Bhi09G001536 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G001536
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr9 : 50223054 .. 50223347 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTGGGGGGCGGCATGCTTATCTTATGTGACAACACTACAGAGCGAGTGGCTCTTCTAGGCGGGCTGCTGTGTGACAACACTACAGAGAAAGCGGCGCTTTCGTGTAACATGCTATGGTCTCAACGCCCTTACGAGGTAGTGATGAGTTTCACGCGCTCTAAGCCCGGCCCGCGCGCGGTTAGGAAGATTGGCCACAATCTGAGCGGTACCACCCACCCTACCCTACCACCTATAGGCGGCCGTCCGTCCTACAGCCGCCCGAAAAGGAACTGCAGTGATCTTGAATAG

mRNA sequence

ATGGGAGTGGGGGGCGGCATGCTTATCTTATGTGACAACACTACAGAGCGAGTGGCTCTTCTAGGCGGGCTGCTGTGTGACAACACTACAGAGAAAGCGGCGCTTTCGTGTAACATGCTATGGTCTCAACGCCCTTACGAGGTAGTGATGAGTTTCACGCGCTCTAAGCCCGGCCCGCGCGCGGTTAGGAAGATTGGCCACAATCTGAGCGGTACCACCCACCCTACCCTACCACCTATAGGCGGCCGTCCGTCCTACAGCCGCCCGAAAAGGAACTGCAGTGATCTTGAATAG

Coding sequence (CDS)

ATGGGAGTGGGGGGCGGCATGCTTATCTTATGTGACAACACTACAGAGCGAGTGGCTCTTCTAGGCGGGCTGCTGTGTGACAACACTACAGAGAAAGCGGCGCTTTCGTGTAACATGCTATGGTCTCAACGCCCTTACGAGGTAGTGATGAGTTTCACGCGCTCTAAGCCCGGCCCGCGCGCGGTTAGGAAGATTGGCCACAATCTGAGCGGTACCACCCACCCTACCCTACCACCTATAGGCGGCCGTCCGTCCTACAGCCGCCCGAAAAGGAACTGCAGTGATCTTGAATAG

Protein sequence

MGVGGGMLILCDNTTERVALLGGLLCDNTTEKAALSCNMLWSQRPYEVVMSFTRSKPGPRAVRKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE

Homology

[Close]

BLAST of Bhi09G001536 vs. TrEMBL
Match: tr|A0A2I0HZ63|A0A2I0HZ63_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042609 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-26
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX        SFTRSKPGPRAV
Sbjct: 17  LAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXSFTRSKPGPRAV 76

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NLSGTTHPTLPPIGGRPSYSRPKRNCSDLE
Sbjct: 77  RKIGRNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 111

[Close]

BLAST of Bhi09G001536 vs. TrEMBL
Match: tr|A0A2T7C753|A0A2T7C753_9POAL (Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G264700 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24
Identity = 82/96 (85.42%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 2   GVGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRA 61
           G  GG+LILCDNTTERVALL GXXXXXXXXXXXXXXXXXXX     VVMSFTRSKPGPRA
Sbjct: 18  GSAGGVLILCDNTTERVALLVGXXXXXXXXXXXXXXXXXXXXXXXXVVMSFTRSKPGPRA 77

Query: 62  VRKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           VR+IG  LSGTTHPTL PIGGRPSYSRPKRNCS+LE
Sbjct: 78  VRRIGRYLSGTTHPTLLPIGGRPSYSRPKRNCSNLE 113

[Close]

BLAST of Bhi09G001536 vs. TrEMBL
Match: tr|A0A2K3PKA3|A0A2K3PKA3_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g012423 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-24
Identity = 79/95 (83.16%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX         FTRSKPGP AV
Sbjct: 16  LAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRSKPGPCAV 75

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NLSGTTHPTLPPIGGRP YSRPKRNCSDLE
Sbjct: 76  RKIGRNLSGTTHPTLPPIGGRPFYSRPKRNCSDLE 110

