Bhi08G001209 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G001209
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Gibberellin-regulated protein 2
Location	chr8 : 42837600 .. 42840156 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCAGGTTTGGAATCAGAGTAGTAAATGGCAGTTTTCAAAAGATATTTGTAGGTGTGGTTTCCCAAATATGTCCCCACCCCTACAGGCTTTCCAGCTCAAGCTTTCCCCACTCTCTTGAAATTTACCCCACAGCTTATGTCTATTTTTGGAAATTCACCCTTAATCTCTTCTCTTTATATAAACGAGACTCATGAATTAGTTGTAAAATATATTAAAGAAAGCCATGGCGGTTCGTAATTTCCTTCTTCTTCTTCTTCTTGGGCTCTTCGTCATCCTCTCCCTTTCACAGGTAAACTTCTCTTCCTTCTACACCCCTCCCTTTCATTTTTAGTTTTCGGTTTTTAAAAACCAATGCTATTTTCTTTCCGTTTCTTATTAATCTAATTTTCTCAAGAGCAATAATTGAATTTTTAGTCAAATTTTATATAAAAAAAATAAGTTTTTAAAAATTATTTTTTTTTTTTAATTTTCAAGGCTTAGTAGATAACAAAGGCATAAAATTTTTTTGGTAACTATTAAATGAGCTCTAAATTTAAAACTTGTTTTTATTTCTTTTTATTTAGAAAAATGAAAACTGTGGTTAGAGAATTGTGAGAAAAATAATAAGAATTTCTTAAAACTAAAACCCAAAAACTTCAAAAGGAATCCTAAGTTGCGTTTGATAATTATCTAGTGTTTAGTTTTTAATATTTAAAGTTTTTGTTTCTTTTTTCGTTACTAATTTTTTACCATTTTTTTATCATTTTCTAGCCAAACATTTGAATTCTTAGCTCGATTTTAAAACAAATCCAAGTTTTTTTTAAAAAAAAAAAAAAAAATTATATAGTTTTCAAAACTTGTCTCATCTTTTTAAAAACACTCATAAAAATGAGATAATCGATATTTTGATGTTTAAAAGCATAATTTTCAATTATATATCAAGGAAAAATTTATCATCTAGGTTTTATTTTTTTCAGAACTAATTTGAAAATGGTAGATTGAATCCTAAAAGAAGATAACAACTTAAACTAAAAGTAGGTTTGCGCTTTTTTACCTTTTTAACGTCTAAACATTAAAAAATTGGTGTCTTGAATTTTAAAAATGTGAATTAGATACTTAAATTTAATTTACATTCATTGACATATTCAAATACTAAAAAAAGAAAAGAAAAAATGAAAATCTAGCCAACACAAAAATTAAAGTTATGTTTAGTGACCATTTTATTTTTGGATTTTCTTTTGAAAACTAAACCTATTTCATCTATATTTCTTTTAATAATTTGTATCTTTACAATGATTGAATTCTTGGCCAAATTTTAAAAATAAAAACAACTTTTTGAAATCTATTTTTTTTAATTTTCAAAATTTGACTTAATTTTTTAAATTATTGGTGAAAAGTAAATAATAAAAAAAGAAAGTTAGAGATAAAAGTAGTCCACAAACTTAATTTTCAAATACAAAATGGTTATCAAGACCTAAAAAATTAAAATGGTTATCAAGACCTAAAAAATTTAAGATTCCATTGAAGAAGATAAAATTCAACTCTATATCTAATGGAATCAATTAATTTTTAAAAGATTCAAATAATATTATATAGTGTAATGGTTTAAATAGTAAAACTGCTCAAAAAAAAATTTAAGTATAACAAAATGTCTCTATTTTATCATGATAAATACTAATAGATATCTATCACTGTTTATCATTTAGTGATATTTTTATATATTTGTAAATTCTTTGACTCATTTTACTATATTTGAAAACAACTCTATTATATATTTGTAGAAGTTTAAGAATATAGTAATCACAAAGTTGAAAATTCTTAGTGAACTAAAATTAAGATAATAGATGTCTTGTCTAGCGAGTGATGTATGAGTTAGTGCAGGTATCTTCTGATGGCTACCCAGAAGAAGGGATGATGGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTGATGCAAAACATAAGTGAGGCAAAGAAATTAGAATGATGCATGAAACGAAACCTTTTTTCTTTCTTTTTATGTGTGTGAAAAAATGAAAGCATGACAATTGGGAATATTGCAGACTGTGGATGGGAATGCAAGCGGCGTTGCGGGGCGCACTCGAGGCCAAATCGGTGCATAAGAGCGTGCGGGACGTGCTGCTCACGATGCAAATGCGTGCCATCAGGAACGTCAGGCAACCGTGAGATGTGCGGCACTTGCTACACCAACATGACCACACATGGCAACAAAACCAAGTGCCCTTGACAACCATCATCGACTGCATTATCCTTTTTAGTCCACTCGGTTGTTTAATCTTTTGAGTTTCTTCTTCTTCTTTGATGTATGGTTAGAATGAGCCGCAAGAAGCTAAATACATTTTGGGATGCACCGGATTATTGTTGAAACTCTTCTATGCCTCCCAATTTCCTTTTTGTTTTATATTTTCATGTTACTATGCTTCCATTTACATTATTAGTTTTTGAAACTACATTTCCATATCAAATCTTTATAATCATTAATTAGGTGAAATTACTAATTTGGTCTTTATTAATTAGGGGATTCTCCAATTAGCATCTACA

