Bhi09G001619 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G001619
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	auxilin-like protein 1
Location	chr9 : 53599931 .. 53600272 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGAGTCTCTGCTTTGTCTTCTCGTTTTGAAGACTACGGTGAGATTTTTGGAAGTTTCCATGCACTTCGTGCTTCCTCGATTTTGATTCTTGATCTTCCTCCTGTTGATGAATCTGGGGTCTTCTTTGACGCTCGGAGCTATGCATTTGACTATACGAAGGTTTTTGGCAGGTTTGATGGTTTGGATTTTGCGATTTCTTATGAAGAACTTGTTGGCCCATCCAAAGGCGTTGATGATGGCTCATCCGACGAAGCTTGGTACGACTACATTTATATTATGCTGGATACTTGTTGGCTTTTGTTGCTTTTGTTCGTTGATTTCTATGGAATGTGTTGA

mRNA sequence

ATGTTTGGAGTCTCTGCTTTGTCTTCTCGTTTTGAAGACTACGGTGAGATTTTTGGAAGTTTCCATGCACTTCGTGCTTCCTCGATTTTGATTCTTGATCTTCCTCCTGTTGATGAATCTGGGGTCTTCTTTGACGCTCGGAGCTATGCATTTGACTATACGAAGGTTTTTGGCAGGTTTGATGGTTTGGATTTTGCGATTTCTTATGAAGAACTTGTTGGCCCATCCAAAGGCGTTGATGATGGCTCATCCGACGAAGCTTGGTACGACTACATTTATATTATGCTGGATACTTGTTGGCTTTTGTTGCTTTTGTTCGTTGATTTCTATGGAATGTGTTGA

Coding sequence (CDS)

ATGTTTGGAGTCTCTGCTTTGTCTTCTCGTTTTGAAGACTACGGTGAGATTTTTGGAAGTTTCCATGCACTTCGTGCTTCCTCGATTTTGATTCTTGATCTTCCTCCTGTTGATGAATCTGGGGTCTTCTTTGACGCTCGGAGCTATGCATTTGACTATACGAAGGTTTTTGGCAGGTTTGATGGTTTGGATTTTGCGATTTCTTATGAAGAACTTGTTGGCCCATCCAAAGGCGTTGATGATGGCTCATCCGACGAAGCTTGGTACGACTACATTTATATTATGCTGGATACTTGTTGGCTTTTGTTGCTTTTGTTCGTTGATTTCTATGGAATGTGTTGA

Protein sequence

MFGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFDGLDFAISYEELVGPSKGVDDGSSDEAWYDYIYIMLDTCWLLLLLFVDFYGMC

Homology

[Close]

BLAST of Bhi09G001619 vs. Swiss-Prot
Match: sp|Q9FWS1|AUL1_ARATH (Auxilin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUL1 PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 6.2e-04
Identity = 25/61 (40.98%), Postives = 34/61 (55.74%), Query Frame = 0


Query: 13  DYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFDGLDFAISYEEL 72
           DYGEIF        SSI  LD+P ++   V  D RS   DY+ VFG     DFA++ +E+
Sbjct: 48  DYGEIFRG-SGPSPSSIPFLDVPELNVGKVKVDVRSSKLDYSSVFGGLGACDFAVTPKEV 107

Query: 73  V 74
           +
Sbjct: 108 I 107

[Close]

BLAST of Bhi09G001619 vs. TAIR10
Match: AT4G36520.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-17
Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHA---LRASSILILDLPPVDESGVFFDARSYAFDYTKVFG 61
           FG   LS R EDY EIF  F+       SSI +LDLP VD+  V+FD RS  FDY +VFG
Sbjct: 56  FGAPTLSPRLEDYCEIFSGFNGSSRAAVSSIPVLDLPLVDDRDVYFDVRSQGFDYREVFG 115

Query: 62  RFDGLDFAISYEELVGPSKGV----DDGSSDEAW 89
            F+ LD A SYEEL    K      D  SSD+AW
Sbjct: 116 GFNDLDLAPSYEELFLQQKSTTVVGDGDSSDDAW 149

[Close]

BLAST of Bhi09G001619 vs. TAIR10
Match: AT1G75310.1 (auxin-like 1 protein)

HSP 1 Score: 45.1 bits (105), Expect = 3.4e-05
Identity = 25/61 (40.98%), Postives = 34/61 (55.74%), Query Frame = 0


Query: 13  DYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFDGLDFAISYEEL 72
           DYGEIF        SSI  LD+P ++   V  D RS   DY+ VFG     DFA++ +E+
Sbjct: 48  DYGEIFRG-SGPSPSSIPFLDVPELNVGKVKVDVRSSKLDYSSVFGGLGACDFAVTPKEV 107

Query: 73  V 74
           +
Sbjct: 108 I 107

[Close]

BLAST of Bhi09G001619 vs. TrEMBL
Match: tr|A0A1S3B1V6|A0A1S3B1V6_CUCME (auxilin-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.0e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. TrEMBL
Match: tr|A0A1S3B1D5|A0A1S3B1D5_CUCME (auxilin-like protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.0e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. TrEMBL
Match: tr|A0A1S3B2G0|A0A1S3B2G0_CUCME (auxilin-like protein 1 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.0e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. TrEMBL
Match: tr|A0A1S3B1U3|A0A1S3B1U3_CUCME (auxilin-like protein 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.0e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. TrEMBL
Match: tr|A0A0A0KM79|A0A0A0KM79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502820 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.3e-34
Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSK +DDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKDIDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. NCBI nr
Match: XP_008440739.1 (PREDICTED: auxilin-like protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. NCBI nr
Match: XP_008440740.1 (PREDICTED: auxilin-like protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. NCBI nr
Match: XP_008440741.1 (PREDICTED: auxilin-like protein 1 isoform X3 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. NCBI nr
Match: XP_008440742.1 (PREDICTED: auxilin-like protein 1 isoform X4 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP V+ES VFFDARS AFDY +VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISY+ELVGPSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYDELVGPSKGVDDGSSDEAW 133

