGGATTAGATCTTCGACGATTTAATTGTTATTTTTTTCGTTCTTCCACTACTATCTGGTTAATATGTTTCTCAATTATTTTCATTTGTGATTTATCTATCTATGCACTTGAAATGATTGGTTCCCTTTATCTATTTTGTCTTGCTGTGGTCGTGTTAATTCTTGACGAATGTTTTTAGGTAACCAAGTTTTGTATGTTTTTGTTTACCTATTTATTGAAACATGGAATGGGTTTCACTATACCACTCGTTATTGGAAAATTTCGAGGGAAAAAAAATAAATTTTACTGGATTTATTTTGATGGTTATCATAGGGAGATTTTAATTGACTTTAATGTTTCACAGCACATTTCATTCATATGGGTATTTATTTCTTCGTCCTTCAAAGATGGAAATCGTCTGATTCTTGTTTTCTGTTGTTAAGGGGTAATTGGGAAAAAAGCTGGCTGGGTAGGGGTATGTATTTGAGATTTGTCAAATTGGTGGATCAGATATATGTACTTGTGTGAGAATGAAGATAAATGTAATTGTTAGAAGTGAATTTGTGTTAACTCAGATAAACAATCAATGCACTTAAGATGTTTCTGGTATGTAGGGGCAAAATGTTTTAAAAAGCTATTGAGGTTTATGCCTGATCACCTTGATGCAAGACTGCAAATCTTAATTTTGTAGCCTTTGAGATTTATGCGCCTTCGTAGGAACATGAGAGGCTCATGCCTTGGTGAAACCATATGGAGACTTAAAATCTATACGCCTCAGTGTAATGATTAGAAGAATAATATCGGTTTGCATCGCTCTTAAAAAATATGGTTTGAGCTGTAACCATTTGAACTATTACTACTTTTAATACTGTGACTTTAAAAAATTGAAGACAAAAATTTTGTAGAATAAACTAATCCCATTGATGTTATGTAGTGATGTCTTTGAATTTTTGTTTAAGTGGGGATTGATGAGGGTGAACTTTTGTATACGTTTAGATGACTATTATATTTAGCAATATTTGGTCATGCCAATTTACGATTTGTGAAATGTTTTAAATTAAATTGAAGCCTTGCCTCTTCTAGAGAAAAAAAACTCAAGACCGCCTTTAGCCTTTTAAAACATTGTATGGGGCTCAATGTTGGAAATGACACACGAGAGAATTAGGGATACAACTCATATGATTTAGATAAGCGAGTCGTATTGTGTGGGACCTTGCTAGTGTCTCTTGTTTTAGTATCTGCTGTTGTTCATCAATGCTTGACATTGATGGAAGTTTCAAGTGCCATTCTCTTTGAGCATCGAGTCCCAGAACGATTCTCTTGGTGTTCACTTCATTTGTGGACTAGTTGATGTTTCAACCGTTGGAAATGAAAACTCATGTATGGCAGTGTCTATTTCATCTGTATAGCTTTTATCAACTAGGGCCTTTTGATACATGTTACATTTCAAAGACAGCTAAAACTCTGTGATACGAAAACTCTAGCCAATTGGAATTAGAAATCTTTTTGTATAAGAATCCCTAATTCTCAATCACTAAAACTCCTAGATCAACTAGATTTCAACCCTAAGGATTGAGTTAGACACAGATTGCCTAAGATCAAAGCTCTTGAGACAAGGACAAGTTCCTTAGTCCTAAAATTCAAAGACTGTGATAGGATGATCAATCCCACTTAAGTATTCTTGGTATGCAACTCAATACATGAATTTCAAATTCCAAGAAGCTCTCTTAGCTAAACTTGAAAGAAGCACAAAGGCTAAACTTAATTCATCGTAAAACTTATCAAACAATCCTAAAGGCAAGGCTTTACTAGCCTCCCAAAGAAAACCCTAATGTGTGGTACACCATAAACCTTAGTTCATTATATCAATAATATTAAATAAACTATAATTAATAATTTGATGCTGATCAATTCACTTTGAGTAGTTGTAATTCATTCACTTCTAGAGCTGGCATGGTTGCTAGTTTGTTATCAATGTGCCATGTTTATGAAACTTTATCATTGTAATTGTTCTGTACTCATTGTCTTTGCTTTGGATTCTTTAACGAGGTTTACTATTTTACAAAGGTTATGGTGCACATCTCAAAAGCATATTTTTGTCTATATATTGGATGATTTGGGAGCTGAAAGATGTGGGATAGTAGATTTTTACAATATTGGATTTTACTATTTATTTATTTTTTTGCTTGAATTATAATGTAGAATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATATTTCCAGAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAATTGCTCTTGCAGCCTCATCACTGTATCTTATCGTAAGTTTGCCTCTCTCCAGTGAAGTTGAAGATTTTCTTGCCCATTTCAGATAATGCTAAACGATTTGTCTAACTGTGTCGATCTTGCTCGTGTCTTTCGTACAGGGACGAGGAATTTACAACATGTCGCACGGAATTGGAAAGAAAGAATGAGGTCACTGTCTTTGCATCTAAATTTCAAACACCGTCATGCTTCTTGATCCATGTGAATTTTGTTCTTGAAGCAATTTTTGTTTAATAAATGCTTAGTTCCAGATTCGGCTACTAGTAGAATATTGGATATGATGCTCAGCTTTCTACTGCGTCTCTCCATATTGAACTGTTTGTCTCAGTTTTCCTTTCATGAAATTGTGACTCAGATGATATGTATTGAGATCTAGAAATGAAATGGTGTGCCTATTAGAATGGCTGGGATTTGCTGATCAACATTTTCACATGTTCATGGACTTTCTGAACATAGGGGTGAATATAGGATAGTTCCATTTTGTGAAATATAACTTATAATGAATACCAACTATATATCAATATTGCTAAAGTGAGTTTAGTTCAAC