mRNA sequence

GGGCAGGTTTGGAATCAGAGTAGTAAATGGCAGTTTTCAAAAGATATTTGTAGGTGTGGTTTCCCAAATATGTCCCCACCCCTACAGGCTTTCCAGCTCAAGCTTTCCCCACTCTCTTGAAATTTACCCCACAGCTTATGTCTATTTTTGGAAATTCACCCTTAATCTCTTCTCTTTATATAAACGAGACTCATGAATTAGTTGTAAAATATATTAAAGAAAGCCATGGCGGTTCGTAATTTCCTTCTTCTTCTTCTTCTTGGGCTCTTCGTCATCCTCTCCCTTTCACAGGTATCTTCTGATGGCTACCCAGAAGAAGGGATGATGGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTGATGCAAAACATAAACTGTGGATGGGAATGCAAGCGGCGTTGCGGGGCGCACTCGAGGCCAAATCGGTGCATAAGAGCGTGCGGGACGTGCTGCTCACGATGCAAATGCGTGCCATCAGGAACGTCAGGCAACCGTGAGATGTGCGGCACTTGCTACACCAACATGACCACACATGGCAACAAAACCAAGTGCCCTTGACAACCATCATCGACTGCATTATCCTTTTTAGTCCACTCGGTTGTTTAATCTTTTGAGTTTCTTCTTCTTCTTTGATGTATGGTTAGAATGAGCCGCAAGAAGCTAAATACATTTTGGGATGCACCGGATTATTGTTGAAACTCTTCTATGCCTCCCAATTTCCTTTTTGTTTTATATTTTCATGTTACTATGCTTCCATTTACATTATTAGTTTTTGAAACTACATTTCCATATCAAATCTTTATAATCATTAATTAGGTGAAATTACTAATTTGGTCTTTATTAATTAGGGGATTCTCCAATTAGCATCTACA

Coding sequence (CDS)

ATGGCGGTTCGTAATTTCCTTCTTCTTCTTCTTCTTGGGCTCTTCGTCATCCTCTCCCTTTCACAGGTATCTTCTGATGGCTACCCAGAAGAAGGGATGATGGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTGATGCAAAACATAAACTGTGGATGGGAATGCAAGCGGCGTTGCGGGGCGCACTCGAGGCCAAATCGGTGCATAAGAGCGTGCGGGACGTGCTGCTCACGATGCAAATGCGTGCCATCAGGAACGTCAGGCAACCGTGAGATGTGCGGCACTTGCTACACCAACATGACCACACATGGCAACAAAACCAAGTGCCCTTGA

Protein sequence

MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP

Homology

[Close]

BLAST of Bhi08G001209 vs. Swiss-Prot
Match: sp|P46688|GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+CG  CK RC   SR   C+RAC +CCSRC CVP GTSGN  +C  CY ++TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 114 CP 116
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Bhi08G001209 vs. Swiss-Prot
Match: sp|F4IQJ4|GASAB_ARATH (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.1e-15
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+C   C+ RC   SRPN C RACGTCC+RC CV  GTSGN + C  CY ++TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 114 CP 116
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Bhi08G001209 vs. Swiss-Prot
Match: sp|Q93X17|SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.9e-15
Identity = 45/106 (42.45%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 10  LLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWECKRRCGAHSR 69
           LLL L ++  +  + +D      + E  Y  K            I+CG  C  RC   SR
Sbjct: 11  LLLSLLLLEQVQSIQTDQVTSNAISEAAYSYK-----------KIDCGGACAARCRLSSR 70

Query: 70  PNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           P  C RACG   +RC CVP GTSGN E C  CY ++TTHGNK KCP
Sbjct: 71  PRLCNRACGXXXARCNCVPPGTSGNTETC-PCYASLTTHGNKRKCP 104

[Close]

BLAST of Bhi08G001209 vs. Swiss-Prot
Match: sp|Q9LFR3|GASAE_ARATH (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-14
Identity = 37/62 (59.68%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+C   C  RCG HSR N C+RA    C RCKCVP GT GN+E CG+CY NM T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRAXXXXCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 114 CP 116
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Bhi08G001209 vs. Swiss-Prot
Match: sp|P46687|GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-14
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLS---QVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCG 60
           MA+    L+LLL LF + +       + D    EG+++                  I+CG
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVGEGVVK------------------IDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
             CK RC   SRPN C+RAC +CC RC CVP GT+GN  +C  CY ++TT G + KCP
Sbjct: 61  GRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Bhi08G001209 vs. TAIR10
Match: AT4G09610.1 (GAST1 protein homolog 2)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+CG  CK RC   SR   C+RAC +CCSRC CVP GTSGN  +C  CY ++TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 114 CP 116
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Bhi08G001209 vs. TAIR10
Match: AT2G18420.1 (Gibberellin-regulated family protein)

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-16
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+C   C+ RC   SRPN C RACGTCC+RC CV  GTSGN + C  CY ++TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 114 CP 116
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Bhi08G001209 vs. TAIR10
Match: AT5G14920.1 (Gibberellin-regulated family protein)

HSP 1 Score: 80.9 bits (198), Expect = 5.7e-16
Identity = 37/62 (59.68%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 54  INCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTK 113
           I+C   C  RCG HSR N C+RA    C RCKCVP GT GN+E CG+CY NM T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRAXXXXCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 114 CP 116
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Bhi08G001209 vs. TAIR10
Match: AT4G09600.1 (GAST1 protein homolog 3)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLS---QVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCG 60
           MA+    L+LLL LF + +       + D    EG+++                  I+CG
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVGEGVVK------------------IDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
             CK RC   SRPN C+RAC +CC RC CVP GT+GN  +C  CY ++TT G + KCP
Sbjct: 61  GRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Bhi08G001209 vs. TAIR10
Match: AT1G75750.1 (GAST1 protein homolog 1)

HSP 1 Score: 77.4 bits (189), Expect = 6.4e-15
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 52  QNINCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNK 111
           + I+CG  C  RC    RP  C RACGTCC RC CVP GT GN + C  CY ++TTHG +
Sbjct: 36  KKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGR 95

Query: 112 TKCP 116
            KCP
Sbjct: 96  RKCP 98

[Close]

BLAST of Bhi08G001209 vs. TrEMBL
Match: tr|A0A0A0LW79|A0A0A0LW79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-37
Identity = 83/115 (72.17%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60
           MAVR FLLLLLLG+FV L LSQVSS+GY EEGM EMEYDEK+MRG NRRLMQ I+CG +C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           +RRCGAHSRPN               VP GTSGNREMCGTCYT+MTTHGN+TKCP
Sbjct: 61  RRRCGAHSRPNXXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Bhi08G001209 vs. TrEMBL
Match: tr|A0A1S3AVJ9|A0A1S3AVJ9_CUCME (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 86/118 (72.88%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGY--PEEGMMEMEYDE-KVMRGTNRRLMQNINCG 60
           MAVR FLLLLLLG+FV L LSQ+SSDGY   E GM EMEYDE +VMRG NRRLMQ I+CG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
            ECKRRCGAHSRPNR              VP GTSGNREMCGTCYT+MTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Bhi08G001209 vs. TrEMBL
Match: tr|A0A1S3AW57|A0A1S3AW57_CUCME (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 86/126 (68.25%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLS--------QVSSDGY--PEEGMMEMEYDE-KVMRGTNRR 60
           MAVR FLLLLLLG+FV L LS        Q+SSDGY   E GM EMEYDE +VMRG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNINCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHG 116
           LMQ I+CG ECKRRCGAHSRPNR              VP GTSGNREMCGTCYT+MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Bhi08G001209 vs. TrEMBL
Match: tr|A0A0L9TQK3|A0A0L9TQK3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g239600 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60
           MA+R    L+LLG+ +++ +++VSSD   E+  +    D   +R  NRRLMQ+I+CG +C
Sbjct: 1   MALRE---LVLLGILLLVCVAKVSSDVNTEKEELRFPDDPLTVRDGNRRLMQDIDCGGKC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           K RCGAHSRPN C RACGTCC RCKCVP GTSGNRE+CGTCYT+MTTHGNKTKCP
Sbjct: 61  KTRCGAHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 112

