Bhi09G000193 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000193
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Nbs-lrr resistance protein, putative
Location	chr9 : 5185291 .. 5185695 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGGGAATTGGTTGCTGGAGCTGTTTTGGGTGCTTTAGCAGGTGAGTTGCTGAAAGGAGTGATCAATTTGATGGAGAAAGCAATTCATTTCAAACCTGTGCTTGAAGAAATCAAGTCACAGGTTGAGTTTTTAATCCCATTGATGGAGCAGCTGGATGATCTTGGTGACAACATATTCCAGCTCCAATATTCTGAAAACTTGAAGCAACTCATACGTAAAGGGAACCAGCTCATTATGGAGTGTGAAGTTGCCAAGCAATCGATTTTAAAGTGTCCGAAGTTCCCGTTTTACACCAAGAAACTTTATAAATTAGACGGTGGACTTGAGAGGGTATCGCACAATTTTGCAACTGAACGAGTAGCAAATGAAGAAACTACAAGATTTGGAGATTACCAATGA

mRNA sequence

ATGGCAGGGGAATTGGTTGCTGGAGCTGTTTTGGGTGCTTTAGCAGGTGAGTTGCTGAAAGGAGTGATCAATTTGATGGAGAAAGCAATTCATTTCAAACCTGTGCTTGAAGAAATCAAGTCACAGGTTGAGTTTTTAATCCCATTGATGGAGCAGCTGGATGATCTTGGTGACAACATATTCCAGCTCCAATATTCTGAAAACTTGAAGCAACTCATACGTAAAGGGAACCAGCTCATTATGGAGTGTGAAGTTGCCAAGCAATCGATTTTAAAGTGTCCGAAGTTCCCGTTTTACACCAAGAAACTTTATAAATTAGACGGTGGACTTGAGAGGGTATCGCACAATTTTGCAACTGAACGAGTAGCAAATGAAGAAACTACAAGATTTGGAGATTACCAATGA

Coding sequence (CDS)

ATGGCAGGGGAATTGGTTGCTGGAGCTGTTTTGGGTGCTTTAGCAGGTGAGTTGCTGAAAGGAGTGATCAATTTGATGGAGAAAGCAATTCATTTCAAACCTGTGCTTGAAGAAATCAAGTCACAGGTTGAGTTTTTAATCCCATTGATGGAGCAGCTGGATGATCTTGGTGACAACATATTCCAGCTCCAATATTCTGAAAACTTGAAGCAACTCATACGTAAAGGGAACCAGCTCATTATGGAGTGTGAAGTTGCCAAGCAATCGATTTTAAAGTGTCCGAAGTTCCCGTTTTACACCAAGAAACTTTATAAATTAGACGGTGGACTTGAGAGGGTATCGCACAATTTTGCAACTGAACGAGTAGCAAATGAAGAAACTACAAGATTTGGAGATTACCAATGA

Protein sequence

MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGLERVSHNFATERVANEETTRFGDYQ

Homology

[Close]

BLAST of Bhi09G000193 vs. TAIR10
Match: AT5G66910.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 34/101 (33.66%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 8   GAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQLQYSE 67
           G+V GAL  E LK +I+  +K + FK V  E+ S +E L+P++++++ + D + +LQ   
Sbjct: 12  GSVAGALVSEGLKVLISEAKKVLAFKSVSNELASTMESLLPVIKEIESMQDGM-ELQ--- 71

Query: 68  NLKQLIRKGNQLIMEC-EVAKQSILKCPKFPFYTKKLYKLD 108
           +LK  I K   L+ +C  V K +I+   K   YT+K+ +++
Sbjct: 72  DLKDTIDKALLLVEKCSHVEKWNIILKSK---YTRKVEEIN 105

[Close]

BLAST of Bhi09G000193 vs. TrEMBL
Match: tr|A0A1S3B0M1|A0A1S3B0M1_CUCME (uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 4   ELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQL 63
           EL+ GA LGAL GELLK V+NLMEK +HFKP LE +KSQVEFL+PLM+Q+D+LG++ F+L
Sbjct: 5   ELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED-FKL 64

Query: 64  QYSE---NLKQLIRKGNQLIMECE-VAKQSIL-KCPKFPFYTKKLYKLDGGLERVSHNFA 121
           +YS+    LK LI KG QLI EC  VA QS L +  K P YTKKL +LD  L+R   N  
Sbjct: 65  RYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPRYTKKLRRLDAELKRAESNLR 124

[Close]

BLAST of Bhi09G000193 vs. TrEMBL
Match: tr|A0A0A0KFQ5|A0A0A0KFQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.8e-21
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 4   ELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQL 63
           EL+ GA LGAL GELLKGV+NLMEK++HFKP LE +KSQ+EFL PL++Q+D+LG++ F+L
Sbjct: 5   ELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED-FKL 64

Query: 64  QYS-ENLKQLIRKGNQLIMECEVA--KQSILKCPKFPF-YTKKLYKLDGGLERVSHNFAT 121
           +YS + LK LIRKG QLI EC  A  + ++ +  K    YTK L +LD  L+R   N   
Sbjct: 65  RYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRL 124

