Bhi08G000523 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTGCCAATTTTCTCAGCATTCCCAACTATTTTTCCAGCTTCTATTCCATCAATACCTTCCCCGTCGCCACCGTGGTCGCCGTCGTGGTCACTGCTTGAAGTATATCCATACGAGTATTTGGCTGCGGTATTCATATTGCTTCTCTTTATAGTCTATATCTACTTAGTCATTATCTTTAACAAAAGAGCTGACAGATCCGACAAGGAAGAGTTGTTAGAGACTGTGGAGACCGAAGCACCGGTTTTCAGTTATAGTGAAGATGGCGGTGACAAAGAATGTGTGATTTGCCTTTGCCAAATTGAAAAAGAGGAGAAGTGCAGGAGGATGAACACGTGCAATCACGTGTTTCATAAGGATTGTATTGACCAATGGTTTATGGTTGAGCACCACTGTCCTCTTTGTCGAACTGTCATTTGTGTGGTGGTTGATAGTGATGGAAATACCGTGGATTCTTCTCCTATACTCCCATTTGATAGGAATTATTACAATTTTTTAGGATCTGTTTGGTAG ATGCCGTTGCCAATTTTCTCAGCATTCCCAACTATTTTTCCAGCTTCTATTCCATCAATACCTTCCCCGTCGCCACCGTGGTCGCCGTCGTGGTCACTGCTTGAAGTATATCCATACGAGTATTTGGCTGCGGTATTCATATTGCTTCTCTTTATAGTCTATATCTACTTAGTCATTATCTTTAACAAAAGAGCTGACAGATCCGACAAGGAAGAGTTGTTAGAGACTGTGGAGACCGAAGCACCGGTTTTCAGTTATAGTGAAGATGGCGGTGACAAAGAATGTGTGATTTGCCTTTGCCAAATTGAAAAAGAGGAGAAGTGCAGGAGGATGAACACGTGCAATCACGTGTTTCATAAGGATTGTATTGACCAATGGTTTATGGTTGAGCACCACTGTCCTCTTTGTCGAACTGTCATTTGTGTGGTGGTTGATAGTGATGGAAATACCGTGGATTCTTCTCCTATACTCCCATTTGATAGGAATTATTACAATTTTTTAGGATCTGTTTGGTAG ATGCCGTTGCCAATTTTCTCAGCATTCCCAACTATTTTTCCAGCTTCTATTCCATCAATACCTTCCCCGTCGCCACCGTGGTCGCCGTCGTGGTCACTGCTTGAAGTATATCCATACGAGTATTTGGCTGCGGTATTCATATTGCTTCTCTTTATAGTCTATATCTACTTAGTCATTATCTTTAACAAAAGAGCTGACAGATCCGACAAGGAAGAGTTGTTAGAGACTGTGGAGACCGAAGCACCGGTTTTCAGTTATAGTGAAGATGGCGGTGACAAAGAATGTGTGATTTGCCTTTGCCAAATTGAAAAAGAGGAGAAGTGCAGGAGGATGAACACGTGCAATCACGTGTTTCATAAGGATTGTATTGACCAATGGTTTATGGTTGAGCACCACTGTCCTCTTTGTCGAACTGTCATTTGTGTGGTGGTTGATAGTGATGGAAATACCGTGGATTCTTCTCCTATACTCCCATTTGATAGGAATTATTACAATTTTTTAGGATCTGTTTGGTAG MPLPIFSAFPTIFPASIPSIPSPSPPWSPSWSLLEVYPYEYLAAVFILLLFIVYIYLVIIFNKRADRSDKEELLETVETEAPVFSYSEDGGDKECVICLCQIEKEEKCRRMNTCNHVFHKDCIDQWFMVEHHCPLCRTVICVVVDSDGNTVDSSPILPFDRNYYNFLGSVW
BLAST of Bhi08G000523 vs. Swiss-Prot
Match: sp|Q9P7E1|YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-11 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Bhi08G000523 vs. Swiss-Prot
Match: sp|O64763|ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-11 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of Bhi08G000523 vs. Swiss-Prot
Match: sp|Q8W571|ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3) HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11 Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 0
BLAST of Bhi08G000523 vs. Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11 Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of Bhi08G000523 vs. Swiss-Prot
Match: sp|O64762|ATL38_ARATH (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.9e-11 Identity = 35/103 (33.98%), Postives = 47/103 (45.63%), Query Frame = 0
BLAST of Bhi08G000523 vs. TAIR10
Match: AT2G35000.1 (RING/U-box superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of Bhi08G000523 vs. TAIR10
Match: AT4G40070.1 (RING/U-box superfamily protein) HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12 Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 0
BLAST of Bhi08G000523 vs. TAIR10
Match: AT1G23980.1 (RING/U-box superfamily protein) HSP 1 Score: 68.9 bits (167), Expect = 3.4e-12 Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of Bhi08G000523 vs. TAIR10
Match: AT2G34990.1 (RING/U-box superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 4.4e-12 Identity = 35/103 (33.98%), Postives = 47/103 (45.63%), Query Frame = 0
BLAST of Bhi08G000523 vs. TAIR10
Match: AT4G30400.1 (RING/U-box superfamily protein) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11 Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of Bhi08G000523 vs. TrEMBL
Match: tr|A0A0A0K790|A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.9e-27 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Bhi08G000523 vs. TrEMBL
Match: tr|A0A1S3C5E4|A0A1S3C5E4_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26 Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 0
BLAST of Bhi08G000523 vs. TrEMBL
Match: tr|A0A0A0LUU6|A0A0A0LUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Bhi08G000523 vs. TrEMBL
Match: tr|A0A1S3C6H2|A0A1S3C6H2_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.2e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Bhi08G000523 vs. TrEMBL
Match: tr|A0A0A0LY10|A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.2e-26 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Bhi08G000523 vs. NCBI nr
Match: XP_011659858.1 (PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 9.5e-29 Identity = 60/98 (61.22%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of Bhi08G000523 vs. NCBI nr
Match: KGN44779.1 (hypothetical protein Csa_7G387140 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 8.8e-27 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Bhi08G000523 vs. NCBI nr
Match: XP_011659772.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 8.8e-27 Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Bhi08G000523 vs. NCBI nr
Match: XP_008457568.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]) HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26 Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 0
BLAST of Bhi08G000523 vs. NCBI nr
Match: KGN65715.1 (hypothetical protein Csa_1G512470 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |