Bhi09G000776 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000776
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr9 : 21185454 .. 21185930 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAAGCAGCCTTCATTCAACATTAATAATATTAATGTTAATGGAGGAAGCAACATTTATTCAAATATGATAAATGTTTGTGAAATCCAAGAAAACCCTAATTGGACACTACCAATAAGGCAATCATCAATGGCAGCAACTAATGATCTTGCTTTTAGTATTAATCTTTATCCTCCTCCAACTTCAGCCAATCAAATCTCTAATATTGATGGTAATGGTGTTGGTATTGGGCTTCATCCTATCATGAATTATAACTCTGTTGGACGTTTGAATAATTATACTAATGATTACTTTCTTGGCACCCTCCCAAACTTTGGTTTTGGAGATTATAACATGAATTTGAATTTTGATCATGTACAAGTTGATCATGGGCATGGTCTCAACAATGATATGTATTGTCTTGGAAGAAGCTATTCTCAGACTTTTGATTTTGGATATCCTTCCAACTTCAATCCCATCAATGATTTTCAG

mRNA sequence

ATGGAGCAGAAGCAGCCTTCATTCAACATTAATAATATTAATGTTAATGGAGGAAGCAACATTTATTCAAATATGATAAATGTTTGTGAAATCCAAGAAAACCCTAATTGGACACTACCAATAAGGCAATCATCAATGGCAGCAACTAATGATCTTGCTTTTAGTATTAATCTTTATCCTCCTCCAACTTCAGCCAATCAAATCTCTAATATTGATGGTAATGGTGTTGGTATTGGGCTTCATCCTATCATGAATTATAACTCTGTTGGACGTTTGAATAATTATACTAATGATTACTTTCTTGGCACCCTCCCAAACTTTGGTTTTGGAGATTATAACATGAATTTGAATTTTGATCATGTACAAGTTGATCATGGGCATGGTCTCAACAATGATATGTATTGTCTTGGAAGAAGCTATTCTCAGACTTTTGATTTTGGATATCCTTCCAACTTCAATCCCATCAATGATTTTCAG

Coding sequence (CDS)

ATGGAGCAGAAGCAGCCTTCATTCAACATTAATAATATTAATGTTAATGGAGGAAGCAACATTTATTCAAATATGATAAATGTTTGTGAAATCCAAGAAAACCCTAATTGGACACTACCAATAAGGCAATCATCAATGGCAGCAACTAATGATCTTGCTTTTAGTATTAATCTTTATCCTCCTCCAACTTCAGCCAATCAAATCTCTAATATTGATGGTAATGGTGTTGGTATTGGGCTTCATCCTATCATGAATTATAACTCTGTTGGACGTTTGAATAATTATACTAATGATTACTTTCTTGGCACCCTCCCAAACTTTGGTTTTGGAGATTATAACATGAATTTGAATTTTGATCATGTACAAGTTGATCATGGGCATGGTCTCAACAATGATATGTATTGTCTTGGAAGAAGCTATTCTCAGACTTTTGATTTTGGATATCCTTCCAACTTCAATCCCATCAATGATTTTCAG

Protein sequence

MEQKQPSFNINNINVNGGSNIYSNMINVCEIQENPNWTLPIRQSSMAATNDLAFSINLYPPPTSANQISNIDGNGVGIGLHPIMNYNSVGRLNNYTNDYFLGTLPNFGFGDYNMNLNFDHVQVDHGHGLNNDMYCLGRSYSQTFDFGYPSNFNPINDFQ

Homology

[Close]

BLAST of Bhi09G000776 vs. TrEMBL
Match: tr|A0A0A0K9E6|A0A0A0K9E6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23
Identity = 70/134 (52.24%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 27  NVCEIQENPNWTLPIRQSSMAATNDLAFSINLYPPPTSANQISNIDGNGVGIGLHPIMNY 86
           N C  QE+PNW LPI QSSMA TNDLA S +L PPP SANQIS  D N   IG HPIM++
Sbjct: 420 NACLSQESPNWALPIGQSSMAPTNDLAVSTSLCPPPISANQISGNDSN--VIGFHPIMDF 479

Query: 87  NSVGRLNNYTNDYFLGT-LPNFGFGDYNMNLNFDHVQVDHGHGLNNDMYCLGRSYSQTFD 146
           NS G  NN  ND  LGT LPNFGFGDYN                           S+   
Sbjct: 480 NSFGGWNNTNNDPSLGTDLPNFGFGDYNY------------------------ENSEPLG 527

Query: 147 FGYPSNFNPINDFQ 160
           FGYP N N IN FQ
Sbjct: 540 FGYPLNLNTINGFQ 527

[Close]

BLAST of Bhi09G000776 vs. TrEMBL
Match: tr|A0A1S4DYK0|A0A1S4DYK0_CUCME (uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21
Identity = 68/134 (50.75%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 27  NVCEIQENPNWTLPIRQSSMAATNDLAFSINLYPPPTSANQISNIDGNGVGIGLHPIMNY 86
           NVCE QENPNW L I QSS A  +DLA S NL PPP SANQIS  DGN  GIG HPIM++
Sbjct: 266 NVCESQENPNWALQIGQSSTAPISDLAVSTNLCPPPISANQISGNDGN--GIGFHPIMDF 325

