Bhi09G001513 (gene) Wax gourd

NameBhi09G001513
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRetrotransposon gag protein
Locationchr9 : 49174602 .. 49175097 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGCCATTGATGCTTTGGGTACCCAAGTCTCTCAGCTAGCCACTTTGATGAGCAAGTCGGAAAGACAATCTGGGAAACTCCCATCTCAGCCAGAACTGAATCCCAAGGAGAATGTGAGTGCAATAATGCTCAGGAGCGGCAAGGAGTTGGAGACACCTGCAGAAATTGTGGAAAAGCCAGAATTGGAGGAACAAAGGACCACTTCTCCAAATCCTACAATCACACCACAAGAAAAGAAAAAAGGAGTATCAGTATCCTCTAACTCTCTTCCCTCATTAAATGCTTATGTGCCTGAAGCACCTTTTCCTTCTAGGCTTGCAAGGCCAAAGGAGCTCACAGGAGACAAGGATAAGGAGCTATTGGATAAGTTCAAAAGAGTGGAAATCAACATTCCTCTCATCGATGTCGTTAAGCAAATCCCAAAGTATGCCAAGTTCCTTAAAGAAGTATGCACAAGGAAGAGGCAAGCGAAAGAAAAAGAGAGGATGGTGGTAA

mRNA sequence

AATGCCATTGATGCTTTGGGTACCCAAGTCTCTCAGCTAGCCACTTTGATGAGCAAGTCGGAAAGACAATCTGGGAAACTCCCATCTCAGCCAGAACTGAATCCCAAGGAGAATGTGAGTGCAATAATGCTCAGGAGCGGCAAGGAGTTGGAGACACCTGCAGAAATTGTGGAAAAGCCAGAATTGGAGGAACAAAGGACCACTTCTCCAAATCCTACAATCACACCACAAGAAAAGAAAAAAGGAGTATCAGTATCCTCTAACTCTCTTCCCTCATTAAATGCTTATGTGCCTGAAGCACCTTTTCCTTCTAGGCTTGCAAGGCCAAAGGAGCTCACAGGAGACAAGGATAAGGAGCTATTGGATAAGTTCAAAAGAGTGGAAATCAACATTCCTCTCATCGATGTCAAGTATGCACAAGGAAGAGGCAAGCGAAAGAAAAAGAGAGGATGGTGGTAA

Coding sequence (CDS)

AATGCCATTGATGCTTTGGGTACCCAAGTCTCTCAGCTAGCCACTTTGATGAGCAAGTCGGAAAGACAATCTGGGAAACTCCCATCTCAGCCAGAACTGAATCCCAAGGAGAATGTGAGTGCAATAATGCTCAGGAGCGGCAAGGAGTTGGAGACACCTGCAGAAATTGTGGAAAAGCCAGAATTGGAGGAACAAAGGACCACTTCTCCAAATCCTACAATCACACCACAAGAAAAGAAAAAAGGAGTATCAGTATCCTCTAACTCTCTTCCCTCATTAAATGCTTATGTGCCTGAAGCACCTTTTCCTTCTAGGCTTGCAAGGCCAAAGGAGCTCACAGGAGACAAGGATAAGGAGCTATTGGATAAGTTCAAAAGAGTGGAAATCAACATTCCTCTCATCGATGTCAAGTATGCACAAGGAAGAGGCAAGCGAAAGAAAAAGAGAGGATGGTGGTAA

Protein sequence

NAIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPELEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKDKELLDKFKRVEINIPLIDVKYAQGRGKRKKKRGWW
BLAST of Bhi09G001513 vs. TrEMBL
Match: tr|A0A1U8BPS3|A0A1U8BPS3_NELNU (uncharacterized protein LOC104613215 OS=Nelumbo nucifera OX=4432 GN=LOC104613215 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.8e-15
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQS-GKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKP 61
           +I  L  Q+ Q+AT +S  E QS GKLPSQ  +NPKENVSAI+LRSGKE+ETPA+     
Sbjct: 24  SIQRLDNQMGQMATTISWLEAQSLGKLPSQTVVNPKENVSAIVLRSGKEVETPAKAA--- 83

