Bhi08G000115 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000115
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Myb/SANT-like domain containing protein
Location	chr8 : 5216970 .. 5217221 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTCAGTTGCCAGCGTCGCACCGAAGCTTGATGGACTAGTTGATGTGTTATGTACGGATCGAGAGATGGCAAAGATGCAAGATTGGTTGGCACATGAACTGAAGACCATCCATGGTATCATAGTGCAACAATGTTTCAAGGTGGCCAATATATTTGGGAAAGAGACTCACATGTTGCGGATTTTCTTTGCATTGGATGGGATGGATAGGATAGCATATGTGACAGACACATTGGATAACTATTAA

mRNA sequence

ATGGCAGTTTCAGTTGCCAGCGTCGCACCGAAGCTTGATGGACTAGTTGATGTGTTATGTACGGATCGAGAGATGGCAAAGATGCAAGATTGGTTGGCACATGAACTGAAGACCATCCATGGTATCATAGTGCAACAATGTTTCAAGGTGGCCAATATATTTGGGAAAGAGACTCACATGTTGCGGATTTTCTTTGCATTGGATGGGATGGATAGGATAGCATATGTGACAGACACATTGGATAACTATTAA

Coding sequence (CDS)

ATGGCAGTTTCAGTTGCCAGCGTCGCACCGAAGCTTGATGGACTAGTTGATGTGTTATGTACGGATCGAGAGATGGCAAAGATGCAAGATTGGTTGGCACATGAACTGAAGACCATCCATGGTATCATAGTGCAACAATGTTTCAAGGTGGCCAATATATTTGGGAAAGAGACTCACATGTTGCGGATTTTCTTTGCATTGGATGGGATGGATAGGATAGCATATGTGACAGACACATTGGATAACTATTAA

Protein sequence

MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHMLRIFFALDGMDRIAYVTDTLDNY

Homology

[Close]

BLAST of Bhi08G000115 vs. TrEMBL
Match: tr|A0A251N4V5|A0A251N4V5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G013000 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ NI  KE  +
Sbjct: 264 MAEAVAGMAPQLAGLVNVLSTEKDLANMQAKLGGELRKIEFLTPLQVFRITNILAKEHDL 323

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 324 LRVFFTMTDEEKKDYVFNLMEH 345

[Close]

BLAST of Bhi08G000115 vs. TrEMBL
Match: tr|M5VQY4|M5VQY4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa018564mg PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ NI  KE  +
Sbjct: 503 MAEAVAGMAPQLAGLVNVLSTEKDLANMQAKLGGELRKIEFLTPLQVFRITNILAKEHDL 562

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 563 LRVFFTMTDEEKKDYVFNLMEH 584

[Close]

BLAST of Bhi08G000115 vs. TrEMBL
Match: tr|M5WDE8|M5WDE8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa014600mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-07
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ NI  KE  +
Sbjct: 608 MAEAVAGMAPQLAGLVNVLSTEKDLADMQANLGGELRKIEFLTPLQVFRITNILAKEHDL 667

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 668 LRVFFTMTDEEKKDYVFNLMEH 689

[Close]

BLAST of Bhi08G000115 vs. TrEMBL
Match: tr|A0A2P6P7B4|A0A2P6P7B4_ROSCH (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0199171 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-05
Identity = 27/82 (32.93%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           M+ +V++++ K+D LV++   D+E+A++Q  L  EL  I G+   Q F+  NI  ++  +
Sbjct: 240 MSKNVSTMSSKIDALVNIFSIDKEVAELQAKLDSELNKIDGLTEFQVFRATNILARQHDL 299

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +    +  YVT  L++
Sbjct: 300 LRVFFGMSEERKQTYVTYLLEH 321

[Close]

BLAST of Bhi08G000115 vs. TrEMBL
Match: tr|A0A2P5A9M4|A0A2P5A9M4_PARAD (Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_354480 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-05
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           M+ S+A++  K++GL  V   +RE+A MQ  L  EL  I G+   Q F+  NI   +  +
Sbjct: 307 MSASIATMKQKIEGLTKVWSNNREVADMQSKLDKELTQIEGLTELQVFRATNILATKHDL 366

Query: 61  LRIFFALDGMDRIAYVTDTLD 82
           LR+FF++    + AYV + L+
Sbjct: 367 LRVFFSMSKERKRAYVFNLLE 387

[Close]

BLAST of Bhi08G000115 vs. NCBI nr
Match: ONH94381.1 (hypothetical protein PRUPE_7G013000 [Prunus persica])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ NI  KE  +
Sbjct: 264 MAEAVAGMAPQLAGLVNVLSTEKDLANMQAKLGGELRKIEFLTPLQVFRITNILAKEHDL 323

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 324 LRVFFTMTDEEKKDYVFNLMEH 345

[Close]

BLAST of Bhi08G000115 vs. NCBI nr
Match: XP_020419690.1 (uncharacterized protein LOC18776125 isoform X1 [Prunus persica])

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ NI  KE  +
Sbjct: 264 MAEAVAGMAPQLAGLVNVLSTEKDLADMQANLGGELRKIEFLTPLQVFRITNILAKEHDL 323

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 324 LRVFFTMTDEEKKDYVFNLMEH 345

[Close]

