Bhi08G001686 (gene) Wax gourd

Overview
NameBhi08G001686
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr8 : 59580480 .. 59580752 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTATTCTTCATATGTTGGAGAAGGGAAAATTCACAATCGATATAGCTCAACCCAGTACTACGACTAGGGAAAATCTACCACCACATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAATATTCCTGTTGAGCAGTTGCCTTTTTCCTTCTCAACCAAGAGTGAGCCAGCTCCCTTGGTTAGCCAAGCAGGCTTTCAATCCATCATTGAGGATCATCAAAAGTTACGATCACAATTACAAACCTAG

mRNA sequence

ATGGAAACTATTCTTCATATGTTGGAGAAGGGAAAATTCACAATCGATATAGCTCAACCCAGTACTACGACTAGGGAAAATCTACCACCACATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAATATTCCTGTTGAGCAGTTGCCTTTTTCCTTCTCAACCAAGAGTGAGCCAGCTCCCTTGGTTAGCCAAGCAGGCTTTCAATCCATCATTGAGGATCATCAAAAGTTACGATCACAATTACAAACCTAG

Coding sequence (CDS)

ATGGAAACTATTCTTCATATGTTGGAGAAGGGAAAATTCACAATCGATATAGCTCAACCCAGTACTACGACTAGGGAAAATCTACCACCACATCCACCAATTGAAGGATTTATCCCAAAGTACACTGCATATAATCCTCTTTACAATATTCCTGTTGAGCAGTTGCCTTTTTCCTTCTCAACCAAGAGTGAGCCAGCTCCCTTGGTTAGCCAAGCAGGCTTTCAATCCATCATTGAGGATCATCAAAAGTTACGATCACAATTACAAACCTAG

Protein sequence

METILHMLEKGKFTIDIAQPSTTTRENLPPHPPIEGFIPKYTAYNPLYNIPVEQLPFSFSTKSEPAPLVSQAGFQSIIEDHQKLRSQLQT
Homology
[Close]
BLAST of Bhi08G001686 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05
Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 0 

Query: 1  METILHMLEKGKFTIDIAQPSTTTRE--NLPPHPP---------IEGFIPKYTAYNPLYN 60
          ++ I   LEKGK T D A  S    E    PP+PP          EGF+P+YT YNPLY+
Sbjct: 22 LDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYD 81

Query: 61 IPVEQLPFSFSTKSEPAP 68
          +P+ Q P +F   ++  P
Sbjct: 82 VPIGQYPHTFVKGAQQIP 99

The following BLAST results are available for this feature:
BLAST of Bhi08G001686 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi08G001686 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi08G001686 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi08G001686 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157796.15.0e-0539.74LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001686Bhi08M001686mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi08G001686Cucumber (Chinese Long) v2cuwgoB637
Bhi08G001686Bottle gourd (USVL1VR-Ls)lsiwgoB190
Bhi08G001686Bottle gourd (USVL1VR-Ls)lsiwgoB254
Bhi08G001686Melon (DHL92) v3.6.1medwgoB165
Bhi08G001686Melon (DHL92) v3.6.1medwgoB671
Bhi08G001686Melon (DHL92) v3.5.1mewgoB162
Bhi08G001686Melon (DHL92) v3.5.1mewgoB665
Bhi08G001686Watermelon (Charleston Gray)wcgwgoB242
Bhi08G001686Watermelon (Charleston Gray)wcgwgoB341
Bhi08G001686Watermelon (97103) v2wgowmbB459
Bhi08G001686Watermelon (97103) v2wgowmbB471
Bhi08G001686Watermelon (97103) v1wgowmB472
Bhi08G001686Watermelon (97103) v1wgowmB507
Bhi08G001686Silver-seed gourdcarwgoB0386
Bhi08G001686Silver-seed gourdcarwgoB0508
Bhi08G001686Silver-seed gourdcarwgoB0864
Bhi08G001686Silver-seed gourdcarwgoB0936
Bhi08G001686Wax gourdwgowgoB110
Bhi08G001686Cucumber (Gy14) v1cgywgoB029
Bhi08G001686Cucumber (Gy14) v1cgywgoB044
Bhi08G001686Cucumber (Gy14) v2cgybwgoB026
Bhi08G001686Cucumber (Gy14) v2cgybwgoB608
Bhi08G001686Cucurbita maxima (Rimu)cmawgoB0251
Bhi08G001686Cucurbita maxima (Rimu)cmawgoB0531
Bhi08G001686Cucurbita maxima (Rimu)cmawgoB0808
Bhi08G001686Cucurbita maxima (Rimu)cmawgoB1080
Bhi08G001686Cucurbita moschata (Rifu)cmowgoB0244
Bhi08G001686Cucurbita moschata (Rifu)cmowgoB0529
Bhi08G001686Cucurbita moschata (Rifu)cmowgoB0804
Bhi08G001686Cucurbita moschata (Rifu)cmowgoB1074
Bhi08G001686Cucurbita pepo (Zucchini)cpewgoB0039
Bhi08G001686Cucurbita pepo (Zucchini)cpewgoB0107
Bhi08G001686Cucurbita pepo (Zucchini)cpewgoB0619
Bhi08G001686Cucurbita pepo (Zucchini)cpewgoB0649
Bhi08G001686Wild cucumber (PI 183967)cpiwgoB029
Bhi08G001686Wild cucumber (PI 183967)cpiwgoB644
Bhi08G001686Cucumber (Chinese Long) v3cucwgoB032
Bhi08G001686Cucumber (Chinese Long) v3cucwgoB658
Bhi08G001686Cucumber (Chinese Long) v2cuwgoB029