Bhi09G000035 (gene) Wax gourd

Overview
NameBhi09G000035
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 838563 .. 839002 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCTCCTCTTCAGTAAAGTCGTTTTAGACTTAATTCAGAGAGAAAACAAAAAGAGACGGAGCAGATTGAGAAAAGGGGCGACATGGCTGGTCTACAGAGATCTGTGGTGTCCTTCCGCGGCAGGGATCTTCGTGTTGTTTGGGACGACAAAGTTCATTATCGGAGGAGCTTAAAAGTCGGGGAAAGACGACGGAAATCAGCGCCGTTGCGGAGCTGAGGATCCCAAGAAATATTCCCCGAATTCAAACGACTGACCCAAGCCGATCAAATCACGGCGAAGGGCGGGGGTTCCGGAGTAAAGAGACGGTGTCTCCGGCGGTGGAACCGCCGTCGCCTAGAGTTTCTGCTTGTGGACTCTGCAGCGCTTTCGGAAAATCGAGCGGCCAGAAACAGAGAGTGCCGGTGGCCGGCAAGCGCCGATCACGGTAGGTTTTGA

mRNA sequence

ATGCTCCTCCTCTTCAGTAAAGTCGTTTTAGACTTAATTCAGAGAGAAAACAAAAAGAGACGGAGCAGATTGAGAAAAGGGGCGACATGGCTGGTCTACAGAGATCTGTGGTGTCCTTCCGCGGCAGGGATCTTCGTGTTGTTTGGGACGACAAATCGGGGAAAGACGACGGAAATCAGCGCCGTTGCGGAGCTGAGGATCCCAAGAAATATTCCCCGAATTCAAACGACTGACCCAAGCCGATCAAATCACGGCGAAGGGCGGGGGTTCCGGAGTAAAGAGACGGTGTCTCCGGCGTTTCTGCTTGTGGACTCTGCAGCGCTTTCGGAAAATCGAGCGGCCAGAAACAGAGAGTGCCGGTGGCCGGCAAGCGCCGATCACGGTAGGTTTTGA

Coding sequence (CDS)

ATGCTCCTCCTCTTCAGTAAAGTCGTTTTAGACTTAATTCAGAGAGAAAACAAAAAGAGACGGAGCAGATTGAGAAAAGGGGCGACATGGCTGGTCTACAGAGATCTGTGGTGTCCTTCCGCGGCAGGGATCTTCGTGTTGTTTGGGACGACAAATCGGGGAAAGACGACGGAAATCAGCGCCGTTGCGGAGCTGAGGATCCCAAGAAATATTCCCCGAATTCAAACGACTGACCCAAGCCGATCAAATCACGGCGAAGGGCGGGGGTTCCGGAGTAAAGAGACGGTGTCTCCGGCGTTTCTGCTTGTGGACTCTGCAGCGCTTTCGGAAAATCGAGCGGCCAGAAACAGAGAGTGCCGGTGGCCGGCAAGCGCCGATCACGGTAGGTTTTGA

Protein sequence

MLLLFSKVVLDLIQRENKKRRSRLRKGATWLVYRDLWCPSAAGIFVLFGTTNRGKTTEISAVAELRIPRNIPRIQTTDPSRSNHGEGRGFRSKETVSPAFLLVDSAALSENRAARNRECRWPASADHGRF
Homology
[Close]
BLAST of Bhi09G000035 vs. TrEMBL
Match: tr|A0A0A0KA73|A0A0A0KA73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433180 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 49/83 (59.04%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 58  EISAVAELRIPRNIPRIQTTDPSRSNHGEGRGFRSKETVSP----------AFLLVDSAA 117
           E SA  ELR  RNIP I+T DP+RSNH EGRGFRSKET              FLLV SA 
Sbjct: 39  ESSAGPELRTARNIPPIKTNDPTRSNHAEGRGFRSKETKXXXXXXXXXRRLEFLLVGSAV 98