BLAST of Bhi08G000115 vs. NCBI nr
Match: PQQ18955.1 (hypothetical protein Pyn_22532 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA +VA +AP+L GLV+VL T++++A MQ  L  EL+ I  +   Q F++ N+  KE  +
Sbjct: 81  MAEAVAGMAPQLAGLVNVLSTEKDLADMQAKLGGELRKIEFLSPLQVFRITNVLAKEHDL 140

Query: 61  LRIFFALDGMDRIAYVTDTLDN 83
           LR+FF +   ++  YV + +++
Sbjct: 141 LRVFFTMTDEEKKDYVFNLMEH 162

[Close]

BLAST of Bhi08G000115 vs. NCBI nr
Match: XP_011460763.1 (PREDICTED: uncharacterized protein LOC105350434 [Fragaria vesca subsp. vesca])

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1   MAVSVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHM 60
           MA  VA +APKLDGLV+VL TD++++++Q  L  EL  ++ +   Q F V NI  ++  +
Sbjct: 239 MAKVVAGMAPKLDGLVNVLSTDKDLSELQSKLDGELSKMNFLTPVQVFHVTNILAQKHDL 298

Query: 61  LRIFFALDGMDRIAYV 77
           LR+FF +    + +YV
Sbjct: 299 LRVFFTMTDERKESYV 314

[Close]

BLAST of Bhi08G000115 vs. NCBI nr
Match: XP_024156095.1 (uncharacterized protein LOC112164088 [Rosa chinensis])

HSP 1 Score: 59.3 bits (142), Expect = 7.1e-06
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 4   SVASVAPKLDGLVDVLCTDREMAKMQDWLAHELKTIHGIIVQQCFKVANIFGKETHMLRI 63
           +VA +APK +GL++VL TD+++A MQ  L  EL+ +  +   Q F V N   KE  +LR+
Sbjct: 263 AVAGMAPKFEGLINVLSTDKDLADMQGKLGGELRKMDFLSPLQVFHVTNKLAKEHDLLRV 322

Query: 64  FFALDGMDRIAYVTDTL 81
           FF +   ++  Y+ + L
Sbjct: 323 FFTMTDKEKKDYIINLL 339

The following BLAST results are available for this feature:

BLAST of Bhi08G000115 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi08G000115 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi08G000115 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A251N4V5\|A0A251N4V5_PRUPE	1.1e-07	39.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G013000 PE=4 SV=1	[more]
tr\|M5VQY4\|M5VQY4_PRUPE	1.1e-07	39.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa018564mg PE=4 SV=1	[more]
tr\|M5WDE8\|M5WDE8_PRUPE	1.9e-07	39.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa014600mg PE=4 SV=1	[more]
tr\|A0A2P6P7B4\|A0A2P6P7B4_ROSCH	3.1e-05	32.93	Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A2P5A9M4\|A0A2P5A9M4_PARAD	4.0e-05	35.80	Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW...	[more]

BLAST of Bhi08G000115 vs. NCBI nr


Match Name	E-value	Identity	Description
ONH94381.1	1.7e-07	39.02	hypothetical protein PRUPE_7G013000 [Prunus persica]	[more]
XP_020419690.1	2.9e-07	39.02	uncharacterized protein LOC18776125 isoform X1 [Prunus persica]	[more]
PQQ18955.1	3.8e-07	37.80	hypothetical protein Pyn_22532 [Prunus yedoensis var. nudiflora]	[more]
XP_011460763.1	3.2e-06	40.79	PREDICTED: uncharacterized protein LOC105350434 [Fragaria vesca subsp. vesca]	[more]
XP_024156095.1	7.1e-06	37.66	uncharacterized protein LOC112164088 [Rosa chinensis]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000115	Bhi08M000115	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000115	Cucumber (Gy14) v1	cgywgoB422
Bhi08G000115	Cucumber (Gy14) v2	cgybwgoB046
Bhi08G000115	Cucurbita maxima (Rimu)	cmawgoB0220
Bhi08G000115	Cucurbita maxima (Rimu)	cmawgoB0267
Bhi08G000115	Cucurbita moschata (Rifu)	cmowgoB0214
Bhi08G000115	Cucurbita moschata (Rifu)	cmowgoB0259
Bhi08G000115	Cucurbita pepo (Zucchini)	cpewgoB0636
Bhi08G000115	Cucurbita pepo (Zucchini)	cpewgoB1056
Bhi08G000115	Wild cucumber (PI 183967)	cpiwgoB049
Bhi08G000115	Cucumber (Chinese Long) v3	cucwgoB051
Bhi08G000115	Cucumber (Chinese Long) v2	cuwgoB049
Bhi08G000115	Bottle gourd (USVL1VR-Ls)	lsiwgoB337
Bhi08G000115	Melon (DHL92) v3.6.1	medwgoB176
Bhi08G000115	Melon (DHL92) v3.5.1	mewgoB174
Bhi08G000115	Watermelon (Charleston Gray)	wcgwgoB243
Bhi08G000115	Watermelon (97103) v2	wgowmbB461
Bhi08G000115	Watermelon (97103) v1	wgowmB499
Bhi08G000115	Watermelon (97103) v1	wgowmB514
Bhi08G000115	Silver-seed gourd	carwgoB0216