Bhi08G000094 (gene) Wax gourd

Overview
NameBhi08G000094
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptionmediator of RNA polymerase II transcription subunit 21
Locationchr8 : 4373239 .. 4384958 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAATTTGAAAATGGAGGAAAATCAGGAATCCGGAGGAAAATAAGGAATCAGAGAACATATTAAAAAAAATAAAGGAAAGGAATCCCAAAACTGAAACGCCAGCGCCAGCCCCAGCCATCCGAAACTCAACCGAAGCTCAATCGCCAGTCGCCATTTCTACCATTTCTCAATCGAAGCCTCTTCATTTCTCCCCTGCTGGCTGCCATCTCCTTCTCCATTTCGAAGCTCAATCGCCAGTCCGCGCCTCGCCACGGCCAGCCATACGAAGCTCAAACGCACCTGCCATCTCTATTCTCCCCTCCATTTCGGTTCGATCTTGTCTTTCACTACCATTTTTAAGTCCACTTTACATTATCGTCCAGTCCTATTAGTTAAAGAGGTCTCCATTGTCTTTACTTTTCCTTTAATGTGATCTTCGTGTTGGTATTCAAATGTCTTAAATTTATAAAATTGTTAAATTTTAAATTTAAGAGCGAAGTGAGAGAGATGAGAAGGATTTGACAAAGCCAAAATAAAAAAGCACTAAAGCGAAATTCAAACTCCCACCTTAGCGAATTGTGTTCTTTTAATAGCAGTCTCTTAATTCAACTAAATTACTCTTGACATTGAAAATGTGGCAAGTACATTATCAAAATTCTTTGACATTTTTAAAACGTCAAATTCTATGATAGCGAGAAAAAAAATCTGAAAAGCTTTGTCAACCCCTTGGAAGTGGTTTGCTGATTTAATTGGAGTGATTATGTGTATTGTTTGCTGAATCATCCTTTGTATAATTCTTCTTAGGGATAAGGTGAAAGATGGACATAATTTCTCAACTGCAGGAACAAGTTAACGCAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTTATCTCCTAATTACCCCGAACCGCCATCTCACGAACCTACAGAGGACAGTGCAAATATCGCAGAGCAGCCCAAGCTCATGAGCGCTGCTCTGGTGAAAGCTGCTAAGCAGGTATGAATTATTTATTCTGTGGGATTGAAGTGTTTGCTCGATTCTTAATACTTCGGGGTGGGAATATGAATGGGTGATGGCCGCGCCTCTGGTTAATAACTTCTTCACGGGTTGAAAGTTGAAACATTAAGAAAAGTATTTGCTTTTTCCTTTTGGTGAAAATTTATGTTGCTATTTTTGTTTTCAAATGTCAGTATCCTAGATTAACTTTATATACATTCGGTCTATTGGATAAGTAACCGAGAATCTACTATCTGCTTGAATCACCCTTGTGTTGAGGTTGGAAGAGAGTAAAATATCAAGGGAGCAGATTTCCCGCTACTTGAGATGCGTACAAATTCTAATGCTATGATATATGATACAATCCATCAAAGGGAGCAAATTTGGTATTGGAAACTTCAATCTATTTTTGCCATCCAACGTCAGATACTACTTAGATAGCTATGGCGTTTCAGATCGCCAATAAAACGAAGTGCTGAGAATTTTTTTTAGTTATTCCTTGCTTTTAACTACCTTATGTATATTTAGCCCCACTTTAAGGAGCTCTCATGCATGTCGATATTTTGGAATCTACTATTCAAACTCTGTATTTGAGACAATGTTGCTGAGAGATTTGATTTTCATAAGTTTCCAACGACGGAGTTGAATGTAGCAATGAATTAAGGTTTGTTCTTTCGAACAATTTCTTTAAGGAATATAGAATTTACGTTTGGGAATCCTAGTGTGATAGTTGTAGGTAATAGAAATGTGTAAAAGTTTTTCAATTCTGGATATATTATTTATTAGCTTTCTCTGAGGAGTTGCAGGGAGTCGACTAAGGATTTCTCCTCCATCCACCTCTTTTTTTTCTGTCAAAAACATTGTTTTCGTTGGAGTGTGTGCTATTTTGTGGGGTTTGTGGGCCAGATAAATAATAGGGATCTTCAAGGGGAGAAATAATAGAATCTTGGGATCTTGGTGTTAGTTTTTTTGGAATTTCTTGCTTAGTCACGTTTCACTGAATTGAAGACCCTTCTTATAGTTAGTTCACCTTTTTGTGGGCGTAACATTCTTGTATGTCCGTGTATTCTTTCATCTTTTTTCAACAAAAGTCTAGTTTTTCATCCAAAAATAAAATTTATTAGCATTTTGAACTAAAGAAAGGGTTGGGATCTTGCTTCATTTATATGCAATCCAATTGAATATGTGTACCTTTTTGACAAAAAATTTATTGTTATTATTTTCTGGCACAGTTTGATGCATTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAGTTGAAAAGAATCGCAGAACTACAAGTATGAATCTTCTCATATTCTGATGTTGATATACGACCAAGAATTCTCGTGTTGTTTACTTCTCAGTATGTTGAAACTTGTTATCCATTCCAGGCTGAGAACGATGCCGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGGTGTTTGTTAATCTTTATATTTTCAACATCCCTAGATGGAAATTATGGGTCCACCATAATTTCAAAAGCATAGCAAAAAAACAAGAAGTTTCTATTTTGGATTGTTACTGTCATATGATTCTATTTCATAAGTCGACTGAATCATTGTTTGGCTTGTGACTTACAATGATTCAAATAGTTTTATTTAATAATTTAAGTCCTAAATTTATCATGTTCACTCCATTCTATTGAATATACTGATACTATGCCTAACTAACAATCTTACTTAAACTGTCTGTTGTAGAGAGAGAATTAATACAAGTTCAGGAGCTGTTCAGCCAAGTGGCAGATAATTGCTTGAACTTGAAGAAAGCAGATTGAAAGAGTTAGGGAATTTTCCTACACTAACAATACCAATGTATGAATATTTTCCATATCTCCCTCATTCATTTTCCGCCATATGGCTCTTTGTTTTTATATTTAATACATGTAGAAGTACATGCAGCTCTACAGTTTAGGCAAGAAAAATAGTTCTATGACTCTATCGATATCTTATTTTAAAAAGGAAAAAAGTTATTCTATTTTTTTTTCTTTTTCCTTTTTTGTTTTTTTTTTTTGTCTTGCGTTGTTATTACTTTGGATTTTATTCAATGATATACCAAAGAAATAGTATATTGGTGATATATGAGGATAAAAGAGAAGTTACCTAAAATATTTAAATATTCATAAAAAAGTTTTAATTATTTTCCAAAATCATAATTCTGTTGTACGGGATATATTTCTGAGCAAATTGAAAACACATATGTTACTTTTTATTTATAGATTTACTTCTTCTAGGGGCTGTTTAGACTCTCAACTTGAAGTTAGCACACTCTATGTTTGGGACTCTAAATATAATAATGTTGATGCTAATCATTCTCTCTCTCTTTGGTACAATGTTTATTATATTATCTAAACTAAAATTGTTTGCATTTTTAACACACCTTATTATAGTGCATAGACTATAATATCCATGAATTATAATAACCAACGAAGTGTCTCAAACGTTCCTTAGTGTTTAAAATTTAGATAATTGTATTAGTCTATGGCTTTTTTTTTCTACTTGTTTTTATGTGTAACTTTTGTTGATTGAAACTTCAGTAGAAGTGATGGAACTTTTTATTAGTCTCTCATTGCCCAAATACACAAACTAATGGAGTTTATACAGAGAGCCAAATACATGTTTAAGCTCTAACATATAACAAAAATTTTCAACTAGCTGGGCTTGATCTTCAATGAGCTTCCTTAACATCCCCCCTCAAGCCAATGGTCTGTGCAGACAAAACATTAAGCTTGAAACGTAATCTTTTAAAATTTGCAGCTGAAAGAGCTTTTGTAAGAATATCTGCAACTTGAGCAAAAGCTGGTGGATGTCTAACGCCAATTTCTTTGCCAAGACAAGATCTCTGATGAAGTATGTCTAACTCCACATGTTTGGTTCTTGAATGCAAAACAGGATTAGCTCTAAGATCTACAGCGCTCAAGTTGTTTGATCAATAGGAATTTTCAGCTCGGTAAACAAAGAATTTAGCCATAGAATCTCAGTAGTTGCAATAGTCATTGAGCAATATTCTGCTTCAGTGCTCAAACGATAAATAATAGACTGTTTCCTAGACCCCAAACTGGATTTTCACCAACAAATATACAGAATCCAGAGGTTGATTTATGATCTTCTGGGATCGATGCCCAGTCAGCACCGGAAAAACCAGTAATATTAAGATGAGTTGATTTATTTAGCAAGAATCCAAAATCACAAGTTCCTTTAAGGTATCTCAATATTCTTTTCACAAGTTGCCAATGGATTAAGGTTGGAGTCTGCATAAAGTGGCAAGCTTTGTTTACACAAAAAGATATTTCAGGTCTAATGAGTGTAACATACTGGACTGCCCACCCCAACAATACTCCTATAAAGCAAAGGATTGCTTTGCAGACACAAAGTAGTTACTGATCATAGGTGTTGCAATTGGATTTGCTTCCATCATTTGTGCTCGATGATCGTAAATATATTTTTGTTGAGACAGAAAAAGACCTCCAGATGATGGATAGGATACTTCTATGCCCAAAAAATGTCAATTTTCCAATATCCTTCAGAGAAAAATTGACAAAAGTAAAGAAATGAGTTCTTCAATCATGGAATTCGAGTTTCCTGCTATTACTATATCATTTACATATATCAGTATGAAGCATCTGTTTAGTGAATCTGAACAGCAAAGACGGATCAGCCCTTGAGCATATAAAACCTAATGAACACAAGAAAGAGGTTAGTCGATCATACCATGCTCTAAGAGCTTGCTTGAGGCCATATAATGCCTTTTTGAGTTTATACTCATGAGAGGTATTGGTAGAAGAGATAAAACCAGTTGGTTGCTCCATAAAAACATCTATTGATAACAAGTCGTGTAGAAAAGCATTGTTGATATCAATTTGTCTAACAGTCCAGCCTTTTGATATGGCAAAAGTAAAGAGTGCTCTGATTGTAACAAATTTTACTACTGGACTAAAAGTTTCACTATAATTGATATCAGCTTCCTTGCCACTAGGCCTACCTTGTATCGAGAGATTGAACCATCAGTATCTTGCTTGATTTTGAAGACCCATTTGCAATCAATTATCTTTTGTTCTTTAGACTGAGGTACCAACTCCCATGTGTTGTTAGTAAAGCATTATACTCTTCCTCGATTGCCTTTCGCCACTAAGGATGTTTGAGAGCTTCTTTAGCTGTAGGTGGTTCATTTTCTGAATAATCAGTTGGAAAAACTTTTGGCTCAAATATACCATTCTTTGATCATGTGACCATCGGATGTGAGGACCTAGGCCCATGAGTATTGATATTATTTCTTTGAGAGTCAGAACTAGATGAAGGCAATTCATCTTCAGTGTTATCAGTAGTAGTACTAGTACAATCCTGTATATCATTGGCACAAACAGCAGGTATTCCACAGATATAATTACTGCAAATAGTATTATCACATCCAGCAGGTGTATCTTCTTCTGAAGGTGAAGGATCAACACAATTCGGTGCTAATAGGTCAGTTGGTATACCATTTTGATCAGAAGAAGAGGAGATAGTGTTAGGGTTAATAGGTGTAGGTGAAGATCATGATGGAATTGAAGAAAATATGGGTGGGGCTGGAAGTAATGTGAATTTATTATTTTCAGTAAGATCTGTGCAAAATGGTACTTTTGGTTTGTTTTTGGGAAAAAGGAAAAGTATTTTCATCAAATTTGACATTTCTTGATATGTATAATCTCCCATCACTCATATCCTTCGAGTATATTACTGTATCAAGAAAAGTACAGGGTAATGACCGAAAATTTAATTTATGATCGTAGTAGGGTCTAAGACAAGGAAAACAAAGACAATCAAAGATTTTCAAGGAAGAATAGTCAGGCTTTTTATTGAGTAGGATTTGAAGAGGAGACAAGTCATGAAGGGTTGAAGTAGAAAGCCGATTAACAAGGTAAACAGCCATGGAAAATGTCTCATCCAAATATTTTAAGGGAATACTCGATTGAGAAAGAAGGGTGATACCAATATCTACAATAATATGGCAGTGTTTATTTTTGGCAATGTCGTTCTGTTGAGAAGTATATGTGAACGGGAACTTATGTTCAATTCCCTAAGAGTTAAGAAAAGGAATAAAAGTTTTGAATTCGACTCCCCCATTAGATTGGAAATGCAAAATGGATAAGCCAATAAGTTTTCCAATGTATACTTTGAAAAATCTGAAAAGTAAAAATGCCTTCAGATTTGTTTTTAAGAAAGTAGATCCAGGTAAAACGAGAATAGACATCTATAAAGCTGATGTAATATTTAAAACTATTCTTAGAAGTTTAATGAGATGGTCCCCAAAGATCAGCAATAAATTGTAGTGGTGCAGTGTAGCGTGTTAGAGGAGGAAAAAGGAAGATAATGACTTGCCAATTGCACAAGCTTGACAGAAGTAAAAAGTTTTATTGTACTCTGCTTTGCTGTTCGTTTTACAATAGGTAATGAAGGATGTCCAAATCTTCTATGTGGTATATCAAAAGAAGATGAAGAAGTACAATTGTTAATAGGTTCACAAGAAAATGCAAAAGACTGGATTTTAGGACAGGAATTTGTGTATTGGTTTGAGTCTTCATCTTAGAATATGAGAGAGGCTTTTCCACTTGAAAAGAGTATAAACCGTGATGAATTGTTCCTTGAAGAAGAATTGTTCCAGTTGCTCGATTTCTTCACAAGACAATAAAATGGATGAAATTCAAAATAGACATTATTGTCTTTATTGAATTGGTCAAAGCCTATAAGATTTTTAGTGACAAAGGGAATGTGAAGTAAGTTTACGAAAAATATGATTTGATTTGGTAAGTGAAGTATAAACAAAATGGGAAATGGACACACGTGAACCATTAGCAACTTGAACTTGTCCTCCAGTAGCTTCTGTGCTCATTGTCAAATTATTTAGATCATGAGTAATATGGTTTGTAGTTCCTGAATCAGGATACGAATATGTATCCTTATTGATATCATTTGATGAAGTCCAGAAAGCTGTTGAGTTTGAGACATTAGTCGGACCAGAGTACTGCATTGGAACATGAAAATAACATTTCGATGTTGTGTCCAAATTTATTGCATATTTGACATTGGACTTTATTTGATTTCCCCAGTTTTTATTTCCTCCTTTTCCAGAATTTCCTCCCTTATTTCTATTGTCAGAATACTGTTGATTATTTTGGTTGAAAGTTCTGTTTGCATCATTTAACGACTTTCCAAAATTTTTGCTACAAGCAAGATTTACAGAGGGAAGATGAGGACTATTTTGAAGAGATCTTTCGTTTTTCAATAGACTTTCTTGAGAAAGTAGAGACGTAACTTCTTGAATATCCATGGATTTCTTTTGAGATGTTATAATAGATACTACAGAATCATAGTTTGTTCCTAATCCAGATAAAATGTGCAATGGATGATCTTCAGTGGTTATAGTTATACCTGAAGCATTAAGCATATCAACAAAGGTTTTCAACTTCCGTAGATAATATTTCAAGGGCTGATCTTTTCAAAGATTCTACAGTTCAATTTGTATATGCATTATTTTCGCCATGCTCTTCATAGCAAACATTTCTTGAAAGATTAGACCAAATCTCTTTTGTTGTACAGTGAAGCAGATCTCCCAAGATTTCTTCGCTTATAGAACCAAGAATCCATGAAAAGATTAATCGATCTTGTCTCTTCCACTGTTGATAGGCTGAATTTTCTTTCTATACTTTTGTTGTTCCTTGTACGATTTTCAGAATTTTATCCGGAGCGGAGTTTTCAGCATACAAATGATCTTCAAGACCATTTCCTTCTGGGGTAGCAACTACTCGTAGTCTCCATAGGAGAAAATGTGCAACTTAGCTTTACAATGCAAATTTGGTTACCTGGGTTTATGATTTGAAAACCTTGATTTGTAATTTCAAATCCATCTTCTATATTTGAAATAGTCATGATTCTTGATCTTCAGAATGAGAGAAAAAATCGTGGGTATCGCTTGACAATCTTTGGTACCAAGTAAAACTTTAGTAGAAGTGGTGAAATTTTTTATTAATCTCTTATTGCCCTAATACACAAACTAATGGAGTTTATATAGAAAGGATTTTTTGTACGGATGACCTCATTTGGGAGGCCCAAATGAAAAATATCCACCTGTAGAAAAGTAATGGAAAGTGGCCTCCTGCTGATGTCATCCACGCGTGATTTTACCACTTGAATATTTTTGCGGATGACTTCTTTTGGGAGTCCAAATGAAAAATGGCCCAAGGTTCAAATTTGCTCAAAAAATGGCCTTTTGCTTACGTCAGCCTTGTGTAGCAACCTTGTGTGCAAGTACTACTTTGTCCTTGGAACAAGTGTGAGGGCTTGTGATCCCACGAACTCTCATTCCTTCCTCTTGCCTTGGACTTCTTCCTCGTGTTATTGTCAGACACAACTTGACTGTTTTAAATGAATTTTAAACATCAGGAAAAAAAATAAACACTTCTTCCTCTTGCACGGATTTCTCTCTTTCGTTTCTTCTACTACTCTCTCTCTCTTGAATTTCTCCCTCTCGTTTCTTCTTCCACTCTCTCATTTTTTCTTGTTTCTTCTTCTACTTCGAAATTCTTCATCTTTAATGCTACCTAACAATACACATTCAATGGATTTCTCGTTTCTTCCTCTATTTCGAAATAGTTGACTTTCTAAACACTCAAATTCCTCTTCATTGATACGGATGTTTTCTTTTTTGGTTTTCGTTTCAAGTGCATGTTAGGGTTTTCATTTGATATTTGTAAGAGAATAATCGAGAGGAAGAGAATCAACCATAGGGGGACATCGAAACATGAGGAAGAATTGAGAGGAAGAAACGAGAGAATTGAGTGGAAGAAATTCAAGAGAATCGAGAGAAAGGAACAAGAGAGAAAAATGAGAAAGAAACAAGAGGAGGAATAGAGAGAAAGAAATGAGATTTTGTTAGAAGTGCCTATACTGTATTTTTTTCTATTTTATCTCTATGTTTTTTTTTAGATGCAGCAATAGATAGCTAATCTAAAGATTTCTGTTGGAGACCATTTTCCTGGCCAAGTTACGAGTATATCACCTCACATTGGGATTGCAAATAAGATAGTCAAAGAAGAGCTTGCAGAGAGGCAACTTGAGTTATTCAGGAGGATCATGTTTGGAAGATTGGTGGATATGGACATTGCCTTCAACAACCCGCTAGTCCATTATATCTTATTGATAGAGTCCCCAACAAAAGGGGTATTGGGTTCAGGAGAGGATTGCAGAGTTCGGGCTTCAATATGGTTGTGAACTATGAGCTAATAGATTCTTTTACTAGTCTATACTATATCGTAGTTGTATTTTGTTATGTATATCATACATGTTTTTTGTTATATACTTTGTACAAACTGTGAATAGTTCAATGAAGCAAATTGTTTGTGACATTTCAATTTAAATTTTGATGATGCAAGTGTACAACACATGAAAATAGTTTTAAAATTAACTGTCGTTACTGTGTACAATAAACAAGAGAAAGAAACGAAATGAACAAATGAGAAGAAGAAACAAGAGCCAAACAACGATCGAGTCAACTTATGAAATGAAACCATACGGATGTAACAATCTAAAATATGAACCTTTTTTTTGGTATGCTTTGGAAATCATGGTGGACCAACAATTTGCATCTAGAGATGTTGAAAATATAAAGATTAACAAGAAGACGAGATAACACATGCTGCTTGTGGCTGCTTTTGAAATTCTTGACCTACATCATCGTTCTCAGCCTAGAATGGATACTAGTGACAAGGTATTGAGAAGTAAACAACACAAGAATTCTTGCTCTTATATCAACATCAGAATATGAGAAGATTCATACCTATAGTTCTGCAATCCTTTTCAACTGCTCTTCTTCACATCCATCAGGTAGAGGCAATGCTGCAACCAATTCATCGAACTATGCCAGAAAAGAATAACAATTAATATATTTTTTAAAAAAGGTACACATGTTCAATTGGATTGCACAGCTGAATCATCTTTTTGATTGCAACAGCATTGAAGTAATTTGTTTATCCATGATAAATCCGGCATTCTCTGCTTCCTTGTAAATTTCTTTACACTTGGCTAACCTCCCTGAAACTAAATAAATGGTGATCATTTTCCTATATACATCATATGTAGGGGCAAAACCAGCTTCCTTAAGCTTTGCAAAATATCTAACAGCCCTTGAAAGATCACCAAGAGTAACAAAAAGCTTTATCATTACACTATAAGCAGGAAGATCAAAAGGACAATTTGCAGCCTCCATTTCCCACACTAAAGATAATGCCTCCCTGTATTTCCTGTCTGAGTAGCGGCTATGAACTAAGGCAGTATACATAACCACACTAGGTTCGTGTCCAGATTCAACATACCAGCTATAAAGTTTCTCAGCAATTTCAAATTTACCAAGCCTTGTGCAGACCTTAATTATAGTTGTAGTATCTTGCTGGTTTAACGTCAAGGCTTCTCTTTGTCCTAGCTCATCCAGTAAGGTAAGAACCAACACGTTTTTATCAGGGTTTTTCCCAAGCTCCAATATCAACTTCACATAAACGCTAGGATCCAACAGTCTCTTACGCTTCTTTGCAGCTACAAGAAGCTTCCAAGCAAGATTTAAGCTCCCACCTTTAATAAACCCTCTCACCATTGCCTCGAGCACACCACGACTAGCAAGTTTAGTGAACTCTTCCAAGTCTAGAGGTACCTTCAGTTCATGGTTCCTTGCAAGGACCTCAACGGTTGAGGCCAAAACACGATCATCCGGAAAGAGTCGAGGTTGTTCCTGCGCCCAAGAAAACGTCTTTAGAGCTCTATCAGGAAGACCCATATGACCCAGTTCCTTAATCGTCAATGACAAAGAGCCCTTCTGCAAAAAAGGACCCCAACGGTTGAGAACCTTGGACACATTTTCCTCCGGGGACAAATCTCTAATCGCCCTGGCAAGGCCAATAAGAAAGTCAGGACGCTTGTAGACTTGCTTAGACAGCAAAGCACGCGAAGAAACCATTATTCTTGGGCGGATTTTAGGGTCAGGAAGCCCTGATGGTCGTAGCTTGTGAGGAAGTGGGAGAGGAAGAGGTCTATCTCGGTTCAATTTACCGGGTTTCTGAGGAATTCTCCCTTGGAAGAGTGATGAAATGGCTTCAATTTCATCTGAATCCCAAACAACATCAGTATCCTTATAGTCATAAGCGTGGATTTCTTCATGCTCATCGTCTTCACCTTTAGGGAGTTGGAAAATCTCAGAGGAAATCAAATCAGTTAAGGATGGGGAAGGGGCAGAGGTTTTGTTCTTCAAGAATTGGTTGACAGCGGGGTCAGGAGGAAGCTTGGCCCGTCGTGGACAGAGGAGGTTTTTGGGTAGGCGTCTTCTAGAGTTGGTCTTGAAATGAGCCATCGTAGCCTGGCAGCCAATTCCTCCATTTCCTTTCACCAGAATGGAAGAGACAGAAGTTGCTGAGAAAATGGAATCCATAAATCCAAGCTAGAAGCTTTGAAGGTGTTTTACAATAGATGAAAAGGAGAAGAAAAACGTTGGTTGGGGAAGAGGAACGATCGTTCGGTGCTATCTTTTATTTCTTTCATTCGCAAGGGTTGATGATTAATTGGGCCGCACCGATTAATCGAGGCTCTTGTCTGATG

