Bhi09G001248 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACCCATACTAGATATGTAAGATATGGCTATGGTTATCTTTATTGCACTAGTTGAGGCTACTACCACTTTTAAGTGCTCGGTTTTATTTTTCTCTTTAAGAATTACAGTTGAATTTATTCATGCTCTTTTAGGCGACATATTTGGCGTCCGTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAGTTGCTCTCTAGTGAGAAGGCTGGGCTTGAAGAATTAAATAGACTTGTGTACCTTGCCAAAAGATATAGCTCATGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGTAAGTTGGAAATTTTTCATTCTAGACAATTTTTTCTACCTTCTAATCATTATTTCATCTCCAACCTTGGTTGTTGGAATCATGTAGTATTCCCTTAACCGTGTTAATTATAGGCCAGAGGTCAGCAAAAGATTCTCTTCTGAAGAGTTTCAAACAGATAAGGTTGAAAATGTTGTAGATAATTTGCGTCACCCAGATAAGGGAGTTCGTATATCTACTCTCAGAATATTGTGCCACTATGAGCCTTTGCGGTCTGCCTCCCTTACAAAGAACCCTTCAATTGATCACAAGATGGAAACTGAAAATTTGGAACAATATTCTGATGATTCAATAGGCGGTGAG ATGCATACCCATACTAGATATGTAAGATATGGCTATGGCGACATATTTGGCGTCCGTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAGTTGCTCTCTAGTGAGAAGGCTGGGCTTGAAGAATTAAATAGACTTGTGTACCTTGCCAAAAGATATAGCTCATGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGCCAGAGGTCAGCAAAAGATTCTCTTCTGAAGAGTTTCAAACAGATAAGGTTGAAAATGTTGTAGATAATTTGCGTCACCCAGATAAGGGAGTTCGTATATCTACTCTCAGAATATTGTGCCACTATGAGCCTTTGCGGTCTGCCTCCCTTACAAAGAACCCTTCAATTGATCACAAGATGGAAACTGAAAATTTGGAACAATATTCTGATGATTCAATAGGCGGTGAG ATGCATACCCATACTAGATATGTAAGATATGGCTATGGCGACATATTTGGCGTCCGTAAAGAAAATTTGGAAAGCATAATTGGTGCCACCATAGGTTCTTACCTTAAGTTGCTCTCTAGTGAGAAGGCTGGGCTTGAAGAATTAAATAGACTTGTGTACCTTGCCAAAAGATATAGCTCATGTTCACAAGTCTTGGTAGCTGTAGCTGATTATTTGGATTTTATTTATGGGCCAGAGGTCAGCAAAAGATTCTCTTCTGAAGAGTTTCAAACAGATAAGGTTGAAAATGTTGTAGATAATTTGCGTCACCCAGATAAGGGAGTTCGTATATCTACTCTCAGAATATTGTGCCACTATGAGCCTTTGCGGTCTGCCTCCCTTACAAAGAACCCTTCAATTGATCACAAGATGGAAACTGAAAATTTGGAACAATATTCTGATGATTCAATAGGCGGTGAG MHTHTRYVRYGYGDIFGVRKENLESIIGATIGSYLKLLSSEKAGLEELNRLVYLAKRYSSCSQVLVAVADYLDFIYGPEVSKRFSSEEFQTDKVENVVDNLRHPDKGVRISTLRILCHYEPLRSASLTKNPSIDHKMETENLEQYSDDSIGGE
BLAST of Bhi09G001248 vs. TAIR10
Match: AT4G30990.2 (ARM repeat superfamily protein) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-14 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Bhi09G001248 vs. TrEMBL
Match: tr|A0A0A0LIC2|A0A0A0LIC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G148430 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 3.5e-55 Identity = 117/149 (78.52%), Postives = 128/149 (85.91%), Query Frame = 0
BLAST of Bhi09G001248 vs. TrEMBL
Match: tr|A0A1S3C531|A0A1S3C531_CUCME (U3 small nucleolar RNA-associated protein 20 OS=Cucumis melo OX=3656 GN=LOC103496945 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 2.1e-52 Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0
BLAST of Bhi09G001248 vs. TrEMBL
Match: tr|A0A2I4HWH3|A0A2I4HWH3_9ROSI (small subunit processome component 20 homolog isoform X1 OS=Juglans regia OX=51240 GN=LOC109022127 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of Bhi09G001248 vs. TrEMBL
Match: tr|A0A2I4HWK0|A0A2I4HWK0_9ROSI (small subunit processome component 20 homolog isoform X3 OS=Juglans regia OX=51240 GN=LOC109022127 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of Bhi09G001248 vs. TrEMBL
Match: tr|A0A2I4HWH7|A0A2I4HWH7_9ROSI (small subunit processome component 20 homolog isoform X2 OS=Juglans regia OX=51240 GN=LOC109022127 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of Bhi09G001248 vs. NCBI nr
Match: XP_011649103.1 (PREDICTED: small subunit processome component 20 homolog [Cucumis sativus] >KGN61498.1 hypothetical protein Csa_2G148430 [Cucumis sativus]) HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55 Identity = 117/149 (78.52%), Postives = 128/149 (85.91%), Query Frame = 0
BLAST of Bhi09G001248 vs. NCBI nr
Match: XP_023513964.1 (small subunit processome component 20 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.7 bits (561), Expect = 3.4e-54 Identity = 117/149 (78.52%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Bhi09G001248 vs. NCBI nr
Match: XP_008457216.1 (PREDICTED: U3 small nucleolar RNA-associated protein 20 [Cucumis melo]) HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52 Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0
BLAST of Bhi09G001248 vs. NCBI nr
Match: XP_022999923.1 (small subunit processome component 20 homolog [Cucurbita maxima]) HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51 Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0
BLAST of Bhi09G001248 vs. NCBI nr
Match: XP_022964369.1 (small subunit processome component 20 homolog [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51 Identity = 112/149 (75.17%), Postives = 124/149 (83.22%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |