Bhi09G000797 (gene) Wax gourd

Overview
NameBhi09G000797
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptiontranscription initiation factor TFIID subunit 13
Locationchr9 : 21808126 .. 21810552 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGGTAAATTTTGGTTTTTTTTCGAAAAAAGAATAATAACAAAAATGAAAACCGAACTAAACCACTCTCATCGTCCTTTCTTTCTAATCCGACCCCACTGCGGAAGAATACTGTAATTTCCGGCGATCTCCTGCGGTGGCTCCGATTTTCCATCTCCGGTGAGAATCATGGCTAATTCTTAGCAGTTTTTAAATACGTCCTTTCTTTTATCTTCTTTGGCGTGTATTTTATTCATAGATTAATTAATTGGACTCGATTAGCTTAAATTTACTTCACTTTTCTAAGGCTCCACTTTGAAATTTCCCCTTTCTGTTTCAATGCTTGTTTGATATTGTAACTTTTCATTAGGGTTTATATTCCTTCCATCGGGTTCGTGATAGGGTTCCTTTTTGGGAATGTTTCAATTTAGTGGGTCGATGATTATAGATAGTTGATTATTTTACCTTCACGGTTAGATTATTTTCGTATTGATTATTGTGGGAAGATAGTGAAGATGAACAATCCATCTGCTGCGTCGTCCTCAAAGCAAAGAACTGGGTCGTCTCAGCCCTCTGAAATCTCTTTTAAGCGCAAAAGAGGGGTTTTTCAGAAAGAATGTAACTGATTTCCCTTTTCTTCCTTTTTTCTTCTTCATCCCAAGTTTGTATGTGAAAATGTAATTATGTGATCCTCTCTCTTTCCAGTGCAGCACATGATGTATGGTTTTGGTGATGACCCTAATGTAAGTGAAATTATCATATATTACTTTTGTTTGTATTTATATGGAAAGGATGCTTATGTATGTTTCCATGGAAATTCAGACATGAAATTTTGTTTTTTATACTTTTCTGGTTTTTTCTGTCATCTTTCATGGCTTTATATATTTTGTTGAAATCTTCTGTAGAGCTTAGAAAGTGAGTAAAGAAATTTTGATTGTTTAGCTCTTTTTGGGAGTCTAGGAAAGGTGGGTGGGGATTCCTTGAAGATATTTGCAATGATCAGTGCAAAGATATTTGATCTAACTCATCATAGGAACAGACATCTCCATGATTTCTGATATTTTAATTTTTTTTGCAAGTTGCTACCCCATCCCCTCAGTAAAATGCATACCTGCCTGAAGAAAATTGGAAAGAACTAATCAATATTCCTTGTATTTTCTAAAATTGAGCTCAAGCTTCCTATCCCGTGGATGACAAAGAATAGAATTACGGTTTTGAAATCCTGAAGCTCTGTATAATGGTTAGGTTTTATGCGTCTTATCGTTAATTAAGAGCCATGATAAGAATTTTATTGGTTGCCTCTCTCTTTAGTCATAAGTTATTAGCAGATCAGAAGTACAATGAGAGCAAGGAAAAAATTCCAGTCTGTGTGTTGTTGTCTTCATTTATGAATAAAAATACCTTTTCATGAGTTTCTATTGGCTGCATTACAGCCCCTTCCAGAATCTGTAGCACTTATGGAAGAGATAGTTGTGGAGTACATCACTGAACTGGTAAGAATTTCTGTGCAATTGTTAAGTCTCCCTTACTAAACCAATGATGTATAGTTAGGATTATTTGAAATAGATATTCTTTTCAGGTGTATAAAGCCCAGGAAATTGGATCCAAGAGGGGAAAACTATCTGTGGAAGACTTTTTGTATTTAATGCGCAAGGTACATTACTACATTACATAGTTTCTTTCTGTATGTTCTCATATCAATGAATGAACTTAAGTTCTCTCGTTATTTGGCTGTGCGATGTGGCATCCTTTATCTTAAGAAATCGACATATTAAAATTTTCATCCCGGCATTTTGTAAGCATACATTTCTTGTGTACCAGTGCTTTTGTTATAGATCTTCATTCCAAGTGTGATTTCTGGGGTTTGCTGATTACATAAACAGATTAGCTCCATTGTTTTGATCTAAAATTAGGTGTCTCAAGCGCCCTCGGCTGCAATTGTTTAACTAACATTAGATATTAAAACTTCTTAACCTATATGATTTTCTACAATTTAGGATCCACGCAAATTGAACCGCTCTACCGAACTGTTGTCGATGTACGAAGAGCTGAAACAGGCAAGGAGAGCTTTCGAGATAGATGAAGATAAGCTGAAAAAAGCTTTTGAAGAGGAAGACAAGATGGATTAGTAATCATAGGAAGATATTTTGGAGGTCAATTGTAATTGTTGCTGCACAAACAAAGTTCGTCTCATTATGGGATCTTGTCATATTGAAAGTCAACCGACAGGTCTTAACTCTCTGTCTTTGTCAACCTTTTTAGACAGGACAAAGCAAAGCAATTAGCTTTAGCAAGGATTATTTTGTTCTATCTGCTTAATGGCAATTGATGTATATTAATCCCCTTCCTCTTAGCCTTGACCTACGTATAAAGGTGGGGGCTTCCCTATTGTACACACACTCCTTTTGGAATTAATGAAATTAACCTCTTTTTGAAGTTTCTAGCAA

