Bhi09G001767 (gene) Wax gourd

Overview
NameBhi09G001767
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 58981548 .. 58981817 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGATAGTTTAATTTATTTAACTATCAAATCCTTGAAGTTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGGTAGTTTAATTTATTTAACTATCACAAGGTCGGACATTTCTTATTCTGTTGGTGCTGTTGCTCAGTTTATGGATAAACCATGTGAAGCTTATTTAATTGCAGCAAAGAAGATTCTATGA

mRNA sequence

TTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGATAGTTTAATTTATTTAACTATCAAATCCTTGAAGTTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGGTAGTTTAATTTATTTAACTATCACAAGGTCGGACATTTCTTATTCTGTTGGTGCTGTTGCTCAGTTTATGGATAAACCATGTGAAGCTTATTTAATTGCAGCAAAGAAGATTCTATGA

Coding sequence (CDS)

TTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGATAGTTTAATTTATTTAACTATCAAATCCTTGAAGTTGATTAAGGAAGAAAGAAAACGATTGGCTGATGCAACACCTTTCCAACAACTTGTTGGTAGTTTAATTTATTTAACTATCACAAGGTCGGACATTTCTTATTCTGTTGGTGCTGTTGCTCAGTTTATGGATAAACCATGTGAAGCTTATTTAATTGCAGCAAAGAAGATTCTATGA

Protein sequence

LIKEERKRLADATPFQQLVDSLIYLTIKSLKLIKEERKRLADATPFQQLVGSLIYLTITRSDISYSVGAVAQFMDKPCEAYLIAAKKIL
Homology
[Close]
BLAST of Bhi09G001767 vs. NCBI nr
Match: XP_019149876.1 (PREDICTED: uncharacterized protein LOC109146678 [Ipomoea nil])

HSP 1 Score: 52.4 bits (124), Expect = 9.3e-04
Identity = 34/89 (38.20%), Postives = 44/89 (49.44%), Query Frame = 0 

Query: 1   LIKEERKRLADATPFQQLVDSLIYLTIKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 60
           L K+  K+L DAT F QLV SL YLTI                                R
Sbjct: 158 LTKDRGKKLEDATLFCQLVGSLFYLTI-------------------------------TR 215

Query: 61  SDISYSVGAVAQFMDKPCEAYLIAAKKIL 90
            DISYSVG ++QFM +P +++ +AAK+IL
Sbjct: 218 PDISYSVGVISQFMTEPHDSHFVAAKRIL 215

The following BLAST results are available for this feature:
BLAST of Bhi09G001767 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09G001767 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09G001767 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi09G001767 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_019149876.19.3e-0438.20PREDICTED: uncharacterized protein LOC109146678 [Ipomoea nil][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001767Bhi09M001767mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 29..89
NoneNo IPR availablePANTHERPTHR11439:SF204SUBFAMILY NOT NAMEDcoord: 29..89

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G001767Cucumber (Gy14) v1cgywgoB692
Bhi09G001767Cucumber (Gy14) v2cgybwgoB335
Bhi09G001767Cucurbita maxima (Rimu)cmawgoB0030
Bhi09G001767Cucurbita maxima (Rimu)cmawgoB0619
Bhi09G001767Cucurbita moschata (Rifu)cmowgoB0024
Bhi09G001767Cucurbita moschata (Rifu)cmowgoB0619
Bhi09G001767Cucurbita pepo (Zucchini)cpewgoB0716
Bhi09G001767Cucurbita pepo (Zucchini)cpewgoB0993
Bhi09G001767Wild cucumber (PI 183967)cpiwgoB350
Bhi09G001767Cucumber (Chinese Long) v3cucwgoB352
Bhi09G001767Cucumber (Chinese Long) v2cuwgoB348
Bhi09G001767Bottle gourd (USVL1VR-Ls)lsiwgoB404
Bhi09G001767Melon (DHL92) v3.6.1medwgoB432
Bhi09G001767Melon (DHL92) v3.5.1mewgoB431
Bhi09G001767Watermelon (Charleston Gray)wcgwgoB477
Bhi09G001767Watermelon (97103) v2wgowmbB577
Bhi09G001767Watermelon (97103) v1wgowmB621
Bhi09G001767Silver-seed gourdcarwgoB0120
Bhi09G001767Silver-seed gourdcarwgoB1097