[Close]

BLAST of Bhi09G000193 vs. TrEMBL
Match: tr|A0A1S3B199|A0A1S3B199_CUCME (uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 4   ELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQL 63
           +L+ GA +GAL  +LL  V+ L+EKA+HFKP LE +KSQV FL+ LM+Q+D+LG++ F+L
Sbjct: 5   DLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGED-FKL 64

Query: 64  QYSE---NLKQLIRKGNQLIMEC-EVAKQSIL-KCPKFPFYTKKLYKLDGGLERVSHN 117
           +Y +    LK LI KG QLI EC +VA QS L +  K P YTKKL KLD  L+    N
Sbjct: 65  RYFDQTLKLKILINKGKQLIEECNDVAIQSTLSRYSKIPRYTKKLRKLDAELKSAQSN 121

[Close]

BLAST of Bhi09G000193 vs. TrEMBL
Match: tr|A0A0A0KJI0|A0A0A0KJI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490170 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-15
Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNI 60
           MA ELV GAVLGA+ GEL K ++NL E+AI F PVL++I+S++  ++PL++Q+D+L D +
Sbjct: 1   MALELVGGAVLGAVVGELFKAILNLGERAISFNPVLKDIRSKLNAIMPLVKQIDELNDYL 60

Query: 61  -FQLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGL 111
            +  + +E L+ L+ +G QL+++C   K   L   K P YT+KL +LD  L
Sbjct: 61  DYPKEETEKLRGLMDEGKQLLLQCGDVKLGDLNYLKRPSYTQKLRELDTAL 111

[Close]

BLAST of Bhi09G000193 vs. TrEMBL
Match: tr|A0A1S3B1E3|A0A1S3B1E3_CUCME (probable disease resistance protein At5g66900 OS=Cucumis melo OX=3656 GN=LOC103484757 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-15
Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 1   MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNI 60
           MA ELV GAVLG + GEL K V NL E+AI F PVL++I+S++  + PL++Q+D+L D +
Sbjct: 1   MALELVGGAVLGTVVGELFKAVSNLGERAISFNPVLKDIRSKLNAIFPLVKQIDELNDYL 60

Query: 61  -FQLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGL 111
            +  + +E L+ L+ +G +L+++C   K   L   K PFYTK+L +LD  L
Sbjct: 61  DYPKEETEKLRDLMDEGRRLLLQCGDVKLGDLNYLKKPFYTKRLRELDTAL 111

[Close]

BLAST of Bhi09G000193 vs. NCBI nr
Match: XP_008440239.1 (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-23
Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 4   ELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQL 63
           EL+ GA LGAL GELLK V+NLMEK +HFKP LE +KSQVEFL+PLM+Q+D+LG++ F+L
Sbjct: 5   ELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED-FKL 64

Query: 64  QYSE---NLKQLIRKGNQLIMECE-VAKQSIL-KCPKFPFYTKKLYKLDGGLERVSHNFA 121
           +YS+    LK LI KG QLI EC  VA QS L +  K P YTKKL +LD  L+R   N  
Sbjct: 65  RYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPRYTKKLRRLDAELKRAESNLR 124

[Close]

BLAST of Bhi09G000193 vs. NCBI nr
Match: XP_004142014.2 (PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus] >KGN48500.1 hypothetical protein Csa_6G490150 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 5.7e-21
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 4   ELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNIFQL 63
           EL+ GA LGAL GELLKGV+NLMEK++HFKP LE +KSQ+EFL PL++Q+D+LG++ F+L
Sbjct: 5   ELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED-FKL 64

Query: 64  QYS-ENLKQLIRKGNQLIMECEVA--KQSILKCPKFPF-YTKKLYKLDGGLERVSHNFAT 121
           +YS + LK LIRKG QLI EC  A  + ++ +  K    YTK L +LD  L+R   N   
Sbjct: 65  RYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRL 124

[Close]

BLAST of Bhi09G000193 vs. NCBI nr
Match: XP_023544702.1 (uncharacterized protein LOC111804208 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.4 bits (272), Expect = 9.7e-21
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1   MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDN- 60
           MA  LV+GAVLGAL GELLKG+++L EK+IHFKPVLEEI+ Q+EFL  +++QLDD     
Sbjct: 1   MAEGLVSGAVLGALFGELLKGILDLAEKSIHFKPVLEEIRVQLEFLSLVIQQLDDEHSGF 60

Query: 61  IFQLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGLERVSHN 117
           +   + + +L+ +I KG +LI +CE   QSIL   K PFYTKKL +LD    R S N
Sbjct: 61  LASAENTRSLRGVIEKGKKLIGKCEGVDQSILNYHKAPFYTKKLRQLDAEFGRASQN 117

[Close]

BLAST of Bhi09G000193 vs. NCBI nr
Match: XP_023544701.1 (uncharacterized protein LOC111804208 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.4 bits (272), Expect = 9.7e-21
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1   MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDN- 60
           MA  LV+GAVLGAL GELLKG+++L EK+IHFKPVLEEI+ Q+EFL  +++QLDD     
Sbjct: 1   MAEGLVSGAVLGALFGELLKGILDLAEKSIHFKPVLEEIRVQLEFLSLVIQQLDDEHSGF 60

Query: 61  IFQLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGLERVSHN 117
           +   + + +L+ +I KG +LI +CE   QSIL   K PFYTKKL +LD    R S N
Sbjct: 61  LASAENTRSLRGVIEKGKKLIGKCEGVDQSILNYHKAPFYTKKLRQLDAEFGRASQN 117

[Close]

BLAST of Bhi09G000193 vs. NCBI nr
Match: XP_022949783.1 (uncharacterized protein LOC111453073 isoform X2 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 8.2e-20
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 1   MAGELVAGAVLGALAGELLKGVINLMEKAIHFKPVLEEIKSQVEFLIPLMEQLDDLGDNI 60
           MA  LV+GAVLGAL GE+LKG+++L EK+IHFKPV+EE++ Q+EFL  +++QLDD     
Sbjct: 1   MAEGLVSGAVLGALFGEVLKGILDLAEKSIHFKPVVEEMRGQLEFLRLVIQQLDDEHSGF 60

Query: 61  F-QLQYSENLKQLIRKGNQLIMECEVAKQSILKCPKFPFYTKKLYKLDGGLERVSHN 117
               + + +L+ +I KG +LI +CE   QSIL   K PFYTKKL +LD    R S N
Sbjct: 61  LDSAENTRSLRGVIEKGKKLIGKCEGVDQSILNYHKAPFYTKKLRQLDAEFGRASQN 117

The following BLAST results are available for this feature:

BLAST of Bhi09G000193 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000193 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66910.1	1.2e-04	33.66	Disease resistance protein (CC-NBS-LRR class) family	[more]

BLAST of Bhi09G000193 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B0M1\|A0A1S3B0M1_CUCME	8.1e-24	59.02	uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=...	[more]
tr\|A0A0A0KFQ5\|A0A0A0KFQ5_CUCSA	3.8e-21	54.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=4 SV=1	[more]
tr\|A0A1S3B199\|A0A1S3B199_CUCME	1.1e-17	52.54	uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KJI0\|A0A0A0KJI0_CUCSA	4.0e-15	45.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490170 PE=3 SV=1	[more]
tr\|A0A1S3B1E3\|A0A1S3B1E3_CUCME	5.3e-15	45.05	probable disease resistance protein At5g66900 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Bhi09G000193 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440239.1	1.2e-23	59.02	PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo]	[more]
XP_004142014.2	5.7e-21	54.55	PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus] >KGN48500.1 hy...	[more]
XP_023544702.1	9.7e-21	53.85	uncharacterized protein LOC111804208 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023544701.1	9.7e-21	53.85	uncharacterized protein LOC111804208 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949783.1	8.2e-20	51.28	uncharacterized protein LOC111453073 isoform X2 [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0050832	defense response to fungus

Vocabulary: **INTERPRO**
Term	Definition
IPR039203	RPW8_fam
IPR008808	Powdery_mildew-R_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000193	Bhi09M000193	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008808	Powdery mildew resistance protein, RPW8 domain	PFAM	PF05659	RPW8	coord: 4..124 e-value: 1.4E-17 score: 63.6
IPR039203	RPW8 family	PANTHER	PTHR36766	FAMILY NOT NAMED	coord: 1..125

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000193	Cucumber (Gy14) v1	cgywgoB719
Bhi09G000193	Cucumber (Gy14) v2	cgybwgoB659
Bhi09G000193	Cucurbita maxima (Rimu)	cmawgoB0488
Bhi09G000193	Cucurbita maxima (Rimu)	cmawgoB1129
Bhi09G000193	Cucurbita moschata (Rifu)	cmowgoB0487
Bhi09G000193	Cucurbita moschata (Rifu)	cmowgoB1127
Bhi09G000193	Cucurbita pepo (Zucchini)	cpewgoB0202
Bhi09G000193	Cucurbita pepo (Zucchini)	cpewgoB0415
Bhi09G000193	Wild cucumber (PI 183967)	cpiwgoB702
Bhi09G000193	Cucumber (Chinese Long) v3	cucwgoB715
Bhi09G000193	Cucumber (Chinese Long) v2	cuwgoB690
Bhi09G000193	Bottle gourd (USVL1VR-Ls)	lsiwgoB270
Bhi09G000193	Melon (DHL92) v3.6.1	medwgoB240
Bhi09G000193	Melon (DHL92) v3.5.1	mewgoB239
Bhi09G000193	Watermelon (Charleston Gray)	wcgwgoB068
Bhi09G000193	Watermelon (97103) v2	wgowmbB614
Bhi09G000193	Watermelon (97103) v1	wgowmB585
Bhi09G000193	Silver-seed gourd	carwgoB0716
Bhi09G000193	Silver-seed gourd	carwgoB0901