Bhi09G000338 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000338
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Leucine-rich repeat protein kinase family protein
Location	chr9 : 8609174 .. 8609372 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCCCAATGATGTTTACGATCGAGCGTGGGAAGTGTACAAAGATGATAACTATGCACAACTAAGTACCCTCGATTCTGTAGATGCTGATGGTTCTAACACTTACCATCCACCGGCTAAAGTCATGAACTCTTCTGCAACTCCAATGAGAGGGACCAAGTACCTTAATTTCTCATGGGACTCAACAAAACGAAAGTGA

mRNA sequence

GTTTCCCAATGATGTTTACGATCGAGCGTGGGAAGTGTACAAAGATGATAACTATGCACAACTAAGTACCCTCGATTCTGTAGATGCTGATGGTTCTAACACTTACCATCCACCGGCTAAAGTCATGAACTCTTCTGCAACTCCAATGAGAGGGACCAAGTACCTTAATTTCTCATGGGACTCAACAAAACGAAAGTGA

Coding sequence (CDS)

GTTTCCCAATGATGTTTACGATCGAGCGTGGGAAGTGTACAAAGATGATAACTATGCACAACTAAGTACCCTCGATTCTGTAGATGCTGATGGTTCTAACACTTACCATCCACCGGCTAAAGTCATGAACTCTTCTGCAACTCCAATGAGAGGGACCAAGTACCTTAATTTCTCATGGGACTCAACAAAACGAAAGTGA

Protein sequence

FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWDSTKRK

Homology

[Close]

BLAST of Bhi09G000338 vs. Swiss-Prot
Match: sp|Q9ZQR3|Y2451_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana OX=3702 GN=At2g14510 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.5e-05
Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P DVYDR W  Y    + Q++T  +V +  S+ Y+PP  V+ +++ P  G++ L F+W+
Sbjct: 210 YPEDVYDRVWMPYSQPEWTQINTTRNV-SGFSDGYNPPQGVIQTASIPTNGSEPLTFTWN 268

[Close]

BLAST of Bhi09G000338 vs. TAIR10
Match: AT1G51850.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 53.9 bits (128), Expect = 4.3e-08
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSW 60
           FP+DVYDR W  Y D+++ Q++T  ++D + S TY  P  VM  +ATP++    LN +W
Sbjct: 181 FPDDVYDRKWYPYFDNSWTQVTT--TLDVNTSLTYELPQSVMAKAATPIKANDTLNITW 237

[Close]

BLAST of Bhi09G000338 vs. TAIR10
Match: AT2G14510.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-06
Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P DVYDR W  Y    + Q++T  +V +  S+ Y+PP  V+ +++ P  G++ L F+W+
Sbjct: 210 YPEDVYDRVWMPYSQPEWTQINTTRNV-SGFSDGYNPPQGVIQTASIPTNGSEPLTFTWN 268

[Close]

BLAST of Bhi09G000338 vs. TAIR10
Match: AT3G46350.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-05
Identity = 22/66 (33.33%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMR-GTKYLNFSW 60
           FP DV+DR WE Y DD++ Q+ST  S+  + S+++  P   + ++ATP + G  Y+  ++
Sbjct: 212 FPMDVHDRMWESYFDDDWTQIST--SLTVNTSDSFRLPQAALITAATPAKDGPSYIGITF 271

Query: 61  DSTKRK 66
            ++  +
Sbjct: 272 STSSEE 275

[Close]

BLAST of Bhi09G000338 vs. TAIR10
Match: AT3G46330.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.3e-04
Identity = 21/59 (35.59%), Postives = 28/59 (47.46%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSW 60
           +P DVYDR+W  Y    + Q+ST  +V     N Y PP   +  +ATP      L   W
Sbjct: 210 YPKDVYDRSWVPYIQPEWNQISTTSNV--SNKNHYDPPQVALKMAATPTNLDAALTMVW 266

[Close]

BLAST of Bhi09G000338 vs. TrEMBL
Match: tr|A0A1S4E4C4|A0A1S4E4C4_CUCME (putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucumis melo OX=3656 GN=LOC103500808 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.8e-16
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P+D+YDRAWE Y DD+YA+LST DSVD DGSN Y P   VM ++ATP +G+KYLNF+W 
Sbjct: 194 YPDDIYDRAWEAYNDDDYAKLSTSDSVDGDGSNRYQPAPIVMKTAATPKKGSKYLNFTWY 253

Query: 61  S 62
           S
Sbjct: 254 S 254

[Close]