[Close]

BLAST of Bhi08G001209 vs. TrEMBL
Match: tr|A0A0S3R6K8|A0A0S3R6K8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G408700 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60
           MA+R    L+LLG+ +++ +++VSSD   E+  +    D   +R  NRRLMQ+I+CG +C
Sbjct: 1   MALRE---LVLLGILLLVCVAKVSSDVNTEKEELRFPDDPLTVRDGNRRLMQDIDCGGKC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           K RCGAHSRPN C RACGTCC RCKCVP GTSGNRE+CGTCYT+MTTHGNKTKCP
Sbjct: 61  KTRCGAHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 112

[Close]

BLAST of Bhi08G001209 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_1G045890 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 4.9e-37
Identity = 83/115 (72.17%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60
           MAVR FLLLLLLG+FV L LSQVSS+GY EEGM EMEYDEK+MRG NRRLMQ I+CG +C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           +RRCGAHSRPN               VP GTSGNREMCGTCYT+MTTHGN+TKCP
Sbjct: 61  RRRCGAHSRPNXXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Bhi08G001209 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35
Identity = 86/118 (72.88%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGY--PEEGMMEMEYDE-KVMRGTNRRLMQNINCG 60
           MAVR FLLLLLLG+FV L LSQ+SSDGY   E GM EMEYDE +VMRG NRRLMQ I+CG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
            ECKRRCGAHSRPNR              VP GTSGNREMCGTCYT+MTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Bhi08G001209 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 86/126 (68.25%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLS--------QVSSDGY--PEEGMMEMEYDE-KVMRGTNRR 60
           MAVR FLLLLLLG+FV L LS        Q+SSDGY   E GM EMEYDE +VMRG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNINCGWECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHG 116
           LMQ I+CG ECKRRCGAHSRPNR              VP GTSGNREMCGTCYT+MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRXXXXXXXXXXXXXXVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Bhi08G001209 vs. NCBI nr
Match: XP_017429364.1 (PREDICTED: snakin-2-like [Vigna angularis] >KOM32840.1 hypothetical protein LR48_Vigan01g239600 [Vigna angularis] >BAT76125.1 hypothetical protein VIGAN_01408700 [Vigna angularis var. angularis])

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60
           MA+R    L+LLG+ +++ +++VSSD   E+  +    D   +R  NRRLMQ+I+CG +C
Sbjct: 1   MALRE---LVLLGILLLVCVAKVSSDVNTEKEELRFPDDPLTVRDGNRRLMQDIDCGGKC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
           K RCGAHSRPN C RACGTCC RCKCVP GTSGNRE+CGTCYT+MTTHGNKTKCP
Sbjct: 61  KTRCGAHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 112

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BLAST of Bhi08G001209 vs. NCBI nr
Match: XP_007155392.1 (hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris] >ESW27386.1 hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris])

HSP 1 Score: 146.7 bits (369), Expect = 4.7e-32
Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEK--VMRGTNRRLMQNINCGW 60
           MA+R    LLL+G+F+++ L++VSSD   E+   E+ + +   ++R  NRRLMQ+I+CG 
Sbjct: 1   MALRE---LLLMGIFLLVCLAKVSSDVNIEKEENELPFPDNSLIVRDGNRRLMQDIDCGG 60

Query: 61  ECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 116
            CK RCG HSRPN C RACGTCC RCKCVP GTSGNRE+CGTCYT+MTTHGNKTKCP
Sbjct: 61  LCKTRCGVHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 114

The following BLAST results are available for this feature:

