Bhi09G001537 (gene) Wax gourd

Overview
NameBhi09G001537
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 50224410 .. 50224718 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCATTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGGTGACTCAACGGGATACTACTCCAAAATTTCCCATAGTTTCTCATGGAAGGAAATGGGATTTTTGAGAAAAGGGGTTGGGAACCATGGAAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGAACCAACAACGTTACATATACCATACTGCTATAGAAGACATGAATACCAGTTAGACTACGGGACGCGTACACGCGAAATTGGTGAGCCACTTACTGCCCTTTAA

mRNA sequence

ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCATTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGGTGACTCAACGGGATACTACTCCAAAATTTCCCATAGTTTCTCATGGAAGGAAATGGGATTTTTGAGAAAAGGGGTTGGGAACCATGGAAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGAACCAACAACGTTACATATACCATACTGCTATAGAAGACATGAATACCAGTTAGACTACGGGACGCGTACACGCGAAATTGGTGAGCCACTTACTGCCCTTTAA

Coding sequence (CDS)

ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCATTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGGTGACTCAACGGGATACTACTCCAAAATTTCCCATAGTTTCTCATGGAAGGAAATGGGATTTTTGAGAAAAGGGGTTGGGAACCATGGAAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGAACCAACAACGTTACATATACCATACTGCTATAGAAGACATGAATACCAGTTAGACTACGGGACGCGTACACGCGAAATTGGTGAGCCACTTACTGCCCTTTAA

Protein sequence

MKETADSTVPSSDLGAFERAASPADMIGDSTGYYSKISHSFSWKEMGFLRKGVGNHGKTSNLTVLSNLEPTTLHIPYCYRRHEYQLDYGTRTREIGEPLTAL
Homology
[Close]
BLAST of Bhi09G001537 vs. TrEMBL
Match: tr|A0A0D2PSE2|A0A0D2PSE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G163600 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-32
Identity = 77/100 (77.00%), Postives = 80/100 (80.00%), Query Frame = 0 

Query: 2   KETADSTVPSSDLGAFERAASPADMIGDSTGYYSKISHSFSWKEMGFLRKGVGNHGKTSN 61
           + TADS VPSSDLGAFERAAS      DST    K     +WKEMGFLRKGVGNH +TSN
Sbjct: 82  ERTADSKVPSSDLGAFERAAS----ANDSTDTTQKFP---TWKEMGFLRKGVGNHRRTSN 141

Query: 62  LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRTREIGEPLTA 102
           LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRT EIGE LTA
Sbjct: 142 LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRTPEIGELLTA 174

[Close]
BLAST of Bhi09G001537 vs. NCBI nr
Match: KJB09769.1 (hypothetical protein B456_001G163600 [Gossypium raimondii])

HSP 1 Score: 146.4 bits (368), Expect = 5.4e-32
Identity = 77/100 (77.00%), Postives = 80/100 (80.00%), Query Frame = 0 

Query: 2   KETADSTVPSSDLGAFERAASPADMIGDSTGYYSKISHSFSWKEMGFLRKGVGNHGKTSN 61
           + TADS VPSSDLGAFERAAS      DST    K     +WKEMGFLRKGVGNH +TSN
Sbjct: 82  ERTADSKVPSSDLGAFERAAS----ANDSTDTTQKFP---TWKEMGFLRKGVGNHRRTSN 141

Query: 62  LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRTREIGEPLTA 102
           LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRT EIGE LTA
Sbjct: 142 LTVLSNLEPTTLHIPYCYRRHEYQLDYGTRTPEIGELLTA 174

The following BLAST results are available for this feature:
BLAST of Bhi09G001537 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09G001537 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09G001537 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0D2PSE2|A0A0D2PSE2_GOSRA3.6e-3277.00Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G163600 PE=4 ... [more]
BLAST of Bhi09G001537 vs. NCBI nr
Match NameE-valueIdentityDescription
KJB09769.15.4e-3277.00hypothetical protein B456_001G163600 [Gossypium raimondii][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001537Bhi09M001537mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G001537Cucumber (Gy14) v1cgywgoB670
Bhi09G001537Cucumber (Gy14) v2cgybwgoB679
Bhi09G001537Cucurbita maxima (Rimu)cmawgoB0027
Bhi09G001537Cucurbita maxima (Rimu)cmawgoB0616
Bhi09G001537Cucurbita moschata (Rifu)cmowgoB0021
Bhi09G001537Cucurbita moschata (Rifu)cmowgoB0616
Bhi09G001537Cucurbita pepo (Zucchini)cpewgoB0714
Bhi09G001537Cucurbita pepo (Zucchini)cpewgoB0989
Bhi09G001537Wild cucumber (PI 183967)cpiwgoB722
Bhi09G001537Cucumber (Chinese Long) v3cucwgoB736
Bhi09G001537Cucumber (Chinese Long) v2cuwgoB709
Bhi09G001537Bottle gourd (USVL1VR-Ls)lsiwgoB280
Bhi09G001537Melon (DHL92) v3.6.1medwgoB243
Bhi09G001537Melon (DHL92) v3.5.1mewgoB243
Bhi09G001537Watermelon (Charleston Gray)wcgwgoB063
Bhi09G001537Watermelon (97103) v2wgowmbB609
Bhi09G001537Watermelon (97103) v1wgowmB581
Bhi09G001537Silver-seed gourdcarwgoB0088
Bhi09G001537Silver-seed gourdcarwgoB0519