[Close]

BLAST of Bhi09G001536 vs. TrEMBL
Match: tr|A0A0D2PSF5|A0A0D2PSF5_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G164700 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.5e-23
Identity = 76/95 (80.00%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX          TRSKPGPRAV
Sbjct: 60  IAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSKPGPRAV 119

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NL GTTHPTLPPIGGRPSYSRPKRNCS ++
Sbjct: 120 RKIGRNLIGTTHPTLPPIGGRPSYSRPKRNCSAIK 154

[Close]

BLAST of Bhi09G001536 vs. TrEMBL
Match: tr|A0A2N9FFS2|A0A2N9FFS2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13900 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22
Identity = 79/95 (83.16%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 5   GGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAVRK 64
           GG+LILCDNT ERVALLGG XXXXXXXXXXXXXXXXXX         FTRSKPGPRAVRK
Sbjct: 28  GGVLILCDNTPERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRSKPGPRAVRK 87

Query: 65  IGHNLSGTTHPTLPPIGGRP--SYSRPKRNCSDLE 98
           IG NLSGTTHPTLPPIGGR   SYSRPKRNCSDLE
Sbjct: 88  IGRNLSGTTHPTLPPIGGRTSYSYSRPKRNCSDLE 122

[Close]

BLAST of Bhi09G001536 vs. NCBI nr
Match: PKI36987.1 (hypothetical protein CRG98_042609 [Punica granatum])

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX        SFTRSKPGPRAV
Sbjct: 17  LAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXSFTRSKPGPRAV 76

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NLSGTTHPTLPPIGGRPSYSRPKRNCSDLE
Sbjct: 77  RKIGRNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 111

[Close]

BLAST of Bhi09G001536 vs. NCBI nr
Match: PUZ39178.1 (hypothetical protein GQ55_9G264700 [Panicum hallii var. hallii])

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-24
Identity = 82/96 (85.42%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 2   GVGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRA 61
           G  GG+LILCDNTTERVALL GXXXXXXXXXXXXXXXXXXX     VVMSFTRSKPGPRA
Sbjct: 18  GSAGGVLILCDNTTERVALLVGXXXXXXXXXXXXXXXXXXXXXXXXVVMSFTRSKPGPRA 77

Query: 62  VRKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           VR+IG  LSGTTHPTL PIGGRPSYSRPKRNCS+LE
Sbjct: 78  VRRIGRYLSGTTHPTLLPIGGRPSYSRPKRNCSNLE 113

[Close]

BLAST of Bhi09G001536 vs. NCBI nr
Match: PNY15721.1 (hypothetical protein L195_g012423 [Trifolium pratense])

HSP 1 Score: 119.4 bits (298), Expect = 6.8e-24
Identity = 79/95 (83.16%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX         FTRSKPGP AV
Sbjct: 16  LAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRSKPGPCAV 75

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NLSGTTHPTLPPIGGRP YSRPKRNCSDLE
Sbjct: 76  RKIGRNLSGTTHPTLPPIGGRPFYSRPKRNCSDLE 110

[Close]

BLAST of Bhi09G001536 vs. NCBI nr
Match: GAU48486.1 (hypothetical protein TSUD_291710 [Trifolium subterraneum])

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 78/95 (82.11%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 3   VGGGMLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAV 62
           + GG+LILCDNTTERVALLGG XXXXXXXXXXXXXXXXXX         FTRSKPGP AV
Sbjct: 16  LAGGVLILCDNTTERVALLGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRSKPGPCAV 75

Query: 63  RKIGHNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
           RKIG NLSGTTHPTLPP+GGRP YSRPKRNCSDLE
Sbjct: 76  RKIGRNLSGTTHPTLPPLGGRPFYSRPKRNCSDLE 110

[Close]

BLAST of Bhi09G001536 vs. NCBI nr
Match: KZV57263.1 (hypothetical protein F511_16061 [Dorcoceras hygrometricum])