BLAST of Bhi08G001209 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46688\|GASA2_ARATH	2.1e-15	58.06	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
sp\|F4IQJ4\|GASAB_ARATH	6.1e-15	58.06	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
sp\|Q93X17\|SNAK2_SOLTU	7.9e-15	42.45	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
sp\|Q9LFR3\|GASAE_ARATH	1.0e-14	59.68	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ...	[more]
sp\|P46687\|GASA3_ARATH	2.3e-14	38.98	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]

BLAST of Bhi08G001209 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09610.1	1.2e-16	58.06	GAST1 protein homolog 2	[more]
AT2G18420.1	3.4e-16	58.06	Gibberellin-regulated family protein	[more]
AT5G14920.1	5.7e-16	59.68	Gibberellin-regulated family protein	[more]
AT4G09600.1	1.3e-15	38.98	GAST1 protein homolog 3	[more]
AT1G75750.1	6.4e-15	54.69	GAST1 protein homolog 1	[more]

BLAST of Bhi08G001209 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW79\|A0A0A0LW79_CUCSA	3.2e-37	72.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=4 SV=1	[more]
tr\|A0A1S3AVJ9\|A0A1S3AVJ9_CUCME	1.0e-35	72.88	snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=4 SV=1	[more]
tr\|A0A1S3AW57\|A0A1S3AW57_CUCME	1.7e-33	68.25	snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=4 SV=1	[more]
tr\|A0A0L9TQK3\|A0A0L9TQK3_PHAAN	1.4e-32	62.61	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g239600 PE...	[more]
tr\|A0A0S3R6K8\|A0A0S3R6K8_PHAAN	1.4e-32	62.61	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G...	[more]

BLAST of Bhi08G001209 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64291.1	4.9e-37	72.17	hypothetical protein Csa_1G045890 [Cucumis sativus]	[more]
XP_008438104.1	1.6e-35	72.88	PREDICTED: snakin-2-like isoform X2 [Cucumis melo]	[more]
XP_008438094.1	2.5e-33	68.25	PREDICTED: snakin-2-like isoform X1 [Cucumis melo]	[more]
XP_017429364.1	2.1e-32	62.61	PREDICTED: snakin-2-like [Vigna angularis] >KOM32840.1 hypothetical protein LR48...	[more]
XP_007155392.1	4.7e-32	62.39	hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris] >ESW27386.1 hypothet...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001209	Bhi08M001209	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 55..115 e-value: 4.8E-20 score: 71.4
None	No IPR available	PANTHER	PTHR23201:SF18	GIBBERELLIN-REGULATED PROTEIN 14-RELATED	coord: 8..115
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 8..115

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G001209	Csa1G045890	Cucumber (Chinese Long) v2	cuwgoB028
Bhi08G001209	MELO3C002243	Melon (DHL92) v3.5.1	mewgoB173
Bhi08G001209	ClCG01G014080	Watermelon (Charleston Gray)	wcgwgoB239
Bhi08G001209	CSPI01G08280	Wild cucumber (PI 183967)	cpiwgoB028
Bhi08G001209	Cucsa.098240	Cucumber (Gy14) v1	cgywgoB140
Bhi08G001209	CmaCh18G001490	Cucurbita maxima (Rimu)	cmawgoB0520
Bhi08G001209	CmoCh18G001170	Cucurbita moschata (Rifu)	cmowgoB0516
Bhi08G001209	CsGy1G008190	Cucumber (Gy14) v2	cgybwgoB025
Bhi08G001209	MELO3C002243.2	Melon (DHL92) v3.6.1	medwgoB175
Bhi08G001209	Carg06708	Silver-seed gourd	carwgoB0600
Bhi08G001209	CsaV3_1G008270	Cucumber (Chinese Long) v3	cucwgoB031
Bhi08G001209	Cla97C01G013050	Watermelon (97103) v2	wgowmbB457

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G001209	Cucumber (Gy14) v2	cgybwgoB060
Bhi08G001209	Cucurbita maxima (Rimu)	cmawgoB0066
Bhi08G001209	Cucurbita moschata (Rifu)	cmowgoB0060
Bhi08G001209	Wild cucumber (PI 183967)	cpiwgoB061
Bhi08G001209	Cucumber (Chinese Long) v3	cucwgoB062
Bhi08G001209	Cucumber (Chinese Long) v2	cuwgoB061
Bhi08G001209	Melon (DHL92) v3.5.1	mewgoB282
Bhi08G001209	Watermelon (97103) v2	wgowmbB499
Bhi08G001209	Watermelon (97103) v1	wgowmB526