Bhi09G000698 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000698
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	desiccation-related protein PCC13-62-like
Location	chr9 : 19065107 .. 19065310 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTCGGTCGCTCGGGGCAGAGAATCGGACCGAGTGCAACATTCTTGCCGCCGATTCTAACTCTCTTGCATATACAAGAACGCCACAGGAGCTCTTGCGAATAGTTTATGAAACCGGCAACGAAGGTGTCCCTGGTGCATTTTTTCCCAATGGTTTGAATGGAAGAATTGCAAGAAGCTTCATTCGAAAAAGGGACTAA

mRNA sequence

ATGGTTCCTCGGTCGCTCGGGGCAGAGAATCGGACCGAGTGCAACATTCTTGCCGCCGATTCTAACTCTCTTGCATATACAAGAACGCCACAGGAGCTCTTGCGAATAGTTTATGAAACCGGCAACGAAGGTGTCCCTGGTGCATTTTTTCCCAATGGTTTGAATGGAAGAATTGCAAGAAGCTTCATTCGAAAAAGGGACTAA

Coding sequence (CDS)

ATGGTTCCTCGGTCGCTCGGGGCAGAGAATCGGACCGAGTGCAACATTCTTGCCGCCGATTCTAACTCTCTTGCATATACAAGAACGCCACAGGAGCTCTTGCGAATAGTTTATGAAACCGGCAACGAAGGTGTCCCTGGTGCATTTTTTCCCAATGGTTTGAATGGAAGAATTGCAAGAAGCTTCATTCGAAAAAGGGACTAA

Protein sequence

MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIARSFIRKRD

Homology

[Close]

BLAST of Bhi09G000698 vs. Swiss-Prot
Match: sp|P22242|DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 6.3e-04
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGR 58
           +V   LGAE +   N+LA D NSLA+ RTP+  L           P AF P    G+
Sbjct: 243 IVEPELGAEGKISGNVLAGDKNSLAFPRTPERCLGSCTAAAMRPSPAAFIPKAPTGK 299

[Close]

BLAST of Bhi09G000698 vs. TAIR10
Match: AT3G62730.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-16
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 2   VPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIARS 61
           VP  LGAENRT  NIL+AD  SL+Y RT QE+LR++Y TG+E  PG F+P G NGRIAR 
Sbjct: 240 VPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARM 299

Query: 62  FI 64
           F+
Sbjct: 300 FL 301

[Close]

BLAST of Bhi09G000698 vs. TAIR10
Match: AT1G47980.1 (unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 2.4e-14
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VP+ +GAE +   N+L  +  SL++ RTP+E+LRIVY +GNE VPG F+P G +G IA+
Sbjct: 247 IVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGFYPKGADGEIAK 306

Query: 61  SFI 64
           S++
Sbjct: 307 SYL 309

[Close]

BLAST of Bhi09G000698 vs. TrEMBL
Match: tr|A0A1S4DZA6|A0A1S4DZA6_CUCME (desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC107991160 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-20
Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPRSLGAENRTE NILAAD NSL YTRTPQE+LRIVY +GNE VPG FFP G NGRIA 
Sbjct: 240 IVPRSLGAENRTEINILAADVNSLMYTRTPQEVLRIVYGSGNESVPGGFFPKGANGRIAE 299

Query: 61  SFIRKRD 68
            F R R+
Sbjct: 300 RFRRSRN 306

[Close]

BLAST of Bhi09G000698 vs. TrEMBL
Match: tr|K4CRQ8|K4CRQ8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101252109 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-17
Identity = 42/65 (64.62%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPR LGAENRTE N+++A+  SLAY+RTP ++LRIVY TG+E +PG F+PNG NG+IAR
Sbjct: 245 IVPRELGAENRTETNVISANYYSLAYSRTPPQILRIVYTTGDEHIPGGFYPNGANGKIAR 304

Query: 61  SFIRK 66
            F+RK
Sbjct: 305 DFLRK 309

[Close]

BLAST of Bhi09G000698 vs. TrEMBL
Match: tr|A0A0B0N4G5|A0A0B0N4G5_GOSAR (Desiccation-related PCC13-62 OS=Gossypium arboreum OX=29729 GN=F383_33869 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VP+ LGAENRT  N+L+AD NSL+Y RTPQE+LRIVY TGNE  PG FFP G NGRIAR
Sbjct: 243 IVPKELGAENRTTSNVLSADPNSLSYPRTPQEILRIVYSTGNEHRPGGFFPKGANGRIAR 302

Query: 61  SFI 64
            ++
Sbjct: 303 EYL 305

[Close]

BLAST of Bhi09G000698 vs. TrEMBL
Match: tr|A0A0D2P783|A0A0D2P783_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G052900 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VP+ LGAENRT  N+L+ADSNSL+Y RTPQE+LRIVY TG+E  PG FFP G NGRIAR
Sbjct: 259 IVPKELGAENRTTSNVLSADSNSLSYPRTPQEILRIVYSTGDEHRPGGFFPKGANGRIAR 318

Query: 61  SFI 64
            ++
Sbjct: 319 EYL 321

[Close]

BLAST of Bhi09G000698 vs. TrEMBL
Match: tr|A0A1U8NM68|A0A1U8NM68_GOSHI (desiccation-related protein PCC13-62-like OS=Gossypium hirsutum OX=3635 GN=LOC107949722 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-17
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VP+ LGAENRT  N+L+AD NSL+Y RTPQE+LRIVY TGNE  PG FFP G NGRIAR
Sbjct: 259 IVPKELGAENRTTSNVLSADPNSLSYPRTPQEILRIVYSTGNEHRPGGFFPKGGNGRIAR 318

Query: 61  SFI 64
            ++
Sbjct: 319 EYL 321

[Close]

BLAST of Bhi09G000698 vs. NCBI nr
Match: XP_016901050.1 (PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20
Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPRSLGAENRTE NILAAD NSL YTRTPQE+LRIVY +GNE VPG FFP G NGRIA 
Sbjct: 240 IVPRSLGAENRTEINILAADVNSLMYTRTPQEVLRIVYGSGNESVPGGFFPKGANGRIAE 299

Query: 61  SFIRKRD 68
            F R R+
Sbjct: 300 RFRRSRN 306

[Close]

BLAST of Bhi09G000698 vs. NCBI nr
Match: XP_022960201.1 (desiccation-related protein PCC13-62-like [Cucurbita moschata])

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPRSLGAENRTE N+LA D+ SL+Y RT QE+LRI+Y TG+E +PGAFFPNG NG IAR
Sbjct: 245 VVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGAFFPNGANGSIAR 304

Query: 61  SFIR 65
            F+R
Sbjct: 305 RFLR 308

[Close]

BLAST of Bhi09G000698 vs. NCBI nr
Match: XP_023515237.1 (desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPRSLGAENRTE N+LA D+ SL+Y RT QE+LRI+Y TG+E +PGAFFPNG NG IAR
Sbjct: 245 VVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGAFFPNGANGSIAR 304

Query: 61  SFIR 65
            F+R
Sbjct: 305 RFLR 308

[Close]

BLAST of Bhi09G000698 vs. NCBI nr
Match: XP_004246335.2 (desiccation-related protein PCC13-62-like [Solanum lycopersicum])

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 42/65 (64.62%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VPR LGAENRTE N+++A+  SLAY+RTP ++LRIVY TG+E +PG F+PNG NG+IAR
Sbjct: 245 IVPRELGAENRTETNVISANYYSLAYSRTPPQILRIVYTTGDEHIPGGFYPNGANGKIAR 304

Query: 61  SFIRK 66
            F+RK
Sbjct: 305 DFLRK 309

[Close]

BLAST of Bhi09G000698 vs. NCBI nr
Match: KHG06739.1 (Desiccation-related PCC13-62 [Gossypium arboreum])