BLAST of Bhi09G000338 vs. TrEMBL
Match: tr|A0A0A0K7Y5|A0A0A0K7Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452180 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-15
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P+D+YDRAWE Y DDNYA LST DSVDA GSN++ P   VM ++ATP +G+KYLNF+W 
Sbjct: 219 YPDDIYDRAWEAYNDDNYATLSTSDSVDAYGSNSFQPAPIVMKTAATPKKGSKYLNFTWY 278

Query: 61  S 62
           S
Sbjct: 279 S 279

[Close]

BLAST of Bhi09G000338 vs. TrEMBL
Match: tr|A0A1S3CID7|A0A1S3CID7_CUCME (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Cucumis melo OX=3656 GN=LOC103500757 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-12
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           FP+D YDR WE+YKD+NYA LSTLDSV  D  N    PA VM ++AT  +G +YLNFSWD
Sbjct: 200 FPDDPYDRVWEIYKDNNYAPLSTLDSVVTD--NLEQTPAVVMQTAATSKKGIQYLNFSWD 258

Query: 61  S 62
           S
Sbjct: 260 S 258

[Close]

BLAST of Bhi09G000338 vs. TrEMBL
Match: tr|A0A0A0KB14|A0A0A0KB14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452170 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           FP D YDR W  Y  D+Y Q+ST++++ +D   +Y+P A VM S+ATP  G+KYLN+SW+
Sbjct: 200 FPYDDYDRVWNAYNGDDYTQISTINTLKSDNYYSYNPAAIVMQSAATPKNGSKYLNYSWN 259

Query: 61  STK 64
           S+K
Sbjct: 260 SSK 262

[Close]

BLAST of Bhi09G000338 vs. TrEMBL
Match: tr|A0A1S4E3M7|A0A1S4E3M7_CUCME (probable LRR receptor-like protein kinase At1g51890 OS=Cucumis melo OX=3656 GN=LOC107990303 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-11
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           FP D YDR W  Y  D+Y Q+ST +++ +D   +Y+P A VM S+ATP  G KYLN+SW+
Sbjct: 200 FPYDDYDRIWNAYNGDDYTQISTTNTLKSDNYKSYNPAAIVMQSAATPKNGRKYLNYSWN 259

Query: 61  STK 64
           S+K
Sbjct: 260 SSK 262

[Close]

BLAST of Bhi09G000338 vs. NCBI nr
Match: XP_016902830.1 (PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P+D+YDRAWE Y DD+YA+LST DSVD DGSN Y P   VM ++ATP +G+KYLNF+W 
Sbjct: 194 YPDDIYDRAWEAYNDDDYAKLSTSDSVDGDGSNRYQPAPIVMKTAATPKKGSKYLNFTWY 253

Query: 61  S 62
           S
Sbjct: 254 S 254

[Close]

BLAST of Bhi09G000338 vs. NCBI nr
Match: KGN45563.1 (hypothetical protein Csa_7G452180 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P+D+YDRAWE Y DDNYA LST DSVDA GSN++ P   VM ++ATP +G+KYLNF+W 
Sbjct: 219 YPDDIYDRAWEAYNDDNYATLSTSDSVDAYGSNSFQPAPIVMKTAATPKKGSKYLNFTWY 278

Query: 61  S 62
           S
Sbjct: 279 S 279

[Close]

BLAST of Bhi09G000338 vs. NCBI nr
Match: XP_011659809.1 (PREDICTED: probable LRR receptor-like protein kinase At1g51890 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           +P+D+YDRAWE Y DDNYA LST DSVDA GSN++ P   VM ++ATP +G+KYLNF+W 
Sbjct: 226 YPDDIYDRAWEAYNDDNYATLSTSDSVDAYGSNSFQPAPIVMKTAATPKKGSKYLNFTWY 285

Query: 61  S 62
           S
Sbjct: 286 S 286

[Close]

BLAST of Bhi09G000338 vs. NCBI nr
Match: XP_022144067.1 (LRR receptor-like serine/threonine-protein kinase IOS1 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           FP DVYDR WE Y  D+YAQLST D+VDA+G N YHP A VM ++ATP +G +YLNFSWD
Sbjct: 201 FPYDVYDRIWERYNGDDYAQLSTSDTVDANGHNNYHPAAIVMETAATPKKG-RYLNFSWD 260

Query: 61  S 62
           S
Sbjct: 261 S 260

[Close]

BLAST of Bhi09G000338 vs. NCBI nr
Match: XP_008462388.1 (PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 [Cucumis melo])