[Close]

BLAST of Bhi09G001619 vs. NCBI nr
Match: XP_022132574.1 (auxilin-like protein 1 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-34
Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 2   FGVSALSSRFEDYGEIFGSFHALRASSILILDLPPVDESGVFFDARSYAFDYTKVFGRFD 61
           FGVSALS RFEDYGEIFGSFHALRASSI ILDLP VDE+ VFFDARS AFDY  VFG FD
Sbjct: 47  FGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVDETEVFFDARSSAFDYADVFGGFD 106

Query: 62  GLDFAISYEELVGPSKGVDDGSSDEAW 89
           GLDFAISYEEL+ PSKGVDDGSSDEAW
Sbjct: 107 GLDFAISYEELIAPSKGVDDGSSDEAW 133

The following BLAST results are available for this feature:

BLAST of Bhi09G001619 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FWS1\|AUL1_ARATH	6.2e-04	40.98	Auxilin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUL1 PE=2 SV=2	[more]

BLAST of Bhi09G001619 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36520.1	3.9e-17	51.06	Chaperone DnaJ-domain superfamily protein	[more]
AT1G75310.1	3.4e-05	40.98	auxin-like 1 protein	[more]

BLAST of Bhi09G001619 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1V6\|A0A1S3B1V6_CUCME	5.0e-35	88.51	auxilin-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 S...	[more]
tr\|A0A1S3B1D5\|A0A1S3B1D5_CUCME	5.0e-35	88.51	auxilin-like protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 S...	[more]
tr\|A0A1S3B2G0\|A0A1S3B2G0_CUCME	5.0e-35	88.51	auxilin-like protein 1 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 S...	[more]
tr\|A0A1S3B1U3\|A0A1S3B1U3_CUCME	5.0e-35	88.51	auxilin-like protein 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485062 PE=4 S...	[more]
tr\|A0A0A0KM79\|A0A0A0KM79_CUCSA	4.3e-34	86.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502820 PE=4 SV=1	[more]

BLAST of Bhi09G001619 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440739.1	7.6e-35	88.51	PREDICTED: auxilin-like protein 1 isoform X1 [Cucumis melo]	[more]
XP_008440740.1	7.6e-35	88.51	PREDICTED: auxilin-like protein 1 isoform X2 [Cucumis melo]	[more]
XP_008440741.1	7.6e-35	88.51	PREDICTED: auxilin-like protein 1 isoform X3 [Cucumis melo]	[more]
XP_008440742.1	7.6e-35	88.51	PREDICTED: auxilin-like protein 1 isoform X4 [Cucumis melo]	[more]
XP_022132574.1	2.2e-34	87.36	auxilin-like protein 1 [Momordica charantia]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0072318	clathrin coat disassembly
biological_process	GO:0072583	clathrin-dependent endocytosis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0031982	vesicle
molecular_function	GO:0030276	clathrin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001619	Bhi09M001619	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23172	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	coord: 2..88
None	No IPR available	PANTHER	PTHR23172:SF42	AUXILIN-LIKE PROTEIN 1-RELATED	coord: 2..88

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G001619	Wax gourd	wgowgoB018
Bhi09G001619	Cucumber (Gy14) v2	cgybwgoB333
Bhi09G001619	Cucurbita maxima (Rimu)	cmawgoB0037
Bhi09G001619	Cucurbita maxima (Rimu)	cmawgoB0603
Bhi09G001619	Cucurbita moschata (Rifu)	cmowgoB0030
Bhi09G001619	Cucurbita moschata (Rifu)	cmowgoB0450
Bhi09G001619	Cucurbita moschata (Rifu)	cmowgoB0545
Bhi09G001619	Cucurbita moschata (Rifu)	cmowgoB0602
Bhi09G001619	Cucurbita pepo (Zucchini)	cpewgoB0728
Bhi09G001619	Cucurbita pepo (Zucchini)	cpewgoB0999
Bhi09G001619	Wild cucumber (PI 183967)	cpiwgoB348
Bhi09G001619	Cucumber (Chinese Long) v3	cucwgoB350
Bhi09G001619	Cucumber (Chinese Long) v2	cuwgoB345
Bhi09G001619	Bottle gourd (USVL1VR-Ls)	lsiwgoB395
Bhi09G001619	Melon (DHL92) v3.6.1	medwgoB435
Bhi09G001619	Melon (DHL92) v3.6.1	medwgoB438
Bhi09G001619	Melon (DHL92) v3.5.1	mewgoB434
Bhi09G001619	Melon (DHL92) v3.5.1	mewgoB436
Bhi09G001619	Watermelon (Charleston Gray)	wcgwgoB473
Bhi09G001619	Watermelon (97103) v2	wgowmbB555
Bhi09G001619	Watermelon (97103) v2	wgowmbB571
Bhi09G001619	Watermelon (97103) v2	wgowmbB573
Bhi09G001619	Watermelon (97103) v1	wgowmB593
Bhi09G001619	Watermelon (97103) v1	wgowmB606
Bhi09G001619	Watermelon (97103) v1	wgowmB617
Bhi09G001619	Silver-seed gourd	carwgoB1050
Bhi09G001619	Silver-seed gourd	carwgoB1199