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-17
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MVPRSLGAENRTECNILAADSNSLAYTRTPQELLRIVYETGNEGVPGAFFPNGLNGRIAR 60
           +VP+ LGAENRT  N+L+AD NSL+Y RTPQE+LRIVY TGNE  PG FFP G NGRIAR
Sbjct: 243 IVPKELGAENRTTSNVLSADPNSLSYPRTPQEILRIVYSTGNEHRPGGFFPKGANGRIAR 302

Query: 61  SFI 64
            ++
Sbjct: 303 EYL 305

The following BLAST results are available for this feature:

BLAST of Bhi09G000698 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P22242\|DRPE_CRAPL	6.3e-04	38.60	Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 ...	[more]

BLAST of Bhi09G000698 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62730.1	2.6e-16	62.90	unknown protein	[more]
AT1G47980.1	2.4e-14	49.21	unknown protein	[more]

BLAST of Bhi09G000698 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZA6\|A0A1S4DZA6_CUCME	2.7e-20	76.12	desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC10799116...	[more]
tr\|K4CRQ8\|K4CRQ8_SOLLC	1.3e-17	64.62	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101252109 PE=4 SV=1	[more]
tr\|A0A0B0N4G5\|A0A0B0N4G5_GOSAR	2.2e-17	68.25	Desiccation-related PCC13-62 OS=Gossypium arboreum OX=29729 GN=F383_33869 PE=4 S...	[more]
tr\|A0A0D2P783\|A0A0D2P783_GOSRA	2.2e-17	68.25	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G052900 PE=4 ...	[more]
tr\|A0A1U8NM68\|A0A1U8NM68_GOSHI	4.8e-17	68.25	desiccation-related protein PCC13-62-like OS=Gossypium hirsutum OX=3635 GN=LOC10...	[more]

BLAST of Bhi09G000698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901050.1	4.1e-20	76.12	PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]	[more]
XP_022960201.1	1.1e-17	70.31	desiccation-related protein PCC13-62-like [Cucurbita moschata]	[more]
XP_023515237.1	1.1e-17	70.31	desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo]	[more]
XP_004246335.2	1.9e-17	64.62	desiccation-related protein PCC13-62-like [Solanum lycopersicum]	[more]
KHG06739.1	3.3e-17	68.25	Desiccation-related PCC13-62 [Gossypium arboreum]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000698	Bhi09M000698	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31694	FAMILY NOT NAMED	coord: 1..65
None	No IPR available	PANTHER	PTHR31694:SF4	SUBFAMILY NOT NAMED	coord: 1..65

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000698	Cucumber (Gy14) v1	cgywgoB432
Bhi09G000698	Cucumber (Gy14) v2	cgybwgoB660
Bhi09G000698	Cucurbita maxima (Rimu)	cmawgoB0494
Bhi09G000698	Cucurbita maxima (Rimu)	cmawgoB1119
Bhi09G000698	Cucurbita maxima (Rimu)	cmawgoB1127
Bhi09G000698	Cucurbita moschata (Rifu)	cmowgoB0493
Bhi09G000698	Cucurbita moschata (Rifu)	cmowgoB1118
Bhi09G000698	Cucurbita pepo (Zucchini)	cpewgoB0210
Bhi09G000698	Cucurbita pepo (Zucchini)	cpewgoB0420
Bhi09G000698	Cucurbita pepo (Zucchini)	cpewgoB0819
Bhi09G000698	Wild cucumber (PI 183967)	cpiwgoB703
Bhi09G000698	Cucumber (Chinese Long) v3	cucwgoB716
Bhi09G000698	Cucumber (Chinese Long) v2	cuwgoB691
Bhi09G000698	Bottle gourd (USVL1VR-Ls)	lsiwgoB271
Bhi09G000698	Melon (DHL92) v3.6.1	medwgoB255
Bhi09G000698	Melon (DHL92) v3.5.1	mewgoB254
Bhi09G000698	Watermelon (Charleston Gray)	wcgwgoB069
Bhi09G000698	Watermelon (97103) v2	wgowmbB615
Bhi09G000698	Watermelon (97103) v1	wgowmB586
Bhi09G000698	Silver-seed gourd	carwgoB0133
Bhi09G000698	Silver-seed gourd	carwgoB0953