Query: 62  ELEEQRTTSPNPTITPQEKKKGV-----SVSSNSLPSLNAYVPEAPFPSRLARPKELTGD 121
                      P ++ QEK+K +      V     P+L+ Y P  PFP  LA  ++   +
Sbjct: 84  -----------PALSKQEKEKDIIPNDDEVPKCKFPTLSDYKPVPPFPHALAEFRK--DE 143

Query: 122 KDKELLDKFKRVEINIPLID 136
           + K+  + F+R EINIPL+D
Sbjct: 144 QFKDFYETFRRCEINIPLLD 147

BLAST of Bhi09G001513 vs. TrEMBL
Match: tr|A0A2G9I3Q1|A0A2G9I3Q1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02876 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-14
Identity = 57/134 (42.54%), Postives = 82/134 (61.19%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPE 61
           +I  L  QVSQLAT +++ E Q GKLPSQ  +NPK+NVSAI+LR+GKEL+ P +  ++  
Sbjct: 253 SIQNLERQVSQLATSVNRLESQ-GKLPSQTVVNPKQNVSAIVLRNGKELKEPIKTAQRNS 312

Query: 62  LEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKDKELL 121
           LE++         +  +K  G   SS         V   PFP R A+ K+   +KDKE+ 
Sbjct: 313 LEKEAEKEVTVPSSQPQKPDGEKPSS--------IVMHPPFPERFAKSKK--EEKDKEIF 372

Query: 122 DKFKRVEINIPLID 136
           + F++VE+NIPL+D
Sbjct: 373 ETFRKVEVNIPLLD 375

BLAST of Bhi09G001513 vs. TrEMBL
Match: tr|A0A2G9HVP4|A0A2G9HVP4_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05712 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPE 61
           +I  L  QVSQLAT +++ E Q GKLPSQ  +NPK+N+SAI+LR+ KEL+ P ++ ++  
Sbjct: 283 SIQNLERQVSQLATSVNRLESQ-GKLPSQTIVNPKQNISAIVLRNEKELKEPIKVAQRNS 342

Query: 62  LEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKDKELL 121
           LE++         +  +K  G   SS         V   PFP R A+ K+   ++DKE+L
Sbjct: 343 LEKEAEKEVTIPSSQPQKPDGEKPSS--------IVVHPPFPERFAKSKK--EEEDKEIL 402

Query: 122 DKFKRVEINIPLID 136
           + F++VE+NIPL+D
Sbjct: 403 ETFRKVEVNIPLLD 405

BLAST of Bhi09G001513 vs. TrEMBL
Match: tr|A0A2G9G7U9|A0A2G9G7U9_9LAMI (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26122 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 57/138 (41.30%), Postives = 85/138 (61.59%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEK-- 61
           +I  L  QV QLAT +++ E Q GKLPSQ  +NPK+N SAI LR+GKEL+ P    +K  
Sbjct: 416 SIQDLEKQVGQLATSLNRLESQ-GKLPSQTVINPKQNASAITLRNGKELKEPTNKAKKCS 475

Query: 62  --PELEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKD 121
              E E++  TSP+ +  P+            LP  N+ V + PFP R ++ K+   +++
Sbjct: 476 PEEEAEKEIATSPSQSQKPE----------GELP--NSVVVQPPFPERFSKSKK--QEEE 535

Query: 122 KELLDKFKRVEINIPLID 136
           KE+L+ F++VE+NIPL+D
Sbjct: 536 KEILETFRKVEVNIPLLD 538

BLAST of Bhi09G001513 vs. TrEMBL
Match: tr|A0A1U8QA90|A0A1U8QA90_NELNU (uncharacterized protein LOC104611813 OS=Nelumbo nucifera OX=4432 GN=LOC104611813 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQ-SGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKP 61
           +I  L  Q+ Q+AT +S+ E Q SGKLPSQ  +NP++N SAI+LRSGKE+E PA      
Sbjct: 362 SIQHLDNQMGQMATAISRLEAQSSGKLPSQTVVNPRQNASAIVLRSGKEVEIPA------ 421