mRNA sequence

CTCAAATTTGAAAATGGAGGAAAATCAGGAATCCGGAGGAAAATAAGGAATCAGAGAACATATTAAAAAAAATAAAGGAAAGGAATCCCAAAACTGAAACGCCAGCGCCAGCCCCAGCCATCCGAAACTCAACCGAAGCTCAATCGCCAGTCGCCATTTCTACCATTTCTCAATCGAAGCCTCTTCATTTCTCCCCTGCTGGCTGCCATCTCCTTCTCCATTTCGAAGCTCAATCGCCAGTCCGCGCCTCGCCACGGCCAGCCATACGAAGCTCAAACGCACCTGCCATCTCTATTCTCCCCTCCATTTCGGGATAAGGTGAAAGATGGACATAATTTCTCAACTGCAGGAACAAGTTAACGCAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTTATCTCCTAATTACCCCGAACCGCCATCTCACGAACCTACAGAGGACAGTGCAAATATCGCAGAGCAGCCCAAGCTCATGAGCGCTGCTCTGGTGAAAGCTGCTAAGCAGTTTGATGCATTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAGTTGAAAAGAATCGCAGAACTACAAGCTGAGAACGATGCCGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGAGAGAGAATTAATACAAGTTCAGGAGCTGTTCAGCCAAGTGGCAGATAATTGCTTGAACTTGAAGAAAGCAGATTGAAAGAGTTAGGGAATTTTCCTACACTAACAATACCAATAATTTTATCCGGAGCGGAGTTTTCAGCATACAAATGATCTTCAAGACCATTTCCTTCTGGGGTAGCAACTACTCGTAGTCTCCATAGGAGAAAATGTGCAACTTAGCTTTACAATGCAAATTTGGTTACCTGGGTTTATGATTTGAAAACCTTGATTTGTAATTTCAAATCCATCTTCTATATTTGAAATAGTCATGATTCTTGATCTTCAGAATGAGAGAAAAAATCGTGGGTATCGCTTGACAATCTTTGGTACCAAGTAAAACTTTAGTAGAAGTGGTGAAATTTTTTATTAATCTCTTATTGCCCTAATACACAAACTAATGGAGTTTATATAGAAAGGATTTTTTGTACGGATGACCTCATTTGGGAGGCCCAAATGAAAAATATCCACCTGTAGAAAAGTAATGGAAAGTGGCCTCCTGCTGATGTCATCCACGCGTGATTTTACCACTTGAATATTTTTGCGGATGACTTCTTTTGGGAGTCCAAATGAAAAATGGCCCAAGGTTCAAATTTGCTCAAAAAATGGCCTTTTGCTTACGTCAGCCTTGTGTAGCAACCTTGTGTGCAAGTACTACTTTGTCCTTGGAACAAGTGTGAGGGCTTGTGATCCCACGAACTCTCATTCCTTCCTCTTGCCTTGGACTTCTTCCTCGTGTTATTGTCAGACACAACTTGACTGTTTTAAATGAATTTTAAACATCAGGAAAAAAAATAAACACTTCTTCCTCTTGCACGGATTTCTCTCTTTCGTTTCTTCTACTACTCTCTCTCTCTTGAATTTCTCCCTCTCGTTTCTTCTTCCACTCTCTCATTTTTTCTTGTTTCTTCTTCTACTTCGAAATTCTTCATCTTTAATGCTACCTAACAATACACATTCAATGGATTTCTCGTTTCTTCCTCTATTTCGAAATAGTTGACTTTCTAAACACTCAAATTCCTCTTCATTGATACGGATGTTTTCTTTTTTGGTTTTCGTTTCAAGTGCATGTTAGGGTTTTCATTTGATATTTGTAAGAGAATAATCGAGAGGAAGAGAATCAACCATAGGGGGACATCGAAACATGAGGAAGAATTGAGAGGAAGAAACGAGAGAATTGAGTGGAAGAAATTCAAGAGAATCGAGAGAAAGGAACAAGAGAGAAAAATGAGAAAGAAACAAGAGGAGGAATAGAGAGAAAGAAATGAGATTTTGTTAGAAGTGCCTATACTGTATTTTTTTCTATTTTATCTCTATGTTTTTTTTTAGATGCAGCAATAGATAGCTAATCTAAAGATTTCTGTTGGAGACCATTTTCCTGGCCAAGTTACGAGTATATCACCTCACATTGGGATTGCAAATAAGATAGTCAAAGAAGAGCTTGCAGAGAGGCAACTTGAGTTATTCAGGAGGATCATGTTTGGAAGATTGGTGGATATGGACATTGCCTTCAACAACCCGCTAGTCCATTATATCTTATTGATAGAGTCCCCAACAAAAGGGGTATTGGGTTCAGGAGAGGATTGCAGAGTTCGGGCTTCAATATGGTTGTGAACTATGAGCTAATAGATTCTTTTACTAGTCTATACTATATCGTAGTTGTATTTTGTTATGTATATCATACATGTTTTTTGTTATATACTTTGTACAAACTGTGAATAGTTCAATGAAGCAAATTGTTTGTGACATTTCAATTTAAATTTTGATGATGCAAGTGTACAACACATGAAAATAGTTTTAAAATTAACTGTCGTTACTGTGTACAATAAACAAGAGAAAGAAACGAAATGAACAAATGAGAAGAAGAAACAAGAGCCAAACAACGATCGAGTCAACTTATGAAATGAAACCATACGGATGTAACAATCTAAAATATGAACCTTTTTTTTGGTATGCTTTGGAAATCATGGTGGACCAACAATTTGCATCTAGAGATGTTGAAAATATAAAGATTAACAAGAAGACGAGATAACACATGCTGCTTGTGGCTGCTTTTGAAATTCTTGACCTACATCATCGTTCTCAGCCTAGAATGGATACTAGTGACAAGGTATTGAGAAGTAAACAACACAAGAATTCTTGCTCTTATATCAACATCAGAATATGAGAAGATTCATACCTATAGTTCTGCAATCCTTTTCAACTGCTCTTCTTCACATCCATCAGGTAGAGGCAATGCTGCAACCAATTCATCGAACTATGCCAGAAAAGAATAACAATTAATATATTTTTTAAAAAAGGTACACATGTTCAATTGGATTGCACAGCTGAATCATCTTTTTGATTGCAACAGCATTGAAGTAATTTGTTTATCCATGATAAATCCGGCATTCTCTGCTTCCTTGTAAATTTCTTTACACTTGGCTAACCTCCCTGAAACTAAATAAATGGTGATCATTTTCCTATATACATCATATGTAGGGGCAAAACCAGCTTCCTTAAGCTTTGCAAAATATCTAACAGCCCTTGAAAGATCACCAAGAGTAACAAAAAGCTTTATCATTACACTATAAGCAGGAAGATCAAAAGGACAATTTGCAGCCTCCATTTCCCACACTAAAGATAATGCCTCCCTGTATTTCCTGTCTGAGTAGCGGCTATGAACTAAGGCAGTATACATAACCACACTAGGTTCGTGTCCAGATTCAACATACCAGCTATAAAGTTTCTCAGCAATTTCAAATTTACCAAGCCTTGTGCAGACCTTAATTATAGTTGTAGTATCTTGCTGGTTTAACGTCAAGGCTTCTCTTTGTCCTAGCTCATCCAGTAAGGTAAGAACCAACACGTTTTTATCAGGGTTTTTCCCAAGCTCCAATATCAACTTCACATAAACGCTAGGATCCAACAGTCTCTTACGCTTCTTTGCAGCTACAAGAAGCTTCCAAGCAAGATTTAAGCTCCCACCTTTAATAAACCCTCTCACCATTGCCTCGAGCACACCACGACTAGCAAGTTTAGTGAACTCTTCCAAGTCTAGAGGTACCTTCAGTTCATGGTTCCTTGCAAGGACCTCAACGGTTGAGGCCAAAACACGATCATCCGGAAAGAGTCGAGGTTGTTCCTGCGCCCAAGAAAACGTCTTTAGAGCTCTATCAGGAAGACCCATATGACCCAGTTCCTTAATCGTCAATGACAAAGAGCCCTTCTGCAAAAAAGGACCCCAACGGTTGAGAACCTTGGACACATTTTCCTCCGGGGACAAATCTCTAATCGCCCTGGCAAGGCCAATAAGAAAGTCAGGACGCTTGTAGACTTGCTTAGACAGCAAAGCACGCGAAGAAACCATTATTCTTGGGCGGATTTTAGGGTCAGGAAGCCCTGATGGTCGTAGCTTGTGAGGAAGTGGGAGAGGAAGAGGTCTATCTCGGTTCAATTTACCGGGTTTCTGAGGAATTCTCCCTTGGAAGAGTGATGAAATGGCTTCAATTTCATCTGAATCCCAAACAACATCAGTATCCTTATAGTCATAAGCGTGGATTTCTTCATGCTCATCGTCTTCACCTTTAGGGAGTTGGAAAATCTCAGAGGAAATCAAATCAGTTAAGGATGGGGAAGGGGCAGAGGTTTTGTTCTTCAAGAATTGGTTGACAGCGGGGTCAGGAGGAAGCTTGGCCCGTCGTGGACAGAGGAGGTTTTTGGGTAGGCGTCTTCTAGAGTTGGTCTTGAAATGAGCCATCGTAGCCTGGCAGCCAATTCCTCCATTTCCTTTCACCAGAATGGAAGAGACAGAAGTTGCTGAGAAAATGGAATCCATAAATCCAAGCTAGAAGCTTTGAAGGTGTTTTACAATAGATGAAAAGGAGAAGAAAAACGTTGGTTGGGGAAGAGGAACGATCGTTCGGTGCTATCTTTTATTTCTTTCATTCGCAAGGGTTGATGATTAATTGGGCCGCACCGATTAATCGAGGCTCTTGTCTGATG

Coding sequence (CDS)

