Bhi09G001303 (gene) Wax gourd

NameBhi09G001303
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 41941777 .. 41941960 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAACCGTTGTTGCAGCAGCAGCAACAACAGCAACAACAACAGATGGTTCCATTACAAGATGCTTACATGTAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAATCCACCATTCCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATGCTATCAG

mRNA sequence

ATGGTCAACCGTTGTTGCAGCAGCAGCAACAACAGCAACAACAACAGATGGTTCCATTACAAGATGCTTACATGTAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAATCCACCATTCCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATGCTATCAG

Coding sequence (CDS)

ATGGTCAACCGTTGTTGCAGCAGCAGCAACAACAGCAACAACAACAGATGGTTCCATTACAAGATGCTTACATGTAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAATCCACCATTCCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATGCTATCAG

Protein sequence

MVNRCCSSSNNSNNNRWFHYKMLTCRAELKLFKMLNPPFHELSNIFNQLATLVSEQGEMLS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE
IPR000727T_SNARE_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001303Bhi09M001303mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 41..61
score: 8.551
IPR010989SNARESUPERFAMILYSSF47661t-snare proteinscoord: 40..60

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None