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-12
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 1   FPNDVYDRAWEVYKDDNYAQLSTLDSVDADGSNTYHPPAKVMNSSATPMRGTKYLNFSWD 60
           FP+D YDR WE+YKD+NYA LSTLDSV  D  N    PA VM ++AT  +G +YLNFSWD
Sbjct: 200 FPDDPYDRVWEIYKDNNYAPLSTLDSVVTD--NLEQTPAVVMQTAATSKKGIQYLNFSWD 258

Query: 61  S 62
           S
Sbjct: 260 S 258

The following BLAST results are available for this feature:

BLAST of Bhi09G000338 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZQR3\|Y2451_ARATH	2.5e-05	35.00	Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=A...	[more]

BLAST of Bhi09G000338 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G51850.1	4.3e-08	42.37	Leucine-rich repeat protein kinase family protein	[more]
AT2G14510.1	1.4e-06	35.00	Leucine-rich repeat protein kinase family protein	[more]
AT3G46350.1	2.6e-05	33.33	Leucine-rich repeat protein kinase family protein	[more]
AT3G46330.1	1.3e-04	35.59	Leucine-rich repeat protein kinase family protein	[more]

BLAST of Bhi09G000338 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E4C4\|A0A1S4E4C4_CUCME	8.8e-16	63.93	putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucumis m...	[more]
tr\|A0A0A0K7Y5\|A0A0A0K7Y5_CUCSA	2.6e-15	63.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452180 PE=4 SV=1	[more]
tr\|A0A1S3CID7\|A0A1S3CID7_CUCME	3.4e-12	62.30	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g1...	[more]
tr\|A0A0A0KB14\|A0A0A0KB14_CUCSA	2.9e-11	50.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452170 PE=4 SV=1	[more]
tr\|A0A1S4E3M7\|A0A1S4E3M7_CUCME	8.5e-11	50.79	probable LRR receptor-like protein kinase At1g51890 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Bhi09G000338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902830.1	1.3e-15	63.93	PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [...	[more]
KGN45563.1	3.9e-15	63.93	hypothetical protein Csa_7G452180 [Cucumis sativus]	[more]
XP_011659809.1	3.9e-15	63.93	PREDICTED: probable LRR receptor-like protein kinase At1g51890 [Cucumis sativus]	[more]
XP_022144067.1	1.5e-14	67.21	LRR receptor-like serine/threonine-protein kinase IOS1 [Momordica charantia]	[more]
XP_008462388.1	5.2e-12	62.30	PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein k...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024788	Malectin-like_Carb-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000338	Bhi09M000338	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024788	Malectin-like carbohydrate-binding domain	PFAM	PF12819	Malectin_like	coord: 1..62 e-value: 6.6E-12 score: 45.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000338	Cucumber (Gy14) v2	cgybwgoB659
Bhi09G000338	Cucurbita maxima (Rimu)	cmawgoB0488
Bhi09G000338	Cucurbita maxima (Rimu)	cmawgoB0607
Bhi09G000338	Cucurbita maxima (Rimu)	cmawgoB1129
Bhi09G000338	Cucurbita moschata (Rifu)	cmowgoB0487
Bhi09G000338	Cucurbita moschata (Rifu)	cmowgoB0605
Bhi09G000338	Cucurbita moschata (Rifu)	cmowgoB1127
Bhi09G000338	Cucurbita pepo (Zucchini)	cpewgoB0202
Bhi09G000338	Cucurbita pepo (Zucchini)	cpewgoB0415
Bhi09G000338	Cucurbita pepo (Zucchini)	cpewgoB0730
Bhi09G000338	Wild cucumber (PI 183967)	cpiwgoB702
Bhi09G000338	Cucumber (Chinese Long) v3	cucwgoB715
Bhi09G000338	Cucumber (Chinese Long) v2	cuwgoB690
Bhi09G000338	Bottle gourd (USVL1VR-Ls)	lsiwgoB270
Bhi09G000338	Melon (DHL92) v3.6.1	medwgoB240
Bhi09G000338	Melon (DHL92) v3.5.1	mewgoB239
Bhi09G000338	Watermelon (Charleston Gray)	wcgwgoB068
Bhi09G000338	Watermelon (97103) v2	wgowmbB614
Bhi09G000338	Watermelon (97103) v1	wgowmB585
Bhi09G000338	Silver-seed gourd	carwgoB1202
Bhi09G000338	Wax gourd	wgowgoB062
Bhi09G000338	Cucumber (Gy14) v1	cgywgoB719