mRNA sequence

TTAGGGTAAATTTTGGTTTTTTTTCGAAAAAAGAATAATAACAAAAATGAAAACCGAACTAAACCACTCTCATCGTCCTTTCTTTCTAATCCGACCCCACTGCGGAAGAATACTGTAATTTCCGGCGATCTCCTGCGGTGGCTCCGATTTTCCATCTCCGATTATTTTCGTATTGATTATTGTGGGAAGATAGTGAAGATGAACAATCCATCTGCTGCGTCGTCCTCAAAGCAAAGAACTGGGTCGTCTCAGCCCTCTGAAATCTCTTTTAAGCGCAAAAGAGGGGTTTTTCAGAAAGAATTGCAGCACATGATGTATGGTTTTGGTGATGACCCTAATCCCCTTCCAGAATCTGTAGCACTTATGGAAGAGATAGTTGTGGAGTACATCACTGAACTGGTGTATAAAGCCCAGGAAATTGGATCCAAGAGGGGAAAACTATCTGTGGAAGACTTTTTGTATTTAATGCGCAAGGATCCACGCAAATTGAACCGCTCTACCGAACTGTTGTCGATGTACGAAGAGCTGAAACAGGCAAGGAGAGCTTTCGAGATAGATGAAGATAAGCTGAAAAAAGCTTTTGAAGAGGAAGACAAGATGGATTAGTAATCATAGGAAGATATTTTGGAGGTCAATTGTAATTGTTGCTGCACAAACAAAGTTCGTCTCATTATGGGATCTTGTCATATTGAAAGTCAACCGACAGGTCTTAACTCTCTGTCTTTGTCAACCTTTTTAGACAGGACAAAGCAAAGCAATTAGCTTTAGCAAGGATTATTTTGTTCTATCTGCTTAATGGCAATTGATGTATATTAATCCCCTTCCTCTTAGCCTTGACCTACGTATAAAGGTGGGGGCTTCCCTATTGTACACACACTCCTTTTGGAATTAATGAAATTAACCTCTTTTTGAAGTTTCTAGCAA

Coding sequence (CDS)

ATGAACAATCCATCTGCTGCGTCGTCCTCAAAGCAAAGAACTGGGTCGTCTCAGCCCTCTGAAATCTCTTTTAAGCGCAAAAGAGGGGTTTTTCAGAAAGAATTGCAGCACATGATGTATGGTTTTGGTGATGACCCTAATCCCCTTCCAGAATCTGTAGCACTTATGGAAGAGATAGTTGTGGAGTACATCACTGAACTGGTGTATAAAGCCCAGGAAATTGGATCCAAGAGGGGAAAACTATCTGTGGAAGACTTTTTGTATTTAATGCGCAAGGATCCACGCAAATTGAACCGCTCTACCGAACTGTTGTCGATGTACGAAGAGCTGAAACAGGCAAGGAGAGCTTTCGAGATAGATGAAGATAAGCTGAAAAAAGCTTTTGAAGAGGAAGACAAGATGGATTAG

Protein sequence

MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEIDEDKLKKAFEEEDKMD
Homology
[Close]
BLAST of Bhi09G000797 vs. Swiss-Prot
Match: sp|Q6NQH4|TAF13_ARATH (Transcription initiation factor TFIID subunit 13 OS=Arabidopsis thaliana OX=3702 GN=TAF13 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-34
Identity = 71/99 (71.72%), Postives = 89/99 (89.90%), Query Frame = 0 

Query: 26  RKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVED 85
           +++ +FQKELQHMMYGFGD+ NPLPESVAL+E+IVVEY+T+L +KAQEIGSKRG+L V+D
Sbjct: 26  KRKTLFQKELQHMMYGFGDEQNPLPESVALVEDIVVEYVTDLTHKAQEIGSKRGRLLVDD 85

Query: 86  FLYLMRKDPRKLNRSTELLSMYEELKQARRAFEIDEDKL 125
           FLYL+RKD  KLNR  ELL+M EELKQAR+AF++DE +L
Sbjct: 86  FLYLIRKDLPKLNRCRELLAMQEELKQARKAFDVDEKEL 124

[Close]
BLAST of Bhi09G000797 vs. Swiss-Prot
Match: sp|Q148M7|TAF13_BOVIN (Transcription initiation factor TFIID subunit 13 OS=Bos taurus OX=9913 GN=TAF13 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 54/94 (57.45%), Postives = 76/94 (80.85%), Query Frame = 0 

Query: 25  KRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVE 84
           KRKR +F KEL+ MMYGFGDD NP  ESV ++E++V+E+ITE+ +KA  IG ++G++ VE
Sbjct: 27  KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVE 86

Query: 85  DFLYLMRKDPRKLNRSTELLSMYEELKQARRAFE 119
           D ++L+RKDPRK  R  +LL+M EELK+AR+AF+
Sbjct: 87  DIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118

[Close]
BLAST of Bhi09G000797 vs. Swiss-Prot
Match: sp|Q54CN8|TAF13_DICDI (Transcription initiation factor TFIID subunit 13 OS=Dictyostelium discoideum OX=44689 GN=taf13 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 54/97 (55.67%), Postives = 73/97 (75.26%), Query Frame = 0 

Query: 22  ISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKL 81
           +S KRKR +F KEL+HMMYGFGD   PL ES+ L+EE+V E+I E+  KA ++ +KRGK 
Sbjct: 1   MSTKRKR-MFSKELKHMMYGFGDVREPLHESIDLLEELVFEFIQEMTLKAAQVSNKRGKF 60

Query: 82  SVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFE 119
             ED ++L+RKDP+K  R  ELL M EELK+A++AF+
Sbjct: 61  QTEDLVFLVRKDPKKYYRVIELLRMNEELKKAKKAFD 96

[Close]
BLAST of Bhi09G000797 vs. Swiss-Prot
Match: sp|Q15543|TAF13_HUMAN (Transcription initiation factor TFIID subunit 13 OS=Homo sapiens OX=9606 GN=TAF13 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 54/94 (57.45%), Postives = 76/94 (80.85%), Query Frame = 0 

Query: 25  KRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVE 84
           KRKR +F KEL+ MMYGFGDD NP  ESV ++E++V+E+ITE+ +KA  IG ++G++ VE
Sbjct: 27  KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVE 86

Query: 85  DFLYLMRKDPRKLNRSTELLSMYEELKQARRAFE 119
           D ++L+RKDPRK  R  +LL+M EELK+AR+AF+
Sbjct: 87  DIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118