Query: 62  ELEEQRTTSPNPTITPQEKKKGV-----SVSSNSLPSLNAYVPEAPFPSRLARPKELTGD 121
                      P  + QEK+K V      V  +  P L  Y P  PFP  LA  ++   +
Sbjct: 422 --------GAAPASSKQEKEKNVIPNDDDVPKHKFPPLFYYKPVPPFPQALAESRK--DE 481

Query: 122 KDKELLDKFKRVEINIPLID 136
           + K+L + F+R E+N+PL+D
Sbjct: 482 QIKDLYETFRRCEVNVPLLD 485

BLAST of Bhi09G001513 vs. NCBI nr
Match: XP_021764024.1 (uncharacterized protein LOC110728690 [Chenopodium quinoa])

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 0

Query: 6   LGTQVSQLATLMSKSERQ-SGKLPSQPELNPKENVSAIMLRSGKELETPAE----IVEKP 65
           L  QVSQLA  + K + Q S KLPSQPE NPKEN SAI LRSGK+LE PA+    + E  
Sbjct: 256 LENQVSQLANTVGKLQAQNSNKLPSQPEKNPKENASAISLRSGKQLEVPAKKTKGLAEHQ 315

Query: 66  ELEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRL-ARPKELTGDKDKE 125
           E +E        TI P++ K+   VS   L  L ++    PFPSRL ++ K+   + +KE
Sbjct: 316 EAQE--------TIVPEQDKQPTKVSDVVLLILISFSSSVPFPSRLSSKNKKKEHEMEKE 375

Query: 126 LLDKFKRVEINIPLID 136
            LD F++VE+NIPL++
Sbjct: 376 TLDIFRKVEVNIPLVE 383

BLAST of Bhi09G001513 vs. NCBI nr
Match: XP_021715728.1 (uncharacterized protein LOC110683644 [Chenopodium quinoa])

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 59/132 (44.70%), Postives = 80/132 (60.61%), Query Frame = 0

Query: 6   LGTQVSQLATLMSKSERQ-SGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPELEE 65
           L  QVSQLA  + K + Q S KLPSQPE NPKEN SAI LRSGK+LE  A+  E     +
Sbjct: 411 LENQVSQLANTVGKLQAQNSNKLPSQPERNPKENASAISLRSGKQLEVLAKKTEGLAAHQ 470

Query: 66  QRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARP-KELTGDKDKELLDK 125
           +       TI P++ K+   V     P+ + +    PFPSRL+   K+   +K+KE LD 
Sbjct: 471 EE----QETIVPEQDKQPTKVRDVVSPNTDEFTSSVPFPSRLSSTNKKREQEKEKETLDI 530

Query: 126 FKRVEINIPLID 136
           F++VE+NIPL++
Sbjct: 531 FRKVEVNIPLLE 538

BLAST of Bhi09G001513 vs. NCBI nr
Match: XP_024976272.1 (uncharacterized protein LOC112514172 [Cynara cardunculus var. scolymus])

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 62/134 (46.27%), Postives = 86/134 (64.18%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPE 61
           +I  LG Q++QLAT +S+ E Q GKLPSQ E NPK+NVSAI+LRSGKELE P  + +  E
Sbjct: 418 SIQNLGAQMTQLATSVSRLESQ-GKLPSQTETNPKQNVSAIVLRSGKELEEP-NMAKSRE 477

Query: 62  LEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKDKELL 121
           +E+++  SP P    Q+KK+  S       S  A V   PFP R     +    ++KE+L
Sbjct: 478 VEKEQEVSPKPI---QDKKQSGSTDD---VSEKAKVIPPPFPXRFQMSNK--AREEKEIL 537

