Bhi09G001312 (gene) Wax gourd

Overview
NameBhi09G001312
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 42216515 .. 42216880 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTCCTCCATTTTGAGAAGTTACCAGTAATATTTGGAAAAGATTGGGCTACTGGAGTAGGTGTGGAGACACCTACTAGCATGACATTCGATCTAAACGAGACAGATCAAAACAAGCAATTCCAATTTGATGAGTTTGAAATTCCAAATCCAATAGTAAGTGAAAATATATTAGGGGAAGAGGCACCAACAACACCTATGAGTAGGACCAATGGAGTAGGATCATCCTCTAGAGGGACCAAGAGGAAGCAATCTAGTTCAACAAATTCTGTTAATATGGTGAAGTTTATGAGTATGCAAACCACTGAGCTTCGGAGAATTGCTTCCTGGCATAAGGATGAGAAAGAGGTGGAGGTCCTTCGATGA

mRNA sequence

GTTTTCCTCCATTTTGAGAAGTTACCAGTAATATTTGGAAAAGATTGGGCTACTGGAGTAGGTGTGGAGACACCTACTAGCATGACATTCGATCTAAACGAGACAGATCAAAACAAGCAATTCCAATTTGATGAGTTTGAAATTCCAAATCCAATAGTAAGTGAAAATATATTAGGGGAAGAGGCACCAACAACACCTATGAGTAGGACCAATGGAGTAGGATCATCCTCTAGAGGGACCAAGAGGAAGCAATCTAGTTCAACAAATTCTGTTAATATGGTGAAGTTTATGAGTATGCAAACCACTGAGCTTCGGAGAATTGCTTCCTGGCATAAGGATGAGAAAGAGGTGGAGGTCCTTCGATGA

Coding sequence (CDS)

GTTTTCCTCCATTTTGAGAAGTTACCAGTAATATTTGGAAAAGATTGGGCTACTGGAGTAGGTGTGGAGACACCTACTAGCATGACATTCGATCTAAACGAGACAGATCAAAACAAGCAATTCCAATTTGATGAGTTTGAAATTCCAAATCCAATAGTAAGTGAAAATATATTAGGGGAAGAGGCACCAACAACACCTATGAGTAGGACCAATGGAGTAGGATCATCCTCTAGAGGGACCAAGAGGAAGCAATCTAGTTCAACAAATTCTGTTAATATGGTGAAGTTTATGAGTATGCAAACCACTGAGCTTCGGAGAATTGCTTCCTGGCATAAGGATGAGAAAGAGGTGGAGGTCCTTCGATGA

Protein sequence

VFLHFEKLPVIFGKDWATGVGVETPTSMTFDLNETDQNKQFQFDEFEIPNPIVSENILGEEAPTTPMSRTNGVGSSSRGTKRKQSSSTNSVNMVKFMSMQTTELRRIASWHKDEKEVEVLR
Homology
[Close]
BLAST of Bhi09G001312 vs. TrEMBL
Match: tr|A0A1S3CC17|A0A1S3CC17_CUCME (uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.1e-07
Identity = 38/119 (31.93%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 2   FLHFEKLPVIFGKDWATGVGVETPTSMTFDL--NETDQNKQFQFDEFEIPNPIVSENILG 61
           F +F  L ++FG+D ATG   +TP  M   +  +  + +     ++F+IPNP   E   G
Sbjct: 42  FPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSG 101

Query: 62  EEAPTTPMSRTNGVGSSSRGTKRKQSSSTNSVNMVKFMSMQTTELRRIASWHKDEKEVE 119
           E+  +TP S  + VGSS    KR+  S          M   + E+R+IA+W +++ E+E
Sbjct: 102 EDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIE 160

[Close]
BLAST of Bhi09G001312 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 66.6 bits (161), Expect = 6.5e-08
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 0 

Query: 4   HFEKLPVIFGKDWATGVGVETPTSMTFDLNET-DQNKQFQFDEFEIPNPIV---SENILG 63
           H++ L V FGKD ATG  ++ P  M      T  ++  F+  +F IP+P +   +E+ + 
Sbjct: 40  HYDDLTVAFGKDRATGANLDCPVDMASSAAATIAEDAHFEAQDFYIPDPPMFNTTEDAIE 99

Query: 64  EEAPTTPMSRTNGVGSSSRGTKRKQSSSTNS-VNMVKF-MSMQTTELRRIASWHKDEKEV 122
           E+ P TP S+   +G+SS G+KRK+S  T+  V++V+  M MQT  L ++A+W   ++E 
Sbjct: 100 EDLPNTPTSKPT-IGTSSGGSKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEK 159

[Close]
BLAST of Bhi09G001312 vs. NCBI nr
Match: XP_008460440.1 (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 38/119 (31.93%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 2   FLHFEKLPVIFGKDWATGVGVETPTSMTFDL--NETDQNKQFQFDEFEIPNPIVSENILG 61
           F +F  L ++FG+D ATG   +TP  M   +  +  + +     ++F+IPNP   E   G
Sbjct: 42  FPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSG 101

Query: 62  EEAPTTPMSRTNGVGSSSRGTKRKQSSSTNSVNMVKFMSMQTTELRRIASWHKDEKEVE 119
           E+  +TP S  + VGSS    KR+  S          M   + E+R+IA+W +++ E+E
Sbjct: 102 EDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIE 160

The following BLAST results are available for this feature:
BLAST of Bhi09G001312 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09G001312 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09G001312 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CC17|A0A1S3CC17_CUCME8.1e-0731.93uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=... [more]
BLAST of Bhi09G001312 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158565.16.5e-0835.48uncharacterized protein LOC111025018 [Momordica charantia][more]
XP_008460440.11.2e-0631.93PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001312Bhi09M001312mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..94