[Close]
BLAST of Bhi09G000797 vs. Swiss-Prot
Match: sp|P61216|TAF13_MOUSE (Transcription initiation factor TFIID subunit 13 OS=Mus musculus OX=10090 GN=Taf13 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 54/94 (57.45%), Postives = 76/94 (80.85%), Query Frame = 0 

Query: 25  KRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVE 84
           KRKR +F KEL+ MMYGFGDD NP  ESV ++E++V+E+ITE+ +KA  IG ++G++ VE
Sbjct: 27  KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVE 86

Query: 85  DFLYLMRKDPRKLNRSTELLSMYEELKQARRAFE 119
           D ++L+RKDPRK  R  +LL+M EELK+AR+AF+
Sbjct: 87  DIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118

[Close]
BLAST of Bhi09G000797 vs. TAIR10
Match: AT1G02680.1 (TBP-associated factor 13)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-35
Identity = 71/99 (71.72%), Postives = 89/99 (89.90%), Query Frame = 0 

Query: 26  RKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIVVEYITELVYKAQEIGSKRGKLSVED 85
           +++ +FQKELQHMMYGFGD+ NPLPESVAL+E+IVVEY+T+L +KAQEIGSKRG+L V+D
Sbjct: 26  KRKTLFQKELQHMMYGFGDEQNPLPESVALVEDIVVEYVTDLTHKAQEIGSKRGRLLVDD 85

Query: 86  FLYLMRKDPRKLNRSTELLSMYEELKQARRAFEIDEDKL 125
           FLYL+RKD  KLNR  ELL+M EELKQAR+AF++DE +L
Sbjct: 86  FLYLIRKDLPKLNRCRELLAMQEELKQARKAFDVDEKEL 124

[Close]
BLAST of Bhi09G000797 vs. TrEMBL
Match: tr|A0A1S3BRL0|A0A1S3BRL0_CUCME (transcription initiation factor TFIID subunit 13 OS=Cucumis melo OX=3656 GN=LOC103492769 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.5e-62
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNN SA SSSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MNNSSAGSSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEEEDKMD
Sbjct: 121 EDKLKKAFEEEDKMD 135

[Close]
BLAST of Bhi09G000797 vs. TrEMBL
Match: tr|A0A0A0KB69|A0A0A0KB69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407540 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-61
Identity = 129/135 (95.56%), Postives = 130/135 (96.30%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNN SA  SSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MNNSSAGPSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEEEDKMD
Sbjct: 121 EDKLKKAFEEEDKMD 135

[Close]
BLAST of Bhi09G000797 vs. TrEMBL
Match: tr|A0A0B2PQV7|A0A0B2PQV7_GLYSO (Transcription initiation factor TFIID subunit 13 OS=Glycine soja OX=3848 GN=glysoja_034326 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.6e-49
Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           M+N SA +SSK RT SSQPSE S KRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MSNSSAGTSSKPRTASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEY+TELV+KAQ+IGS+RGKLSVEDFLYL+RKD  KLNR TELLSM EELKQAR+ FE D
Sbjct: 61  VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDSPKLNRCTELLSMNEELKQARKVFESD 120

Query: 121 EDKLKKAFEEEDKMD 136
           E+KL+K FE +D ++
Sbjct: 121 EEKLRKVFEVDDSLE 135

[Close]
BLAST of Bhi09G000797 vs. TrEMBL
Match: tr|I1L7R2|I1L7R2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789657 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.3e-49
Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           M+N SA +SSK RT SSQPSE S KRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MSNSSAGTSSKPRTASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEY+TELV+KAQ+IGS+RGKLSVEDFLYL+RKD  KLNR TELLSM EELKQAR+ FE D
Sbjct: 61  VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDSPKLNRCTELLSMNEELKQARKVFESD 120