ATGGACATAATTTCTCAACTGCAGGAACAAGTTAACGCAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTTATCTCCTAATTACCCCGAACCGCCATCTCACGAACCTACAGAGGACAGTGCAAATATCGCAGAGCAGCCCAAGCTCATGAGCGCTGCTCTGGTGAAAGCTGCTAAGCAGTTTGATGCATTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAGTTGAAAAGAATCGCAGAACTACAAGCTGAGAACGATGCCGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGAGAGAGAATTAATACAAGTTCAGGAGCTGTTCAGCCAAGTGGCAGATAATTGCTTGAACTTGAAGAAAGCAGATTGA

Protein sequence

MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQVQELFSQVADNCLNLKKAD
Homology
[Close]
BLAST of Bhi08G000094 vs. Swiss-Prot
Match: sp|C0LU16|MED21_ARATH (Mediator of RNA polymerase II transcription subunit 21 OS=Arabidopsis thaliana OX=3702 GN=MED21 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-49
Identity = 107/139 (76.98%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKL 60
           MDIISQLQEQVN IAA+ FN FGTLQRDAPPV+LSPNYPEPP+    T+D+    EQPK 
Sbjct: 1   MDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFPEQPKQ 60

Query: 61  MSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQ 120
           +SA LVKAAKQFDALVAALPLS+GGE  QLKRIAELQ END VGQELQKQL+AAE+EL Q
Sbjct: 61  LSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQVENDLVGQELQKQLEAAEKELKQ 120

Query: 121 VQELFSQVADNCLNLKKAD 139
           VQELF Q ADNCLN+KK +
Sbjct: 121 VQELFGQAADNCLNMKKPE 139

[Close]
BLAST of Bhi08G000094 vs. Swiss-Prot
Match: sp|Q7ZTI5|MED21_DANRE (Mediator of RNA polymerase II transcription subunit 21 OS=Danio rerio OX=7955 GN=med21 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04
Identity = 37/139 (26.62%), Postives = 69/139 (49.64%), Query Frame = 0 

Query: 2   DIISQLQEQVNAIAALAFNTFGTLQRDAPP-----VRLSPNYPEPPSHEPTEDSANIAEQ 61
           D ++QLQ+ VN++A    N  G LQ+ APP     ++ + N  +P +  PTE+ A     
Sbjct: 3   DRLTQLQDAVNSLADQFCNAIGVLQQCAPPASFSNIQTAINKDQPSN--PTEEYA----- 62

Query: 62  PKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERE 121
            +L +A + + AK  D L+ +LP  +     Q   + +L+ EN      L++ +   +  
Sbjct: 63  -QLFAALIARTAKDVDVLIDSLPSEESTAALQAASLRQLEEENQEAAARLEEVVYRGDAL 122

Query: 122 LIQVQELFSQVADNCLNLK 136
           L ++Q   + +A + L  +
Sbjct: 123 LEKIQTALADIAQSQLRTR 133

[Close]
BLAST of Bhi08G000094 vs. TAIR10
Match: AT4G04780.1 (mediator 21)

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-51
Identity = 107/139 (76.98%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKL 60
           MDIISQLQEQVN IAA+ FN FGTLQRDAPPV+LSPNYPEPP+    T+D+    EQPK 
Sbjct: 1   MDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFPEQPKQ 60

Query: 61  MSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQ 120
           +SA LVKAAKQFDALVAALPLS+GGE  QLKRIAELQ END VGQELQKQL+AAE+EL Q
Sbjct: 61  LSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQVENDLVGQELQKQLEAAEKELKQ 120

Query: 121 VQELFSQVADNCLNLKKAD 139
           VQELF Q ADNCLN+KK +
Sbjct: 121 VQELFGQAADNCLNMKKPE 139

[Close]
BLAST of Bhi08G000094 vs. TrEMBL
Match: tr|A0A1S3BN38|A0A1S3BN38_CUCME (mediator of RNA polymerase II transcription subunit 21 OS=Cucumis melo OX=3656 GN=LOC103491637 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.7e-62
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPPS EPTEDSA IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDSATIAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAEND VGQELQKQLQAAE+EL+QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEQELVQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. TrEMBL
Match: tr|A0A0A0KZ00|A0A0A0KZ00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268030 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-62
Identity = 131/138 (94.93%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPPS EPTED+A IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAEND VGQELQKQLQAAE+EL+QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. TrEMBL
Match: tr|A0A2R6RBJ7|A0A2R6RBJ7_ACTCH (Mediator of RNA polymerase II transcription subunit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09759 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 122/138 (88.41%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQ N IAALAFNTFGTLQRDAPPVRLSPNYPEPP++ PTED+AN+AEQPKLM
Sbjct: 1   MDIISQLQEQANTIAALAFNTFGTLQRDAPPVRLSPNYPEPPAN-PTEDAANVAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFDALVAALPLS+GGE+ QLKRIAELQAENDAVGQELQ+QL+AAE+EL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSEGGEDAQLKRIAELQAENDAVGQELQRQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQ ADNCLNLKK D
Sbjct: 121 QELFSQAADNCLNLKKPD 137

[Close]
BLAST of Bhi08G000094 vs. TrEMBL
Match: tr|A0A1S4BT41|A0A1S4BT41_TOBAC (mediator of RNA polymerase II transcription subunit 21-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107811605 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP   PTED+AN+AEQPK M
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPANPTEDAANVAEQPKQM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAA VKAAKQFDALVAALPLSDGGEE QLKRIAELQAENDAVGQELQKQL+AAE+EL QV
Sbjct: 61  SAAFVKAAKQFDALVAALPLSDGGEEAQLKRIAELQAENDAVGQELQKQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELF+Q  DNCLNLKK +
Sbjct: 121 QELFNQATDNCLNLKKPE 138