Query: 87  NSVGRLNNYTNDYFLGT-LPNFGFGDYNMNLNFDHVQVDHGHGLNNDMYCLGRSYSQTFD 146
           NS G  NN  ND FL T LPNF FG+   N                          +  D
Sbjct: 326 NSFGGWNNTNNDPFLDTDLPNFAFGNCYDN-------------------------PEPLD 372

Query: 147 FGYPSNFNPINDFQ 160
           F YP N N IN FQ
Sbjct: 386 FRYPLNLNTINGFQ 372

[Close]

BLAST of Bhi09G000776 vs. NCBI nr
Match: KGN44987.1 (hypothetical protein Csa_7G405930 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 7.2e-23
Identity = 70/134 (52.24%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 27  NVCEIQENPNWTLPIRQSSMAATNDLAFSINLYPPPTSANQISNIDGNGVGIGLHPIMNY 86
           N C  QE+PNW LPI QSSMA TNDLA S +L PPP SANQIS  D N   IG HPIM++
Sbjct: 420 NACLSQESPNWALPIGQSSMAPTNDLAVSTSLCPPPISANQISGNDSN--VIGFHPIMDF 479

Query: 87  NSVGRLNNYTNDYFLGT-LPNFGFGDYNMNLNFDHVQVDHGHGLNNDMYCLGRSYSQTFD 146
           NS G  NN  ND  LGT LPNFGFGDYN                           S+   
Sbjct: 480 NSFGGWNNTNNDPSLGTDLPNFGFGDYNY------------------------ENSEPLG 527

Query: 147 FGYPSNFNPINDFQ 160
           FGYP N N IN FQ
Sbjct: 540 FGYPLNLNTINGFQ 527

[Close]

BLAST of Bhi09G000776 vs. NCBI nr
Match: XP_016901048.1 (PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 5.2e-21
Identity = 68/134 (50.75%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 27  NVCEIQENPNWTLPIRQSSMAATNDLAFSINLYPPPTSANQISNIDGNGVGIGLHPIMNY 86
           NVCE QENPNW L I QSS A  +DLA S NL PPP SANQIS  DGN  GIG HPIM++
Sbjct: 266 NVCESQENPNWALQIGQSSTAPISDLAVSTNLCPPPISANQISGNDGN--GIGFHPIMDF 325

Query: 87  NSVGRLNNYTNDYFLGT-LPNFGFGDYNMNLNFDHVQVDHGHGLNNDMYCLGRSYSQTFD 146
           NS G  NN  ND FL T LPNF FG+   N                          +  D
Sbjct: 326 NSFGGWNNTNNDPFLDTDLPNFAFGNCYDN-------------------------PEPLD 372

Query: 147 FGYPSNFNPINDFQ 160
           F YP N N IN FQ
Sbjct: 386 FRYPLNLNTINGFQ 372

The following BLAST results are available for this feature:

BLAST of Bhi09G000776 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000776 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000776 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9E6\|A0A0A0K9E6_CUCSA	4.8e-23	52.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1	[more]
tr\|A0A1S4DYK0\|A0A1S4DYK0_CUCME	3.4e-21	50.75	uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=...	[more]

BLAST of Bhi09G000776 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44987.1	7.2e-23	52.24	hypothetical protein Csa_7G405930 [Cucumis sativus]	[more]
XP_016901048.1	5.2e-21	50.75	PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000776	Bhi09M000776	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi09G000776	Csa7G405930	Cucumber (Chinese Long) v2	cuwgoB691
Bhi09G000776	CSPI07G17890	Wild cucumber (PI 183967)	cpiwgoB703
Bhi09G000776	CsGy7G016350	Cucumber (Gy14) v2	cgybwgoB660

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000776	Cucumber (Gy14) v1	cgywgoB432
Bhi09G000776	Cucurbita maxima (Rimu)	cmawgoB0494
Bhi09G000776	Cucurbita maxima (Rimu)	cmawgoB1119
Bhi09G000776	Cucurbita moschata (Rifu)	cmowgoB0493
Bhi09G000776	Cucurbita moschata (Rifu)	cmowgoB1118
Bhi09G000776	Cucurbita pepo (Zucchini)	cpewgoB0210
Bhi09G000776	Cucurbita pepo (Zucchini)	cpewgoB0420
Bhi09G000776	Cucumber (Chinese Long) v3	cucwgoB716
Bhi09G000776	Bottle gourd (USVL1VR-Ls)	lsiwgoB271
Bhi09G000776	Melon (DHL92) v3.6.1	medwgoB255
Bhi09G000776	Melon (DHL92) v3.5.1	mewgoB254
Bhi09G000776	Watermelon (Charleston Gray)	wcgwgoB069
Bhi09G000776	Watermelon (97103) v2	wgowmbB615
Bhi09G000776	Watermelon (97103) v1	wgowmB586
Bhi09G000776	Silver-seed gourd	carwgoB0133
Bhi09G000776	Silver-seed gourd	carwgoB0674