mRNA sequence

TGGATCCGAACTCTAAATTTGTAGTTTTAACCCCAAAGAAAGTAATAAAAACGAAAACGCCTCCCCATCGCAGGCCTTCGCCAATTCCTCGTCTATCCTTCGATTCCCCGTCTGCTGCAGCTCCCGAAGCATTGATTTACCGCTCTCCATTCTCACAATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATATTTCCAGAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAATTGCTCTTGCAGCCTCATCACTGTATCTTATCGGACGAGGAATTTACAACATGTCGCACGGAATTGGAAAGAAAGAATGAGGTCACTGTCTTTGCATCTAAATTTCAAACACCGTCATGCTTCTTGATCCATGTGAATTTTGTTCTTGAAGCAATTTTTGTTTAATAAATGCTTAGTTCCAGATTCGGCTACTAGTAGAATATTGGATATGATGCTCAGCTTTCTACTGCGTCTCTCCATATTGAACTGTTTGTCTCAGTTTTCCTTTCATGAAATTGTGACTCAGATGATATGTATTGAGATCTAGAAATGAAATGGTGTGCCTATTAGAATGGCTGGGATTTGCTGATCAACATTTTCACATGTTCATGGACTTTCTGAACATAGGGGTGAATATAGGATAGTTCCATTTTGTGAAATATAACTTATAATGAATACCAACTATATATCAATATTGCTAAAGTGAGTTTAGTTCAAC

Coding sequence (CDS)

ATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATATTTCCAGAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGATAAAATCACCTCCGTTGCCATTCCAATTGCTCTTGCAGCCTCATCACTGTATCTTATCGGACGAGGAATTTACAACATGTCGCACGGAATTGGAAAGAAAGAATGA

Protein sequence

MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
BLAST of Bhi10G000054 vs. TAIR10
Match: AT4G21105.1 (cytochrome-c oxidases;electron carriers)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-26
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0

Query: 5  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHG 64
          E PFRPREKL+EKQ+ FQSI +HTYLKGPMDKITSVAIPIALAASSLY+IG GIYNMS+G
Sbjct: 4  ETPFRPREKLLEKQRLFQSIQRHTYLKGPMDKITSVAIPIALAASSLYMIGTGIYNMSNG 63

Query: 65 IGKKE 70
          IGKKE
Sbjct: 64 IGKKE 68

BLAST of Bhi10G000054 vs. TrEMBL
Match: tr|A0A1S3C9H3|A0A1S3C9H3_CUCME (uncharacterized protein LOC103497961 OS=Cucumis melo OX=3656 GN=LOC103497961 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-30
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M EVEQPFRPREKL+EKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. TrEMBL
Match: tr|A0A0A0KDL3|A0A0A0KDL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151660 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M EVEQPFRPREKL+EKQK FQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. TrEMBL
Match: tr|A0A067EKA3|A0A067EKA3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035248mg PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.8e-28
Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M+E E PFRPREKL+EKQK+FQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MSETEVPFRPREKLLEKQKHFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. TrEMBL
Match: tr|V4SAQ5|V4SAQ5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029753mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-27
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M+E E PFRPREKL+EKQK+FQSIHKHTYLKGPMDKITSVAIPIALAAS+LYLIGRGIYN
Sbjct: 1  MSETEVPFRPREKLLEKQKHFQSIHKHTYLKGPMDKITSVAIPIALAASALYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. TrEMBL
Match: tr|A0A2H5Q582|A0A2H5Q582_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_197260 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-27
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M+E E PFRPREKL+EKQK+FQSIHKHTYLKGPMDKITSVAIPIALAAS+LYLIGRGIYN
Sbjct: 4  MSETEVPFRPREKLLEKQKHFQSIHKHTYLKGPMDKITSVAIPIALAASALYLIGRGIYN 63

