Bhi08G000758 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000758
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr8 : 29154533 .. 29154850 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCCTTTTCGAGTTTGTTTATTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGAAAGCATTAGGCATCAAGGAGTTGAGATCTCTAGCTCCAATTACCACCAGAAAACACCAGCGGAGAAAACGAAGCACGTTGTTGCCTCAAGCGGCGAAACTAACCGCCGATTGGAAGCCATCGCTGGGAACAATCTCAGAGGATAAGGTAGTCCTGGTAGTGGTGGGTGAACCCATTGCTGAAATAGGCCTCACAAGAACGAGGAGGGACAGGGGAGTGAGACTAAGGGAGATAAGAAGGTAA

mRNA sequence

ATGAAATTCCTTTTCGAGTTTGTTTATTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGAAAGCATTAGGCATCAAGGAGTTGAGATCTCTAGCTCCAATTACCACCAGAAAACACCAGCGGAGAAAACGAAGCACGTTGTTGCCTCAAGCGGCGAAACTAACCGCCGATTGGAAGCCATCGCTGGGAACAATCTCAGAGGATAAGGTAGTCCTGGTAGTGGTGGGTGAACCCATTGCTGAAATAGGCCTCACAAGAACGAGGAGGGACAGGGGAGTGAGACTAAGGGAGATAAGAAGGTAA

Coding sequence (CDS)

ATGAAATTCCTTTTCGAGTTTGTTTATTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAAACGAAAGCATTAGGCATCAAGGAGTTGAGATCTCTAGCTCCAATTACCACCAGAAAACACCAGCGGAGAAAACGAAGCACGTTGTTGCCTCAAGCGGCGAAACTAACCGCCGATTGGAAGCCATCGCTGGGAACAATCTCAGAGGATAAGGTAGTCCTGGTAGTGGTGGGTGAACCCATTGCTGAAATAGGCCTCACAAGAACGAGGAGGGACAGGGGAGTGAGACTAAGGGAGATAAGAAGGTAA

Protein sequence

MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQAAKLTADWKPSLGTISEDKVVLVVVGEPIAEIGLTRTRRDRGVRLREIRR

Homology

[Close]

BLAST of Bhi08G000758 vs. TrEMBL
Match: tr|A0A1S3BTM8|A0A1S3BTM8_CUCME (uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQ-AAKL 60
          MKFLFEFV CCVPVNMSRIENPEET+A   KE+R+LAPITTRKH+RRKRS LLP  AAKL
Sbjct: 1  MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 61 TADWKPSLGTISEDKVVLVVV 81
           ADWKPSLG ISEDKVVLVV+
Sbjct: 61 AADWKPSLGAISEDKVVLVVM 81

[Close]

BLAST of Bhi08G000758 vs. TrEMBL
Match: tr|A0A0A0L6G1|A0A0A0L6G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24
Identity = 63/81 (77.78%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQ-AAKL 60
          MKFLFEFV CCVPVNMSRI+NPEET+A G KE+RSL PITTRKH     S LLP  AAKL
Sbjct: 1  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHXXXXXSALLPSAAAKL 60

Query: 61 TADWKPSLGTISEDKVVLVVV 81
           ADWKPSLG ISEDKVVLVV+
Sbjct: 61 AADWKPSLGAISEDKVVLVVM 81

[Close]

BLAST of Bhi08G000758 vs. NCBI nr
Match: XP_008452335.1 (PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQ-AAKL 60
          MKFLFEFV CCVPVNMSRIENPEET+A   KE+R+LAPITTRKH+RRKRS LLP  AAKL
Sbjct: 1  MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 61 TADWKPSLGTISEDKVVLVVV 81
           ADWKPSLG ISEDKVVLVV+
Sbjct: 61 AADWKPSLGAISEDKVVLVVM 81

[Close]

BLAST of Bhi08G000758 vs. NCBI nr
Match: XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27
Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQAAKLT 60
          MKFLFEFV CCVPVNMSR+ENPE T A G++E++SLAPITTRKH+RRKR  LLP AAKL 
Sbjct: 1  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 61 ADWKPSLGTISEDKVVLVV 80
          ADWKPSLG ISEDKVVLV+
Sbjct: 61 ADWKPSLGAISEDKVVLVL 79

[Close]

BLAST of Bhi08G000758 vs. NCBI nr
Match: XP_022985273.1 (uncharacterized protein LOC111483313 [Cucurbita maxima])

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQAAKLT 60
          MKFLFEFV CCVPVNMSR+ENPE T A G++E++SLAPI TRKH+RRKR  LLP AAKL 
Sbjct: 1  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPIATRKHRRRKRGALLPSAAKLA 60