Query: 121 EDKLKKAFEEEDKMD 136
           E+KL+K FE +D ++
Sbjct: 121 EEKLRKVFEVDDSVE 135

[Close]
BLAST of Bhi09G000797 vs. TrEMBL
Match: tr|A0A0B2PL30|A0A0B2PL30_GLYSO (Transcription initiation factor TFIID subunit 13 OS=Glycine soja OX=3848 GN=glysoja_034338 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.3e-49
Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           M+N SA +SSK RT SSQPSE S KRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MSNSSAGTSSKPRTASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEY+TELV+KAQ+IGS+RGKLSVEDFLYL+RKD  KLNR TELLSM EELKQAR+ FE D
Sbjct: 61  VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDSPKLNRCTELLSMNEELKQARKVFESD 120

Query: 121 EDKLKKAFEEEDKMD 136
           E+KL+K FE +D ++
Sbjct: 121 EEKLRKVFEVDDSVE 135

[Close]
BLAST of Bhi09G000797 vs. NCBI nr
Match: XP_008451497.1 (PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451498.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451499.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451500.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451501.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451502.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_008451503.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_016901114.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_016901115.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_016901116.1 PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNN SA SSSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MNNSSAGSSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEEEDKMD
Sbjct: 121 EDKLKKAFEEEDKMD 135

[Close]
BLAST of Bhi09G000797 vs. NCBI nr
Match: XP_022144527.1 (transcription initiation factor TFIID subunit 13 [Momordica charantia] >XP_022144536.1 transcription initiation factor TFIID subunit 13 [Momordica charantia])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 129/135 (95.56%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNNPSA  SSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MNNPSAGPSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEEEDK+D
Sbjct: 121 EDKLKKAFEEEDKLD 135

[Close]
BLAST of Bhi09G000797 vs. NCBI nr
Match: XP_004136002.1 (PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis sativus] >KGN45001.1 hypothetical protein Csa_7G407540 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 4.3e-61
Identity = 129/135 (95.56%), Postives = 130/135 (96.30%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNN SA  SSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDDPNPLPESVALME+IV
Sbjct: 1   MNNSSAGPSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEEEDKMD
Sbjct: 121 EDKLKKAFEEEDKMD 135

[Close]
BLAST of Bhi09G000797 vs. NCBI nr
Match: XP_022991537.1 (transcription initiation factor TFIID subunit 13 [Cucurbita maxima] >XP_022991538.1 transcription initiation factor TFIID subunit 13 [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNNPSA SSSKQRTGSSQPSE SFKRKRGVFQKELQHMMYGFGDD NPLPESVALME+IV
Sbjct: 1   MNNPSAGSSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDANPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEE++K+D
Sbjct: 121 EDKLKKAFEEDEKVD 135

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BLAST of Bhi09G000797 vs. NCBI nr
Match: XP_023547584.1 (transcription initiation factor TFIID subunit 13 [Cucurbita pepo subsp. pepo] >XP_023547585.1 transcription initiation factor TFIID subunit 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 4.8e-60
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MNNPSAASSSKQRTGSSQPSEISFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEEIV 60
           MNNPSA SSSKQRTG+SQPSE SFKRKRGVFQKELQHMMYGFGDD NPLPESVALME+IV
Sbjct: 1   MNNPSAGSSSKQRTGASQPSETSFKRKRGVFQKELQHMMYGFGDDANPLPESVALMEDIV 60

Query: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMYEELKQARRAFEID 120
           VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSM EELKQARRAFEID
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 121 EDKLKKAFEEEDKMD 136
           EDKLKKAFEE++K+D
Sbjct: 121 EDKLKKAFEEDEKVD 135