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 7  MLILCDNTTERVALLGGXXXXXXXXXXXXXXXXXXXQRPYEVVMSFTRSKPGPRAVRKIG 66
          MLILCDNTTERVALLGG XXXXXXXXXXX       QRPYE+VMSFTRSKPG   + ++ 
Sbjct: 1  MLILCDNTTERVALLGGQXXXXXXXXXXXSCNIVWSQRPYEIVMSFTRSKPGRLRLGRLA 60

Query: 67 HNLSGTTHPTLPPIGGRPSYSRPKRNCSDLE 98
             SGTTHPTLPPIGGRPSYSRPKRNCSDLE
Sbjct: 61 --ASGTTHPTLPPIGGRPSYSRPKRNCSDLE 89

The following BLAST results are available for this feature:

BLAST of Bhi09G001536 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G001536 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G001536 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I0HZ63\|A0A2I0HZ63_PUNGR	2.8e-26	86.32	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042609 PE=4 SV=1	[more]
tr\|A0A2T7C753\|A0A2T7C753_9POAL	2.6e-24	85.42	Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G26470...	[more]
tr\|A0A2K3PKA3\|A0A2K3PKA3_TRIPR	4.5e-24	83.16	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g012423 PE=4 SV=1	[more]
tr\|A0A0D2PSF5\|A0A0D2PSF5_GOSRA	8.5e-23	80.00	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G1...	[more]
tr\|A0A2N9FFS2\|A0A2N9FFS2_FAGSY	1.9e-22	83.16	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13900 PE=4 SV=1	[more]

BLAST of Bhi09G001536 vs. NCBI nr


Match Name	E-value	Identity	Description
PKI36987.1	4.2e-26	86.32	hypothetical protein CRG98_042609 [Punica granatum]	[more]
PUZ39178.1	4.0e-24	85.42	hypothetical protein GQ55_9G264700 [Panicum hallii var. hallii]	[more]
PNY15721.1	6.8e-24	83.16	hypothetical protein L195_g012423 [Trifolium pratense]	[more]
GAU48486.1	1.2e-23	82.11	hypothetical protein TSUD_291710 [Trifolium subterraneum]	[more]
KZV57263.1	3.4e-23	78.02	hypothetical protein F511_16061 [Dorcoceras hygrometricum]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001536	Bhi09M001536	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..97

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G001536	Silver-seed gourd	carwgoB0088
Bhi09G001536	Silver-seed gourd	carwgoB0519
Bhi09G001536	Cucumber (Gy14) v1	cgywgoB670
Bhi09G001536	Cucumber (Gy14) v2	cgybwgoB679
Bhi09G001536	Cucurbita maxima (Rimu)	cmawgoB0027
Bhi09G001536	Cucurbita maxima (Rimu)	cmawgoB0616
Bhi09G001536	Cucurbita moschata (Rifu)	cmowgoB0021
Bhi09G001536	Cucurbita moschata (Rifu)	cmowgoB0616
Bhi09G001536	Cucurbita pepo (Zucchini)	cpewgoB0714
Bhi09G001536	Cucurbita pepo (Zucchini)	cpewgoB0989
Bhi09G001536	Wild cucumber (PI 183967)	cpiwgoB722
Bhi09G001536	Cucumber (Chinese Long) v3	cucwgoB736
Bhi09G001536	Cucumber (Chinese Long) v2	cuwgoB709
Bhi09G001536	Bottle gourd (USVL1VR-Ls)	lsiwgoB280
Bhi09G001536	Melon (DHL92) v3.6.1	medwgoB243
Bhi09G001536	Melon (DHL92) v3.5.1	mewgoB243
Bhi09G001536	Watermelon (Charleston Gray)	wcgwgoB063
Bhi09G001536	Watermelon (97103) v2	wgowmbB609
Bhi09G001536	Watermelon (97103) v1	wgowmB581