Bhi09G000166 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09G000166
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr9 : 4562267 .. 4562419 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCGTGGCCGCCTGCCTAGTGGGGGCGGCTCCTCTGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCATAGCAATAGTAAGGGCGTTAAGACCGGAGCTATTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

mRNA sequence

ATGACCCGTGGCCGCCTGCCTAGTGGGGGCGGCTCCTCTGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCATAGCAATAGTAAGGGCGTTAAGACCGGAGCTATTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

Coding sequence (CDS)

ATGACCCGTGGCCGCCTGCCTAGTGGGGGCGGCTCCTCTGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCATAGCAATAGTAAGGGCGTTAAGACCGGAGCTATTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

Protein sequence

MTRGRLPSGGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSASSNASE

Homology

[Close]

BLAST of Bhi09G000166 vs. TrEMBL
Match: tr|A0A2P5YIU1|A0A2P5YIU1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05069 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-13
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   MTRGRLPSGGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSASSNASE 51
           +TRGRLP GGGSSVVGKRETRLYEP+ERLHS+SKG+K  A CSAS NASE
Sbjct: 102 ITRGRLPGGGGSSVVGKRETRLYEPKERLHSSSKGIKARAFCSASRNASE 151

[Close]

BLAST of Bhi09G000166 vs. TrEMBL
Match: tr|K4D7M5|K4D7M5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.5e-10
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 1  MTRGRLPSGGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSAS 46
          MTRGR+P GGGSS+VG +ETRLY+ EERLHS+S+GVK GA CSAS
Sbjct: 1  MTRGRVPGGGGSSIVGIQETRLYKLEERLHSSSRGVKRGAFCSAS 45

[Close]

BLAST of Bhi09G000166 vs. TrEMBL
Match: tr|A0A2U1QFT2|A0A2U1QFT2_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA035360 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.7e-04
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 1  MTRGRLPSGGGSSVVGKRETRLYEPEERLHSNSKGV 37
          MTRGRLP GGGSSVVGKRETRLYE    + S ++ V
Sbjct: 41 MTRGRLPGGGGSSVVGKRETRLYEAVNAIISEAQAV 76

[Close]

BLAST of Bhi09G000166 vs. NCBI nr
Match: PPS15510.1 (hypothetical protein GOBAR_AA05069 [Gossypium barbadense])

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-13
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   MTRGRLPSGGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSASSNASE 51
           +TRGRLP GGGSSVVGKRETRLYEP+ERLHS+SKG+K  A CSAS NASE
Sbjct: 102 ITRGRLPGGGGSSVVGKRETRLYEPKERLHSSSKGIKARAFCSASRNASE 151

[Close]

BLAST of Bhi09G000166 vs. NCBI nr
Match: XP_019420808.1 (PREDICTED: uncharacterized protein LOC109330987, partial [Lupinus angustifolius])

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-10
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 9   GGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSASSNASE 51
           GGGSSVVGKRETRLYEPEERL S+S+GV+TGA CSAS NASE
Sbjct: 150 GGGSSVVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNASE 191

[Close]

BLAST of Bhi09G000166 vs. NCBI nr
Match: OIV93954.1 (hypothetical protein TanjilG_05657 [Lupinus angustifolius])

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-09
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 9    GGGSSVVGKRETRLYEPEERLHSNSKGVKTGAICSASSNAS 50
            GGGSSVVGKRETRLYEPEERL S+S+GV+TGA CSAS NA+
Sbjct: 985  GGGSSVVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNAT 1025

The following BLAST results are available for this feature:

BLAST of Bhi09G000166 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi09G000166 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi09G000166 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5YIU1\|A0A2P5YIU1_GOSBA	1.1e-13	82.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05069 PE=4 SV...	[more]
tr\|K4D7M5\|K4D7M5_SOLLC	5.5e-10	75.56	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]
tr\|A0A2U1QFT2\|A0A2U1QFT2_ARTAN	7.7e-04	69.44	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA035360 PE=4 SV=1	[more]

BLAST of Bhi09G000166 vs. NCBI nr


Match Name	E-value	Identity	Description
PPS15510.1	1.6e-13	82.00	hypothetical protein GOBAR_AA05069 [Gossypium barbadense]	[more]
XP_019420808.1	4.9e-10	85.71	PREDICTED: uncharacterized protein LOC109330987, partial [Lupinus angustifolius]	[more]
OIV93954.1	4.1e-09	82.93	hypothetical protein TanjilG_05657 [Lupinus angustifolius]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000166	Bhi09M000166	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi09G000166	Cucumber (Gy14) v1	cgywgoB719
Bhi09G000166	Cucumber (Gy14) v2	cgybwgoB659
Bhi09G000166	Cucurbita maxima (Rimu)	cmawgoB0488
Bhi09G000166	Cucurbita maxima (Rimu)	cmawgoB1129
Bhi09G000166	Cucurbita moschata (Rifu)	cmowgoB0487
Bhi09G000166	Cucurbita moschata (Rifu)	cmowgoB1127
Bhi09G000166	Cucurbita pepo (Zucchini)	cpewgoB0202
Bhi09G000166	Cucurbita pepo (Zucchini)	cpewgoB0415
Bhi09G000166	Wild cucumber (PI 183967)	cpiwgoB702
Bhi09G000166	Cucumber (Chinese Long) v3	cucwgoB715
Bhi09G000166	Cucumber (Chinese Long) v2	cuwgoB690
Bhi09G000166	Bottle gourd (USVL1VR-Ls)	lsiwgoB270
Bhi09G000166	Melon (DHL92) v3.6.1	medwgoB240
Bhi09G000166	Melon (DHL92) v3.5.1	mewgoB239
Bhi09G000166	Watermelon (Charleston Gray)	wcgwgoB068
Bhi09G000166	Watermelon (97103) v2	wgowmbB614
Bhi09G000166	Watermelon (97103) v1	wgowmB585
Bhi09G000166	Silver-seed gourd	carwgoB0716
Bhi09G000166	Silver-seed gourd	carwgoB0901