Bhi09G001717 (gene) Wax gourd

NameBhi09G001717
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCytochrome b-c1 complex subunit 7
Locationchr9 : 56676298 .. 56676612 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCCTTTTTACAATCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGCCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCGATTTGATCTGTTAGCTCTTCGAGTCGATTCAATCTGTATGAAGGAGGGTTTGAATCGACTCCCCAGGGAGGTTGTTGATGCGGGCAATCAGCATTTGAAGCGGGCCATGGACCTTTCCATGAAGCATTAG

mRNA sequence

ATGGCGTCCTTTTTACAATCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGCCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCGATTTGATCTGTTAGCTCTTCGAGTCGATTCAATCTGTATGAAGGAGGGTTTGAATCGACTCCCCAGGGAGGTTGTTGATGCGGGCAATCAGCATTTGAAGCGGGCCATGGACCTTTCCATGAAGCATTAG

Coding sequence (CDS)

ATGGCGTCCTTTTTACAATCCTTCATTGACCCAAAGAAGAAGATTGGGGATTCATCGCCAGATCGACCCAATGCCTCCGTAATTATGGTAATTGAAACCCTAATCATTTCTTTTTCTATGCCGTTGATTTCGAATTTTGTTCCGTGGAGATTGATTTTGGGTTGTGTTACTATGTTAGGTCTTCGATTTGATCTGTTAGCTCTTCGAGTCGATTCAATCTGTATGAAGGAGGGTTTGAATCGACTCCCCAGGGAGGTTGTTGATGCGGGCAATCAGCATTTGAAGCGGGCCATGGACCTTTCCATGAAGCATTAG

Protein sequence

MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLGLRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH
BLAST of Bhi09G001717 vs. Swiss-Prot
Match: sp|Q9SUU5|QCR71_ARATH (Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-09
Identity = 44/104 (42.31%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MAS L++FIDPKK                     +    M  IS           +   G
Sbjct: 1   MASLLKAFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  +  S+ +KE +NRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. Swiss-Prot
Match: sp|F4JWS8|QCR72_ARATH (Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-08
Identity = 41/104 (39.42%), Postives = 51/104 (49.04%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQ  +DP+K                     +    M  +SN          +   G
Sbjct: 1   MASFLQRLVDPRK-------------------NFLARMHMKSVSN---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L   +  + +KE LNRLPRE+VDA NQ L RAMDLSMKH
Sbjct: 61  LRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKH 76

BLAST of Bhi09G001717 vs. Swiss-Prot
Match: sp|P48502|QCR7_SOLTU (Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.2e-07
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 60  GLRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           GLR D L   +  + +KE LNRLPRE+VDA NQ L RAMDLSMKH
Sbjct: 33  GLRHDDLYDPMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKH 77

BLAST of Bhi09G001717 vs. TAIR10
Match: AT4G32470.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 44/104 (42.31%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MAS L++FIDPKK                     +    M  IS           +   G
Sbjct: 1   MASLLKAFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  +  S+ +KE +NRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. TAIR10
Match: AT5G25450.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 41/104 (39.42%), Postives = 51/104 (49.04%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQ  +DP+K                     +    M  +SN          +   G
Sbjct: 1   MASFLQRLVDPRK-------------------NFLARMHMKSVSN---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L   +  + +KE LNRLPRE+VDA NQ L RAMDLSMKH
Sbjct: 61  LRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKH 76

BLAST of Bhi09G001717 vs. TrEMBL
Match: tr|A0A0D3A2L3|A0A0D3A2L3_BRAOL (Cytochrome b-c1 complex subunit 7 OS=Brassica oleracea var. oleracea OX=109376 GN=106292799 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.8e-08
Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           M++FLQS IDPKK                       +F   +  N V  RL        G
Sbjct: 1   MSTFLQSLIDPKK-----------------------NFLARMHMNAVSTRL-----RRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  + +++ +KE LNRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLFDQYETMDIKEALNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. TrEMBL
Match: tr|A0A2N9ISI5|A0A2N9ISI5_FAGSY (Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQSF+DPKK                       +  M  ISN          +   G
Sbjct: 1   MASFLQSFLDPKK-------------------NWFAAQHMKSISN---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L      + +KE LNRLPRE++DA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDPYYDLDVKEALNRLPREIIDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. TrEMBL
Match: tr|A0A087GJ05|A0A087GJ05_ARAAL (Cytochrome b-c1 complex subunit 7 OS=Arabis alpina OX=50452 GN=AALP_AA7G187900 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 45/107 (42.06%), Postives = 54/107 (50.47%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNF---VPWRLILGCVT 60
           MASF+Q+FIDPKK                               NF   +  R I   + 
Sbjct: 1   MASFIQAFIDPKK-------------------------------NFLARIHMRTISTRLR 60

Query: 61  MLGLRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
             GLR+D L  +   + +KE +NRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  RYGLRYDDLYDQYYHLDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. TrEMBL
Match: tr|R0H6U8|R0H6U8_9BRAS (Cytochrome b-c1 complex subunit 7 OS=Capsella rubella OX=81985 GN=CARUB_v10002241mg PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQ F+DP+K                     +    M  +SN          +   G
Sbjct: 12  MASFLQRFLDPRK-------------------NFLARMHMKSVSN---------RLRRYG 71

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L   +  + +KE LNRLPRE+VDA NQ LKRAMDLSMKH
Sbjct: 72  LRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLKRAMDLSMKH 87

BLAST of Bhi09G001717 vs. TrEMBL
Match: tr|R0GZC3|R0GZC3_9BRAS (Cytochrome b-c1 complex subunit 7 OS=Capsella rubella OX=81985 GN=CARUB_v10006035mg PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.1e-07
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MAS L+SFIDPKK                     +    M  IS           +   G
Sbjct: 1   MASLLKSFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  +  S+ +KE +NRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. NCBI nr
Match: XP_022730553.1 (cytochrome b-c1 complex subunit 7-2 [Durio zibethinus])

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08
Identity = 46/104 (44.23%), Postives = 55/104 (52.88%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQSF++PKK                     + +  M  ISN          +   G
Sbjct: 1   MASFLQSFLNPKK-------------------NWLAALHMKSISN---------RLRKYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L      + +KE LNRLPRE+VDA NQHLKRAMDLSMKH
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQHLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. NCBI nr
Match: XP_013583913.1 (PREDICTED: cytochrome b-c1 complex subunit 7-1 [Brassica oleracea var. oleracea])

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-08
Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           M++FLQS IDPKK                       +F   +  N V  RL        G
Sbjct: 1   MSTFLQSLIDPKK-----------------------NFLARMHMNAVSTRL-----RRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  + +++ +KE LNRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLFDQYETMDIKEALNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. NCBI nr
Match: XP_018468060.1 (PREDICTED: cytochrome b-c1 complex subunit 7-1 [Raphanus sativus])

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-07
Identity = 45/104 (43.27%), Postives = 55/104 (52.88%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           M++FLQS IDPKK                       +F   +    V  RL        G
Sbjct: 1   MSTFLQSLIDPKK-----------------------NFLARMHMKAVSTRL-----RRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  + +++ +KE LNRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLHDQYENLDIKEALNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. NCBI nr
Match: XP_010432714.1 (PREDICTED: cytochrome b-c1 complex subunit 7-1 [Camelina sativa] >XP_010437908.1 PREDICTED: cytochrome b-c1 complex subunit 7-1 [Camelina sativa])

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-07
Identity = 45/104 (43.27%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           M+SFL+SFIDPKK                     +    M  IS           +   G
Sbjct: 1   MSSFLKSFIDPKK-------------------NFLARMHMKAIST---------RLRRYG 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L  +  S+ +KE +NRLPREVVDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKH 76

BLAST of Bhi09G001717 vs. NCBI nr
Match: XP_022132888.1 (cytochrome b-c1 complex subunit 7-2 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-07
Identity = 48/104 (46.15%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 1   MASFLQSFIDPKKKIGDSSPDRPNASVIMVIETLIISFSMPLISNFVPWRLILGCVTMLG 60
           MASFLQSFIDPKK          N      ++ L        + NF             G
Sbjct: 1   MASFLQSFIDPKK----------NWFARQHMKAL-----SQRLRNF-------------G 60

Query: 61  LRFDLLALRVDSICMKEGLNRLPREVVDAGNQHLKRAMDLSMKH 105
           LR+D L      I +KE LNRLPRE+VDA NQ LKRAMDLSMKH
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKH 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9SUU5|QCR71_ARATH4.5e-0942.31Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE... [more]
sp|F4JWS8|QCR72_ARATH2.9e-0839.42Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE... [more]
sp|P48502|QCR7_SOLTU7.2e-0764.44Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT4G32470.12.5e-1042.31Cytochrome bd ubiquinol oxidase, 14kDa subunit[more]
AT5G25450.11.6e-0939.42Cytochrome bd ubiquinol oxidase, 14kDa subunit[more]
Match NameE-valueIdentityDescription
tr|A0A0D3A2L3|A0A0D3A2L3_BRAOL2.8e-0844.23Cytochrome b-c1 complex subunit 7 OS=Brassica oleracea var. oleracea OX=109376 G... [more]
tr|A0A2N9ISI5|A0A2N9ISI5_FAGSY2.4e-0743.27Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 ... [more]
tr|A0A087GJ05|A0A087GJ05_ARAAL2.4e-0742.06Cytochrome b-c1 complex subunit 7 OS=Arabis alpina OX=50452 GN=AALP_AA7G187900 P... [more]
tr|R0H6U8|R0H6U8_9BRAS3.1e-0741.35Cytochrome b-c1 complex subunit 7 OS=Capsella rubella OX=81985 GN=CARUB_v1000224... [more]
tr|R0GZC3|R0GZC3_9BRAS4.1e-0743.27Cytochrome b-c1 complex subunit 7 OS=Capsella rubella OX=81985 GN=CARUB_v1000603... [more]
Match NameE-valueIdentityDescription
XP_022730553.13.3e-0844.23cytochrome b-c1 complex subunit 7-2 [Durio zibethinus][more]
XP_013583913.14.3e-0844.23PREDICTED: cytochrome b-c1 complex subunit 7-1 [Brassica oleracea var. oleracea][more]
XP_018468060.11.6e-0743.27PREDICTED: cytochrome b-c1 complex subunit 7-1 [Raphanus sativus][more]
XP_010432714.12.8e-0743.27PREDICTED: cytochrome b-c1 complex subunit 7-1 [Camelina sativa] >XP_010437908.1... [more]
XP_022132888.12.8e-0746.15cytochrome b-c1 complex subunit 7-2 [Momordica charantia][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Vocabulary: Cellular Component
TermDefinition
GO:0005750mitochondrial respiratory chain complex III
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR003197QCR7
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component GO:0005750 mitochondrial respiratory chain complex III

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001717Bhi09M001717mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 56..104
e-value: 9.1E-6
score: 25.5
IPR003197Cytochrome b-c1 complex subunit 7PRODOMPD008153coord: 60..104
e-value: 1.0E-10
score: 154.0
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3DG3DSA:1.10.1090.10coord: 34..104
e-value: 4.6E-8
score: 34.7
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILYSSF8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 57..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None