Query: 61 ADWKPSLGTISEDKVVLVV 80
          ADWKPSLG ISEDKVVLV+
Sbjct: 61 ADWKPSLGAISEDKVVLVL 79

[Close]

BLAST of Bhi08G000758 vs. NCBI nr
Match: XP_004149939.2 (PREDICTED: uncharacterized protein LOC101213465 [Cucumis sativus] >KGN56182.1 hypothetical protein Csa_3G094500 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 63/81 (77.78%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQ-AAKL 60
          MKFLFEFV CCVPVNMSRI+NPEET+A G KE+RSL PITTRKH     S LLP  AAKL
Sbjct: 1  MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHXXXXXSALLPSAAAKL 60

Query: 61 TADWKPSLGTISEDKVVLVVV 81
           ADWKPSLG ISEDKVVLVV+
Sbjct: 61 AADWKPSLGAISEDKVVLVVM 81

[Close]

BLAST of Bhi08G000758 vs. NCBI nr
Match: XP_022942037.1 (uncharacterized protein LOC111447225 [Cucurbita moschata])

HSP 1 Score: 109.0 bits (271), Expect = 9.9e-21
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 1  MKFLFEFVYCCVPVNMSRIENPEETKALGIKELRSLAPITTRKHQRRKRSTLLPQAAKLT 60
          MKFL EFV CCVPV++SR+ENPE T+A G +E+RSLAPITTR H+RR+R  L   AAK+ 
Sbjct: 1  MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60

Query: 61 ADWKPSLGTISEDKVVLVVV 81
           DW PSLG ISED VVLVV+
Sbjct: 61 GDWTPSLGAISEDNVVLVVM 80

The following BLAST results are available for this feature:

BLAST of Bhi08G000758 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi08G000758 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi08G000758 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BTM8\|A0A1S3BTM8_CUCME	1.6e-27	82.72	uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=...	[more]
tr\|A0A0A0L6G1\|A0A0A0L6G1_CUCSA	1.3e-24	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1	[more]

BLAST of Bhi08G000758 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452335.1	2.4e-27	82.72	PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo]	[more]
XP_022932132.1	3.2e-27	79.75	uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 unchar...	[more]
XP_022985273.1	1.2e-26	78.48	uncharacterized protein LOC111483313 [Cucurbita maxima]	[more]
XP_004149939.2	1.9e-24	77.78	PREDICTED: uncharacterized protein LOC101213465 [Cucumis sativus] >KGN56182.1 hy...	[more]
XP_022942037.1	9.9e-21	67.50	uncharacterized protein LOC111447225 [Cucurbita moschata]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000758	Bhi08M000758	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35318	FAMILY NOT NAMED	coord: 1..78

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000758	Cucumber (Gy14) v1	cgywgoB468
Bhi08G000758	Cucumber (Gy14) v1	cgywgoB469
Bhi08G000758	Cucumber (Gy14) v2	cgybwgoB028
Bhi08G000758	Cucumber (Gy14) v2	cgybwgoB053
Bhi08G000758	Cucurbita maxima (Rimu)	cmawgoB0253
Bhi08G000758	Cucurbita maxima (Rimu)	cmawgoB0532
Bhi08G000758	Cucurbita moschata (Rifu)	cmowgoB0246
Bhi08G000758	Cucurbita moschata (Rifu)	cmowgoB0530
Bhi08G000758	Cucurbita pepo (Zucchini)	cpewgoB0040
Bhi08G000758	Cucurbita pepo (Zucchini)	cpewgoB0651
Bhi08G000758	Wild cucumber (PI 183967)	cpiwgoB031
Bhi08G000758	Wild cucumber (PI 183967)	cpiwgoB056
Bhi08G000758	Cucumber (Chinese Long) v3	cucwgoB034
Bhi08G000758	Cucumber (Chinese Long) v3	cucwgoB058
Bhi08G000758	Cucumber (Chinese Long) v2	cuwgoB031
Bhi08G000758	Cucumber (Chinese Long) v2	cuwgoB056
Bhi08G000758	Bottle gourd (USVL1VR-Ls)	lsiwgoB255
Bhi08G000758	Melon (DHL92) v3.6.1	medwgoB167
Bhi08G000758	Melon (DHL92) v3.5.1	mewgoB164
Bhi08G000758	Watermelon (Charleston Gray)	wcgwgoB236
Bhi08G000758	Watermelon (Charleston Gray)	wcgwgoB240
Bhi08G000758	Watermelon (97103) v2	wgowmbB458
Bhi08G000758	Watermelon (97103) v1	wgowmB497
Bhi08G000758	Silver-seed gourd	carwgoB0484