Query: 122 DKFKRVEINIPLID 136
           + F++VE+NIPL+D
Sbjct: 538 ETFRKVEVNIPLLD 541

BLAST of Bhi09G001513 vs. NCBI nr
Match: XP_010279242.1 (PREDICTED: uncharacterized protein LOC104613215 [Nelumbo nucifera])

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQS-GKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKP 61
           +I  L  Q+ Q+AT +S  E QS GKLPSQ  +NPKENVSAI+LRSGKE+ETPA+     
Sbjct: 24  SIQRLDNQMGQMATTISWLEAQSLGKLPSQTVVNPKENVSAIVLRSGKEVETPAKAA--- 83

Query: 62  ELEEQRTTSPNPTITPQEKKKGV-----SVSSNSLPSLNAYVPEAPFPSRLARPKELTGD 121
                      P ++ QEK+K +      V     P+L+ Y P  PFP  LA  ++   +
Sbjct: 84  -----------PALSKQEKEKDIIPNDDEVPKCKFPTLSDYKPVPPFPHALAEFRK--DE 143

Query: 122 KDKELLDKFKRVEINIPLID 136
           + K+  + F+R EINIPL+D
Sbjct: 144 QFKDFYETFRRCEINIPLLD 147

BLAST of Bhi09G001513 vs. NCBI nr
Match: XP_019184289.1 (PREDICTED: uncharacterized protein LOC109179183 [Ipomoea nil])

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 0

Query: 2   AIDALGTQVSQLATLMSKSERQSGKLPSQPELNPKENVSAIMLRSGKELETPAEIVEKPE 61
           +I  L +Q+SQLA+ +S+ E Q GKLPSQ  +NPK+N SA +LRSGKEL+ P ++  +  
Sbjct: 100 SIQHLESQMSQLASTVSRLESQ-GKLPSQTVINPKQNASAFILRSGKELQEPTQVRNRHN 159

Query: 62  LEEQRTTSPNPTITPQEKKKGVSVSSNSLPSLNAYVPEAPFPSRLARPKELTGDKDKELL 121
            +E+     +P   PQ  +K V           A V   PFPSRLA+ K+   ++ KE+L
Sbjct: 160 RDEENEKEVHP---PQNDQKLVKEHP------GAVVIPPPFPSRLAKSKK--DEEQKEIL 219

Query: 122 DKFKRVEINIPLID 136
           D F++VE+NIPL+D
Sbjct: 220 DAFRKVEVNIPLLD 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1U8BPS3|A0A1U8BPS3_NELNU7.8e-1542.86uncharacterized protein LOC104613215 OS=Nelumbo nucifera OX=4432 GN=LOC104613215... [more]
tr|A0A2G9I3Q1|A0A2G9I3Q1_9LAMI1.7e-1442.54Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02876 P... [more]
tr|A0A2G9HVP4|A0A2G9HVP4_9LAMI1.1e-1341.04Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05712 P... [more]
tr|A0A2G9G7U9|A0A2G9G7U9_9LAMI1.5e-1341.30DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_261... [more]
tr|A0A1U8QA90|A0A1U8QA90_NELNU3.3e-1340.00uncharacterized protein LOC104611813 OS=Nelumbo nucifera OX=4432 GN=LOC104611813... [more]
Match NameE-valueIdentityDescription
XP_021764024.13.7e-1646.32uncharacterized protein LOC110728690 [Chenopodium quinoa][more]
XP_021715728.11.8e-1544.70uncharacterized protein LOC110683644 [Chenopodium quinoa][more]
XP_024976272.11.8e-1546.27uncharacterized protein LOC112514172 [Cynara cardunculus var. scolymus][more]
XP_010279242.11.2e-1442.86PREDICTED: uncharacterized protein LOC104613215 [Nelumbo nucifera][more]
XP_019184289.11.5e-1443.28PREDICTED: uncharacterized protein LOC109179183 [Ipomoea nil][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001513Bhi09M001513mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..94

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None