The following BLAST results are available for this feature:
BLAST of Bhi09G000797 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6NQH4|TAF13_ARATH1.8e-3471.72Transcription initiation factor TFIID subunit 13 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q148M7|TAF13_BOVIN1.2e-2257.45Transcription initiation factor TFIID subunit 13 OS=Bos taurus OX=9913 GN=TAF13 ... [more]
sp|Q54CN8|TAF13_DICDI1.2e-2255.67Transcription initiation factor TFIID subunit 13 OS=Dictyostelium discoideum OX=... [more]
sp|Q15543|TAF13_HUMAN1.2e-2257.45Transcription initiation factor TFIID subunit 13 OS=Homo sapiens OX=9606 GN=TAF1... [more]
sp|P61216|TAF13_MOUSE1.2e-2257.45Transcription initiation factor TFIID subunit 13 OS=Mus musculus OX=10090 GN=Taf... [more]
BLAST of Bhi09G000797 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02680.11.0e-3571.72TBP-associated factor 13[more]
BLAST of Bhi09G000797 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BRL0|A0A1S3BRL0_CUCME7.5e-6296.30transcription initiation factor TFIID subunit 13 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0KB69|A0A0A0KB69_CUCSA2.9e-6195.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407540 PE=4 SV=1[more]
tr|A0A0B2PQV7|A0A0B2PQV7_GLYSO5.6e-4978.52Transcription initiation factor TFIID subunit 13 OS=Glycine soja OX=3848 GN=glys... [more]
tr|I1L7R2|I1L7R2_SOYBN7.3e-4978.52Uncharacterized protein OS=Glycine max OX=3847 GN=100789657 PE=4 SV=1[more]
tr|A0A0B2PL30|A0A0B2PL30_GLYSO7.3e-4978.52Transcription initiation factor TFIID subunit 13 OS=Glycine soja OX=3848 GN=glys... [more]
BLAST of Bhi09G000797 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008451497.11.1e-6196.30PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis melo] >XP_0... [more]
XP_022144527.11.1e-6195.56transcription initiation factor TFIID subunit 13 [Momordica charantia] >XP_02214... [more]
XP_004136002.14.3e-6195.56PREDICTED: transcription initiation factor TFIID subunit 13 [Cucumis sativus] >K... [more]
XP_022991537.12.2e-6094.07transcription initiation factor TFIID subunit 13 [Cucurbita maxima] >XP_02299153... [more]
XP_023547584.14.8e-6093.33transcription initiation factor TFIID subunit 13 [Cucurbita pepo subsp. pepo] >X... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR003195TFIID_TAF13
IPR009072Histone-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
biological_process GO:0006413 translational initiation
biological_process GO:0006366 transcription from RNA polymerase II promoter
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003712 transcription cofactor activity
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000797Bhi09M000797mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR11380:SF5TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOGcoord: 9..129
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 30..74
e-value: 1.3E-24
score: 87.4
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 31..73
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 30..118
e-value: 2.6E-30
score: 104.2
IPR003195Transcription initiation factor IID, subunit 13PANTHERPTHR11380TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDcoord: 9..129
IPR003195Transcription initiation factor IID, subunit 13CDDcd07978TAF13coord: 28..118
e-value: 6.72608E-39
score: 127.647

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G000797Cucumber (Gy14) v1cgywgoB432
Bhi09G000797Cucumber (Gy14) v2cgybwgoB660
Bhi09G000797Cucurbita maxima (Rimu)cmawgoB0494
Bhi09G000797Cucurbita maxima (Rimu)cmawgoB1119
Bhi09G000797Cucurbita moschata (Rifu)cmowgoB0493
Bhi09G000797Cucurbita moschata (Rifu)cmowgoB1118
Bhi09G000797Cucurbita pepo (Zucchini)cpewgoB0210
Bhi09G000797Cucurbita pepo (Zucchini)cpewgoB0420
Bhi09G000797Wild cucumber (PI 183967)cpiwgoB703
Bhi09G000797Cucumber (Chinese Long) v3cucwgoB716
Bhi09G000797Cucumber (Chinese Long) v2cuwgoB691
Bhi09G000797Bottle gourd (USVL1VR-Ls)lsiwgoB271
Bhi09G000797Melon (DHL92) v3.6.1medwgoB255
Bhi09G000797Melon (DHL92) v3.5.1mewgoB254
Bhi09G000797Watermelon (Charleston Gray)wcgwgoB069
Bhi09G000797Watermelon (97103) v2wgowmbB615
Bhi09G000797Watermelon (97103) v1wgowmB586
Bhi09G000797Silver-seed gourdcarwgoB0133
Bhi09G000797Silver-seed gourdcarwgoB0545