Query: 118 LSENRAARNRECRWPASADHGRF 131
           LS N+  RNRE  WP  ADHGRF
Sbjct: 99  LSGNQTGRNRERLWPEGADHGRF 121

[Close]
BLAST of Bhi09G000035 vs. TrEMBL
Match: tr|A0A1S3CEE2|A0A1S3CEE2_CUCME (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.1e-07
Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 58  EISAVAELRIPRNIPRIQTTDPSRSNHGEGRGFRSKETVSPA 100
           E SAV ELR  RNIP I+T DP+RSNH  GRGFRSKET SPA
Sbjct: 39  ESSAVPELRTARNIPPIKTNDPTRSNHAGGRGFRSKETASPA 80

[Close]
BLAST of Bhi09G000035 vs. NCBI nr
Match: KGN45287.1 (hypothetical protein Csa_7G433180 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-14
Identity = 49/83 (59.04%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 58  EISAVAELRIPRNIPRIQTTDPSRSNHGEGRGFRSKETVSP----------AFLLVDSAA 117
           E SA  ELR  RNIP I+T DP+RSNH EGRGFRSKET              FLLV SA 
Sbjct: 39  ESSAGPELRTARNIPPIKTNDPTRSNHAEGRGFRSKETKXXXXXXXXXRRLEFLLVGSAV 98

Query: 118 LSENRAARNRECRWPASADHGRF 131
           LS N+  RNRE  WP  ADHGRF
Sbjct: 99  LSGNQTGRNRERLWPEGADHGRF 121

[Close]
BLAST of Bhi09G000035 vs. NCBI nr
Match: XP_008461094.1 (PREDICTED: uncharacterized protein At1g15400-like [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 7.7e-07
Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 58  EISAVAELRIPRNIPRIQTTDPSRSNHGEGRGFRSKETVSPA 100
           E SAV ELR  RNIP I+T DP+RSNH  GRGFRSKET SPA
Sbjct: 39  ESSAVPELRTARNIPPIKTNDPTRSNHAGGRGFRSKETASPA 80