[Close]
BLAST of Bhi08G000094 vs. TrEMBL
Match: tr|A0A1J6IVT0|A0A1J6IVT0_NICAT (Mediator of rna polymerase ii transcription subunit 21 OS=Nicotiana attenuata OX=49451 GN=MED21 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP   PTED+AN+AEQPK M
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPANPTEDAANVAEQPKQM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAA VKAAKQFDALVAALPLSDGGEE QLKRIAELQAENDAVGQELQKQL+AAE+EL QV
Sbjct: 61  SAAFVKAAKQFDALVAALPLSDGGEEAQLKRIAELQAENDAVGQELQKQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELF+Q  DNCLNLKK +
Sbjct: 121 QELFNQATDNCLNLKKPE 138

[Close]
BLAST of Bhi08G000094 vs. NCBI nr
Match: XP_008449895.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 4.0e-62
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPPS EPTEDSA IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDSATIAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAEND VGQELQKQLQAAE+EL+QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEQELVQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. NCBI nr
Match: XP_004149640.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis sativus] >KGN54019.1 hypothetical protein Csa_4G268030 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 6.8e-62
Identity = 131/138 (94.93%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPPS EPTED+A IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAEND VGQELQKQLQAAE+EL+QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. NCBI nr
Match: XP_022958635.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022958636.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022996209.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima] >XP_022996211.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 8.9e-62
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP HEPTEDSAN AEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDSANFAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQL+AAE+EL QV
Sbjct: 61  SAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. NCBI nr
Match: XP_022153730.1 (mediator of RNA polymerase II transcription subunit 21 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 5.8e-61
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLS NYPEPPS EPTEDSANIAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQL+AAE+EL QV
Sbjct: 61  SAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

[Close]
BLAST of Bhi08G000094 vs. NCBI nr
Match: XP_023532119.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 5.8e-61
Identity = 129/138 (93.48%), Postives = 132/138 (95.65%), Query Frame = 0 

Query: 1   MDIISQLQEQVNAIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLM 60
           MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP HEPT+DSAN  EQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTDDSANFVEQPKLM 60

Query: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLQAAERELIQV 120
           SAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQL+AAE+EL QV
Sbjct: 61  SAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLEAAEKELKQV 120

Query: 121 QELFSQVADNCLNLKKAD 139
           QELFSQVADNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138

The following BLAST results are available for this feature:
BLAST of Bhi08G000094 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|C0LU16|MED21_ARATH1.2e-4976.98Mediator of RNA polymerase II transcription subunit 21 OS=Arabidopsis thaliana O... [more]
sp|Q7ZTI5|MED21_DANRE4.4e-0426.62Mediator of RNA polymerase II transcription subunit 21 OS=Danio rerio OX=7955 GN... [more]
BLAST of Bhi08G000094 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G04780.16.6e-5176.98mediator 21[more]
BLAST of Bhi08G000094 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BN38|A0A1S3BN38_CUCME2.7e-6295.65mediator of RNA polymerase II transcription subunit 21 OS=Cucumis melo OX=3656 G... [more]
tr|A0A0A0KZ00|A0A0A0KZ00_CUCSA4.5e-6294.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268030 PE=4 SV=1[more]
tr|A0A2R6RBJ7|A0A2R6RBJ7_ACTCH1.7e-5688.41Mediator of RNA polymerase II transcription subunit like OS=Actinidia chinensis ... [more]
tr|A0A1S4BT41|A0A1S4BT41_TOBAC1.7e-5687.68mediator of RNA polymerase II transcription subunit 21-like isoform X1 OS=Nicoti... [more]
tr|A0A1J6IVT0|A0A1J6IVT0_NICAT1.7e-5687.68Mediator of rna polymerase ii transcription subunit 21 OS=Nicotiana attenuata OX... [more]
BLAST of Bhi08G000094 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449895.14.0e-6295.65PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis melo][more]
XP_004149640.16.8e-6294.93PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis sativ... [more]
XP_022958635.18.9e-6294.93mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_... [more]
XP_022153730.15.8e-6194.93mediator of RNA polymerase II transcription subunit 21 [Momordica charantia][more]
XP_023532119.15.8e-6193.48mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pe... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: INTERPRO
TermDefinition
IPR037212Med7/Med21-like
IPR021384Mediator_Med21
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0016592 mediator complex
cellular_component GO:0043078 polar nucleus
molecular_function GO:0003712 transcription cofactor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000094Bhi08M000094mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..130
NoneNo IPR availableGENE3DG3DSA:1.20.58.470coord: 1..130
e-value: 1.5E-17
score: 65.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..50
IPR021384Mediator complex, subunit Med21PFAMPF11221Med21coord: 1..128
e-value: 3.0E-27
score: 95.5
IPR021384Mediator complex, subunit Med21PANTHERPTHR13381RNA POLYMERASE II HOLOENZYME COMPONENT SRB7coord: 1..137
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILYSSF140718Mediator hinge subcomplex-likecoord: 1..126

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi08G000094Cucumber (Gy14) v1cgywgoB422
Bhi08G000094Cucumber (Gy14) v2cgybwgoB046
Bhi08G000094Cucurbita maxima (Rimu)cmawgoB0220
Bhi08G000094Cucurbita maxima (Rimu)cmawgoB0267
Bhi08G000094Cucurbita moschata (Rifu)cmowgoB0214
Bhi08G000094Cucurbita moschata (Rifu)cmowgoB0259
Bhi08G000094Cucurbita pepo (Zucchini)cpewgoB0636
Bhi08G000094Cucurbita pepo (Zucchini)cpewgoB1055
Bhi08G000094Wild cucumber (PI 183967)cpiwgoB049
Bhi08G000094Cucumber (Chinese Long) v3cucwgoB051
Bhi08G000094Cucumber (Chinese Long) v2cuwgoB049
Bhi08G000094Bottle gourd (USVL1VR-Ls)lsiwgoB337
Bhi08G000094Melon (DHL92) v3.6.1medwgoB176
Bhi08G000094Melon (DHL92) v3.5.1mewgoB174
Bhi08G000094Watermelon (97103) v2wgowmbB451
Bhi08G000094Watermelon (97103) v1wgowmB499
Bhi08G000094Silver-seed gourdcarwgoB0216