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 64 MSHGIGKKE 72

BLAST of Bhi10G000054 vs. NCBI nr
Match: XP_008458612.1 (PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo] >XP_008458613.1 PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-29
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M EVEQPFRPREKL+EKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MAEVEQPFRPREKLVEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. NCBI nr
Match: XP_004145797.1 (PREDICTED: uncharacterized protein LOC101208002 isoform X2 [Cucumis sativus] >XP_004145798.1 PREDICTED: uncharacterized protein LOC101208002 isoform X2 [Cucumis sativus] >XP_011657060.1 PREDICTED: uncharacterized protein LOC101208002 isoform X2 [Cucumis sativus] >KGN46929.1 hypothetical protein Csa_6G151660 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 8.5e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M EVEQPFRPREKL+EKQK FQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. NCBI nr
Match: XP_011657059.1 (PREDICTED: uncharacterized protein LOC101208002 isoform X1 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 8.5e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0

Query: 1   MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
           M EVEQPFRPREKL+EKQK FQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 48  MAEVEQPFRPREKLVEKQKIFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 107

Query: 61  MSHGIGKKE 70
           MSHGIGKKE
Sbjct: 108 MSHGIGKKE 116

BLAST of Bhi10G000054 vs. NCBI nr
Match: XP_023532621.1 (uncharacterized protein LOC111794729 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-28
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M   EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MDMTEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

BLAST of Bhi10G000054 vs. NCBI nr
Match: XP_022957674.1 (uncharacterized protein LOC111459140 isoform X1 [Cucurbita moschata] >XP_022996284.1 uncharacterized protein LOC111491558 isoform X1 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 1  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60
          M   EQPFRPREKLIE+QKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN
Sbjct: 1  MDMTEQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYN 60

Query: 61 MSHGIGKKE 70
          MSHGIGKKE
Sbjct: 61 MSHGIGKKE 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G21105.11.3e-2686.15cytochrome-c oxidases;electron carriers[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C9H3|A0A1S3C9H3_CUCME6.6e-3097.10uncharacterized protein LOC103497961 OS=Cucumis melo OX=3656 GN=LOC103497961 PE=... [more]
tr|A0A0A0KDL3|A0A0A0KDL3_CUCSA5.6e-2995.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151660 PE=4 SV=1[more]
tr|A0A067EKA3|A0A067EKA3_CITSI4.8e-2892.75Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035248mg PE=4 SV=1[more]
tr|V4SAQ5|V4SAQ5_9ROSI1.1e-2791.30Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029753mg PE=4 ... [more]
tr|A0A2H5Q582|A0A2H5Q582_CITUN1.1e-2791.30Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_197260 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008458612.11.0e-2997.10PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo] >XP_008458613.1 P... [more]
XP_004145797.18.5e-2995.65PREDICTED: uncharacterized protein LOC101208002 isoform X2 [Cucumis sativus] >XP... [more]
XP_011657059.18.5e-2995.65PREDICTED: uncharacterized protein LOC101208002 isoform X1 [Cucumis sativus][more]
XP_023532621.11.9e-2895.65uncharacterized protein LOC111794729 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022957674.14.2e-2894.20uncharacterized protein LOC111459140 isoform X1 [Cucurbita moschata] >XP_0229962... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR039296Predicted_CoxVII
IPR039297COX7a
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0015992 proton transport
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005746 mitochondrial respiratory chain
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0004871 signal transducer activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000054Bhi10M000054mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039297Cytochrome c oxidase subunit VIIPFAMPF02238COX7acoord: 12..64
e-value: 2.7E-17
score: 62.8
IPR039296Predicted cytochrome c oxidase subunit VIIPANTHERPTHR35308FAMILY NOT NAMEDcoord: 5..69
NoneNo IPR availablePANTHERPTHR35308:SF6SUBFAMILY NOT NAMEDcoord: 5..69

The following gene(s) are paralogous to this gene:

None