The following BLAST results are available for this feature:
BLAST of Bhi09G000035 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi09G000035 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi09G000035 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KA73|A0A0A0KA73_CUCSA1.5e-1459.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433180 PE=4 SV=1[more]
tr|A0A1S3CEE2|A0A1S3CEE2_CUCME5.1e-0773.81uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 P... [more]
BLAST of Bhi09G000035 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45287.12.2e-1459.04hypothetical protein Csa_7G433180 [Cucumis sativus][more]
XP_008461094.17.7e-0773.81PREDICTED: uncharacterized protein At1g15400-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000035Bhi09M000035mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi09G000035Csa7G433180Cucumber (Chinese Long) v2cuwgoB690
Bhi09G000035MELO3C023405Melon (DHL92) v3.5.1mewgoB239
Bhi09G000035CSPI07G20750Wild cucumber (PI 183967)cpiwgoB702
Bhi09G000035Cucsa.105300Cucumber (Gy14) v1cgywgoB162
Bhi09G000035Lsi02G027250Bottle gourd (USVL1VR-Ls)lsiwgoB270
Bhi09G000035CsGy7G019000Cucumber (Gy14) v2cgybwgoB659
Bhi09G000035MELO3C023405.2Melon (DHL92) v3.6.1medwgoB240
Bhi09G000035CsaV3_7G032570Cucumber (Chinese Long) v3cucwgoB715
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G000035Wax gourdwgowgoB064
Bhi09G000035Wax gourdwgowgoB131
Bhi09G000035Cucumber (Gy14) v1cgywgoB136
Bhi09G000035Cucumber (Gy14) v1cgywgoB254
Bhi09G000035Cucumber (Gy14) v1cgywgoB327
Bhi09G000035Cucumber (Gy14) v2cgybwgoB197
Bhi09G000035Cucumber (Gy14) v2cgybwgoB198
Bhi09G000035Cucumber (Gy14) v2cgybwgoB403
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB0070
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB0227
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB0492
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB0626
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB0965
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB1124
Bhi09G000035Cucurbita maxima (Rimu)cmawgoB1133
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB0065
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB0220
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB0491
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB0625
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB0962
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB1125
Bhi09G000035Cucurbita moschata (Rifu)cmowgoB1130
Bhi09G000035Cucurbita pepo (Zucchini)cpewgoB0160
Bhi09G000035Cucurbita pepo (Zucchini)cpewgoB0208
Bhi09G000035Cucurbita pepo (Zucchini)cpewgoB0417
Bhi09G000035Cucurbita pepo (Zucchini)cpewgoB0456
Bhi09G000035Cucurbita pepo (Zucchini)cpewgoB0721
Bhi09G000035Wild cucumber (PI 183967)cpiwgoB205
Bhi09G000035Wild cucumber (PI 183967)cpiwgoB208
Bhi09G000035Wild cucumber (PI 183967)cpiwgoB425
Bhi09G000035Cucumber (Chinese Long) v3cucwgoB211
Bhi09G000035Cucumber (Chinese Long) v3cucwgoB214
Bhi09G000035Cucumber (Chinese Long) v3cucwgoB429
Bhi09G000035Cucumber (Chinese Long) v2cuwgoB205
Bhi09G000035Cucumber (Chinese Long) v2cuwgoB208
Bhi09G000035Cucumber (Chinese Long) v2cuwgoB423
Bhi09G000035Bottle gourd (USVL1VR-Ls)lsiwgoB138
Bhi09G000035Bottle gourd (USVL1VR-Ls)lsiwgoB497
Bhi09G000035Bottle gourd (USVL1VR-Ls)lsiwgoB577
Bhi09G000035Melon (DHL92) v3.6.1medwgoB489
Bhi09G000035Melon (DHL92) v3.6.1medwgoB607
Bhi09G000035Melon (DHL92) v3.5.1mewgoB287
Bhi09G000035Melon (DHL92) v3.5.1mewgoB368
Bhi09G000035Melon (DHL92) v3.5.1mewgoB488
Bhi09G000035Melon (DHL92) v3.5.1mewgoB599
Bhi09G000035Watermelon (Charleston Gray)wcgwgoB068
Bhi09G000035Watermelon (Charleston Gray)wcgwgoB186
Bhi09G000035Watermelon (Charleston Gray)wcgwgoB538
Bhi09G000035Watermelon (Charleston Gray)wcgwgoB599
Bhi09G000035Watermelon (Charleston Gray)wcgwgoB659
Bhi09G000035Watermelon (97103) v2wgowmbB564
Bhi09G000035Watermelon (97103) v2wgowmbB590
Bhi09G000035Watermelon (97103) v2wgowmbB594
Bhi09G000035Watermelon (97103) v2wgowmbB607
Bhi09G000035Watermelon (97103) v2wgowmbB614
Bhi09G000035Watermelon (97103) v1wgowmB585
Bhi09G000035Watermelon (97103) v1wgowmB604
Bhi09G000035Watermelon (97103) v1wgowmB614
Bhi09G000035Watermelon (97103) v1wgowmB639
Bhi09G000035Watermelon (97103) v1wgowmB649
Bhi09G000035Silver-seed gourdcarwgoB0150
Bhi09G000035Silver-seed gourdcarwgoB0161
Bhi09G000035Silver-seed gourdcarwgoB0183
Bhi09G000035Silver-seed gourdcarwgoB0253
Bhi09G000035Silver-seed gourdcarwgoB0335
Bhi09G000035Silver-seed gourdcarwgoB0683
Bhi09G000035Silver-seed gourdcarwgoB0880
Bhi09G000035Silver-seed gourdcarwgoB1204