Bhi08G000088 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000088
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	syndetin isoform X1
Location	chr8 : 4029019 .. 4045100 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCAAACCTGTTTCCATTTGGTAGTGTTCTCGGAAACCCTTTGGCGTTCGATGGTGATTTGAGCGAAGGATTCGAGACTTCCAGGTTTCTCTTCTTTGTTCCGTTTCTTCTGCTGCAAGGAGGTGGAATGGACTTGTCCAAGGTTGGGGAGAAGATTTTGAGCTCCGTGAGGTCAGCTAGATCGCTTGGACTTCTTCCTACCACTTCTGATCGGCCGGAGGTAACCGATGGCACTATTGGCGTAGTTTTGGATGATTTTTGGTAGCTGTTGTGTAGTTGGATTAGATTAAGTTGATGCTTACTGGTTCTGAGAAGTGCTTTTAAATTCAATTGAAGCATCCTTTAGCTACATTATTTTACCTTGGCTAATTAATGGCATTGATTTTGTTATAGAGATAATCAATAGTTTATGTATGACATTTGATGAATTGGGTTCCTGAGGATGAAGGCTTTTACAATTGAATTAGGTAGCCTGTAATTGAGATGTGTACATGGGATTAGAGAGACAGATAATTTCACGAATCCAGAAGAGCTGGCTACAAAAGAGAGGGTAAGAGATGGATATCTCTCTTTGGAACCCCTGGTCAAAGGGGATTGTAGAATATATCCCCAATTTATTTAGTTAAGAATAGAAGTTACAGAAACCACAATGAAAAGCTCTCCAAGGGGAACTAGTTTGTTTTGTAACATTAAAAAACTGTGATCCTAAAGATACCTGCATTTGCTTGATTGAAGGAAAAGAAGGTGCGGGTCAATGATTTTAGAGCTATTAGCTTGGTGAATGTGACTAAAAATTATTGCAAAAGTTATTGAGGAAAGGACAAAAAGATTATTATGTTTTGAGTATGTTGCTTCCAATATCCTTGATTGGATATCAACAAATTATGGATTATATTCTTACTGCAAATGAAATTTTGGAAGACTTGAGGGAAGAAATAGGCAAATGGGTGGGGTTTTGAAACAGATCTTGAAAGCACATGTTTTTTTTTTTTTTTTTTTTTTGGGATAAGAAAAAACATATGATATAGTGAGATTTTGGCAAGAGGTGGATACGTCCTGTTTAATCTCTTACTTTGCGGTTAGTCTTTCTTTTTTCCTGAGTGGTATACACCATGACATATTAGGGCAAATAAAGTGAGGGGGCTGTTTTCAAATATAGGAAAATGAACCAAAATATTTACAAATGATAGCAAAATATCACAGTCTACCTGTGATAGATTGCGATGGACAGCGATAGACTACTATCTGTCTATCATGACACAGATAGACACGTCTATCGCGGTCTATCACAGATAGATTATGAGATTTTGCTATTAGTTGTAAATATTTTTAGCAGTTTTGTCATTTAAACAAAAATTGTTATGGAAAATTCTGGTGGTTAATCTTGTTTTTTTGATCTTATACCCACAATGGTGCATTCTTGTAAAAAAAGATTGAATCTCAAGCATATCTTCTCTGCTTGCCCTTTTGATTAGGATTTTCTTTTGAAAGATATAGCTTCCTCTTTCAATTGGTCTGTTAGTAAAAAATGCTCCTTTCATATTCTTTTTAGAGACACCCTCTCAAGAAATGAAGGAACTCTTATGGATGCATATGCATTTGATGTAGGCCTTCTTTTGGTCTATGCAAATGTAAAACAACCAAGTTCCAGATAAAGCTAAGAACCCTACTCGATGACCACTTATAAGGATGAGGATCGAATTTGCTAAGAATGATCCTATGCCAAAGAGAGTTGGATTCAAGGGGAAAACGCCAAGACCATTTAGCTAACAACTCCTTGTTGCGAGCCTTTAAGTTCCCAACTTCTAACCCCCCAAGGCCTCTCAATAATCTCCCAGCTAACGAGATGTGCTCCTTTTCCTCTCCTCTCATCCATCTCCTCCCATAAGAGTCTGGTACATTAAATGCTCCGTTAGCAATCTCTGAGAAACTATTTAATCATAATGCCATTGAAGAAAGATGTTCTCACCTCTTGAGTTTCTTGATGCAGGACCTAATTGGTTGGATTCTCAACTTTCTTCAGTGAAAATTATTCTCAACTAGTCATGGTTTCGACACATTCTTCACTGAATAATAGTTCGTCACAAAGTAATGCAAAACAATAGCAAGTAGACAGGTTGACTTGAAGCTATTAATGATGAATAGTTTAAAGATGTGCTCAATACCTTCTTTTTCATTAATTTTTAAGAGGAAACCTAATGCCATATATTCACAAAAATGGAGAAGAAAAACACATCCAAGTTCGTAAGCCTGATTTGAAGGATTAACAACAAAAGACCTCTGAGCTAATTTAATCCGATAAAGCTGTATATTACAAAAAGAATTGTGCAGAGCACTTCACGAAGAAGCTGATAATTGGACATTTTCATAAAAAGTCGCAAGAGGAGGATTTACCATATTTCTCACAAAAGTGGGAAGGAAAAGATTGTATCACGTACTATAGTTATATTTGTAAGACTGAGGGGAAATGTTCTCATCCTGTAAGGTGGGAAATGTTGTCTAAGCTAGGTTTTAGGTGGGGTCAGGCTTGGGTAACGTAATTGTGGGGAATAAAACCCTTATGGCTAAATGGCTTTAGTGATTCTGTCATGATTCTGGCACTTTATGGCATAAGGTTATTGTAGCAAGCATGAACCTCATCCTTTTGAATGGGTGGTTGGTGGGGTTAAAGGCAATTCTAAAAAACCAGTGGAAAGATATGATTGGATAGGTACTTACTTTTAGGATGATAAGTGGTTAGGATATAGACCTTTATGCTCCTTATAATCCCAGTTATATTAGTTGTCCTTGTTGAAGTACTAGCAACTTCAACTGTTTCTCTTTCTGAGAACTTGTCTTCTCCTTTAGATAGTGTTTGAGACGCTGAGTTGAGTTTATGAAGTTTGGAGTTAGGAAATTTGTGTTTGTGGTGTAGAGTTGTGAAGATGGAGTTCATCGATAAATGTACAAAAGAGAGAAAAAGGGGAAAATGGAGTTTCTTGATAAATGTGCAAATTTCAATAGTGAACACTCTGCCAAAGCGAGCATAGCTCAACTGACATCGGAGATGTGTTAGCGACCAAAAGGTCCATAGTTCAGATCCATCTACCAATTGACTAAAAAAAAATAAAACTATTGAAGTTTGTGGAGTTGAGTAATTTAACACTGACTTATATAGAACTTCTTTTAATTAACAAAAGAACTCTTAAGAGAATTTGGTTCTTTTCAGGAAATGGAGAAGAAAAATGCTCTCTCCTCTCTCCTCCCTTTTCAAGCCCTTCGGTGATCACCCTCCCTTCCCGACTACCCTCTCCTAGTCCCAGTCCCCTCCCCTCCCCTCCGGCCGGTCCCTCCTCCTTTCTTTCCCTCCTCTTCCCCTCGTATCCCCTCCTTTGCCTCTAGAACCCTTCACCTCCGTTTTAGCTAAACCCCTCCTCTGCATTAGAGCCGACCTCTGTTTTTGCAACACTATGGAACTAAAAAGCTGTTGTATTTCAGATCATTATTTTTGTATGTGGAAGGAAAAGAATGGTTTCTGGCTGGAAAATTTGAAGTGCAGTAAAAAATCCTTCCTCTCTTCAGATGCAACACGTTGGTTGAATGTTAGCCCAGGAAGACTTTTGAATGGGCCAACCTTCGAATTCTTCCTCCTTAAGGAAAGAGTTGATTAGGGCTTCATCCGGCTAGCAAAGTTTCGAAGCAAGAATCAATGGTTCATTGAATGTGTAGTCTGGCCTTCTTCAGGAGGCAGAACAAACGTCCATATTCCTTATGGTGATGGTGTGACAGGGTGGCATGAGTTTAAGGAAATGGTGAGTCACTCTACTTCAGACCATTCATCTTCTGGTATCATCTCTGTTAACCTTCAAGCATCTTCAACAAAAAGTTTCTCATATGTGGTGAAAGGTAAAAATCCCTCCATCGATTCACTACCAGACCATTCTATTCAAACATCCTTCAGACCGCTTCTCCAGCCCTCTGCTCCAAGTAAGAAGAATCAGAGTAAGCCCTGCTTCTGGGTAAAAAAGGACTATGATGTCTTCCAAGAAGACTTCCATAACCTATGGTTAGTATCAAGGCTTTTTGTTCACAATGAATGGAAGGAAATAGCAAGTGTTTTGAGAGGCTCCTTCAACTCCAAAGTTACTCTAAATCCCCTGCATGTAGATATGGCTTTAATCAGAATTGAACAAGGGGACCTCGGTGAATTTTTTTTTTTTGAAAAGGAAACAACCTTTATTAATCAATATAATTAGTACAAGAGATGAGTACTTTGATAATAAAGGCAAATACAAGGAAATCAATCAGGAAACCGAAGGATTAGTAGGTGCACCTGGGCATCTCAACTAGGTTGACACCCCCATAGCACCCTCATCATATCCAACAAATTGAGAATGCCAACAAAGGCTAAAATAAGAGTAGTTTAATGAAGCAATACAATCTGAATGTTGCAACCGAACAAAATATAGAACTAGGCTATAGAAATCTAAATTACATCAAGAAGCTAAGACAAATAAGAGTACTAAAGAAAGCGAAGCTGCTGTCTCTATTTCTGATGCTTCGATTAATCTTCCAATTGACAAAAAGATTGCCAATTTAAACTTATGTCTTGCAAGGAGTAGGCTTCAAAGCAATTAGAAATGGAGCACCAAAGCGAGGCATTGAGCTTTGCTGCCTCAAAGCGATTATACCAAGGAGTTTCAATCCCATTGAACATTCTTTGATTTCTTTCAAACCAGATTTCAACCAGCATTGCTTTTACTCTATTAGTCCATAGTAAATTGGAGTATTTCTTCAGAATAGGACCTGAAAGTAGCTGCTGAACATTGCATCTAAAGGAAAAATCAAAAACCCAAGAAGTGTTGAAGCACTTAAGGAATTTCTTCCAGCAGTTGAAGGCAAAACAACAGTCAAAAAATAAATGTTGGAGGTCTTCTTCGGCTGATTTACAAAGGACACACCAATTGGGGGAAATAGAAAAGCAAGGCAGTTTTTTTTGCAGCACCGATAAACAATTTAGGGTTCCAAACAGCATTATCCAAACAGTTATATTAACCCTTCGAGGGCTGTTAGACTTCCATAGACCCTTGTGAAGGCTGGTTGATAATGGGGTGGTCTCGGAAAGATGGTTAAACAGGGATTTTACTGAGAAAGAGCCATGTTTTTTCAAGGGACCAAATGCGAATGTCTTCCTTATTGGATAATCTTTGCTCAGCCAATAATGCTAGTAAGGCTTGGAACTCTAAAATCTCATCATCTTTTAGGTCTCTTCTGAAGTTTAGAGTCCATGTGATAGTCCCAATACTGTGATAATGAACCATTTGGAAGCAATGTTAGACTGAAAAGAGAAGGAAATCTGTCTTTTAATTGAAAAGAGTCCAGCCAAGGGTCATGCCAAAATGCAATTCTGGTTCCATTCCCTACTTTAAAGACTGCCAACTTCTCAATAATCAACCAAGATCTTGAAATACTTATCCAAGGGCTTCGAAGGCTACAATGAACCTTGCCGGAAGTATGCCAACCAAAAAGACTGCTACCATGTATACTCAAAATAACTTGGCTCCAAAGGGAAGGTTGCTCTTTTAGGAATCTCCAATCCCATTTGGCTAATAAGGCCACATTTTTAGCTTTTAAACCTCCAATTTCGAGTCCCCCATCAACTTGATTCTTAGAAACTAGCTCCCATTTTGCTAGATGATTTATCTTTCCCCTTTTAAAACCTTCCCAAAAGAAGTTTCTGATAATTTTTTCAATGGTTGAAATCACTTTTTTAGGCATCAAGAAGGAGGACATATAGTAAGTTGGGAGGTTGGCAAGGACTGAGTTGCATAAGGTAGTTCTTCCCCCTCTTGATAAGTTGTATCTTCTCTACTTGTCAAGTTTTTTGTGAACTTTATCAATGACCGGTTGCGAAAACAATAATTTCTTTGGGTGCCCCCCAAGAGGAAGGCCTAAATATACGAAAGGTAGGTGTGTTAATTAGCAACACAGTCTTGAAGCCACTGCCCTTAACTTAGAATCTTCAATATTTATCCCACAAATGGCAGATTTTTCCCAATTAACTTTCTGCCCCGAACACCACTCAAACAAAGTAATAGATTTTTTGAGATTGTCTAGCATGTCATCATCATACTTGCAAAAGAGTAAAGTGTCATTAGCAAACTGGAGAATAGAGAGATGTACCTTGTTTTTTCCAACCACAAAGCCTTCAAACAGCCATTTTTCATGAATTCTGTCAACCAAAACACTAAGCAAGTCACTTACCAAGAGGAAGAGGAAGGAGGATAGGGCGTCCCCTTGCCTAATTCCCCTTGTAGCCTTAATCCTTCCTTTTGGTCTTCCATTAATGAAGATGGAGAACATTGGGTTAGTGATGCAGCCCAAAATCCAAGTTATCCACTTGGGGTGGAAGTTCCTTTCCTTAAGGGTTTTTTTCAAGAAAATCCCAATCCACTCTATCAAAAGCCTTTTCAAGATCAAGCTTTAAAATCCAACCCTTCTTCTTCTTAATTCTGTAGTGTTCTACGACCTCATTAGCTATTAAGACCGGATCAAAGATTTGTCTCCCTTCAATGAAAGCACTTTGAGTTTGACTTGTAAGGCTAGGCATTACTTTCTTGAGCATTTTTGCAAGTGCTTTAGCTATAATCTTATAGATTATTGTAGATAGGCTAATGGGTCTGAAATCTTTCACTAAAACTGCCTCTGATTTTTTCTGAATTAAGCAAATAAAATTTTCTTTGATGCAAGAATTGAGCTTCCCATTTCGGTAGAAATCATCAAAAATACTCTTTATATTGTCCTTTAGAAGCTCCCAAAATTTTAGTATGAATTCAATTGTGAAGCCATCCGTCCTCGAGCTTTGTTTCTTCCAACATCTTTATTGCTTCTTTAATTTCTGTCCAAATTAAATCTGGAAATCAGCCCCAAATTCTGATCTGAAGAGACCCTTGGCCAGCTCAGATTCTGAGGTATATATCTCAATCCTTGACTTTTTGAGTATAGATTACTGTAAAAATCAATAATTAGGGATTCCACTTCTCTGAAATTCTTTGTAGTTCCCCTTGGTCATTGATTAACTCCGTTATTAGGTTTTTCCTTTTCTTGGCAGCAAGAAAAGGTGGAAGAAGCTGTATTTTCATCACCCAATTGTAACCAATTCAGTTTGCTTTTTTGAATATGGTTCTTTTCCTCTGTTTGGTAGATGGAAACTAATTATGCTTTTAGAGAGGTTCTTAAATCTTCCTCAAGAGAGGGTTCCTCATGAGACTCCATAATTAAATCTCTTCTTCGAATTTCTTCTAGTAGTGTTTCTTCATTAGCTTTCAGCTGCTTGGTTTTTTCAGCATACCATCTTTTGAGGGCTTGTTTCAACTTTCTTAGTCTGACTGAGAAATTAAAACCAGCCCACCCTTGCTGAATTTCCAGACTTAGAGAACGTTCAATATTCTGCAACATTCCTTATCAAGTAGTCAACTATTGTAAAATCTAAAAGGGAAGGAGCCCCATTCAACAGCTCAGCTTCAAACAAGAGAGGAAGTGATCAAAAATTGGTCTAGTTTGTCTTGAGACTCTTGAGTTTTCGAACAAATCATCCCAACTACTTGTGATGAAGAATCTGTCAATCAGTGATCTTGATACTGTTTCTCCTTCTTGTGACCAAGAGAATCTTCCATTTGACATGGGGATTTCAAGTAGATTCGTATTTCTAATGAAATTATTATTTGTCTGATTTCTCTAGTTGCTCTTCCTACTGGAAATCTTTCTTGTCTTCTTCGAATACAGTTAAAGTCCTACCAATACACCAAGCACTATCACATCTTTCTGCTAATGAGGTTAATTCAATCCACAAATTTCTTCTTTCACTAGGGCTGTTTGGTCCGTATACATTGGAAATCCAGCATAATTTCTTACAAATGGTACTGCACTTTAATTTGTAAATGAGAAATTCTACCTTGAAGACTCCAAAACTACAATTTTGCTTTCATCCCAAAGAGAAAGAATACCCCCTGATCTGCCTTATGCTTCTACAAAAGCCCAACCCCACCTCTTTAGAACTCCAAATGCTTTTTATGAAAGGGAGATCAAAGCTGTCCTTTTTTGATTCTTGAAGTAGAAAACATCCGGATTTATTTTCTCAGAAGCTTTTTTATAACTAATCTTTTAGATTTATCTCCAAGTCCCCTAATATTCCATGAGATAATCTTCATTTGCTGATTATGCCAGGGTAATGTCACAAATATTTAAGAAAGAATTGAGCTCTTGAGGTAGTTCAATGTGGGATGGAGGGATTAAGACCTGCTAATCTTGTACCTCCTCTTCATGGAAAAGCAAATTCAAGTTTAGTATGGCATCTTTTTGATCTTCTAAGCCTTTGAATTTCAAGTTATGATCCTCAAAGTCTAAGTCTTCACTGCTGACACTAGCTATTGAGGCTTCATCATACTCTTGTGGTAGCTTTTTAGAGTCAAAGACAGAAATGGGAGACCCTTGCACATAAATGAAAGATGGATCTAAGTTTTCACCCAACTGAGGAGTGGTTGAAGAAGGAAAAGTGGGAGGAATTACTGACCTTTCTGCCTTATCAATAGGTATTTGTACCCGAGCGCAACAATCTTCCAATAAGTCTGAGTTTGCAAGTAAGGACCACGTTTTAACAGTGGAGCTTTTCCTTCTTTCAAAGTATTTAGGGAATGGCTTGAGAAGATGTGAGCTTCGGCTAAAGAGGGACACTGAGTTTTCTTCTAGATATTTCAATGAATTATCAAATGCCGGAGGGGTAAATTGGATAGGGGATTGAACAGGGGAGGACTCTTCCTCTTTAGCATTTAACGTATGTGTCTCCTCGGTATCCTTTGGCCAGCCACAACTTTTTAATCGAATATGATACATCAACTTCCTTGTCTCTTCAGTGGGGAGTTCATTTACTGCCCCGCAACAGGATAATTTGTTTTTCTCTCGAGATGCTGATGGTTTATTTATTGTGGGGCCATGTAGAACTGAAGATGAAGGGTTTATCTCTTTCAAAATAATTGGCTGTTCTTCCAAGGAATCTGAAACGTCAGTTCTTTGGTTTTTTTCCAGAAGAGATATTTTAGTAGGGCTTATAAATGAGGTGTTTTTAGAAGTAAATAGAGTGGTGACTGTTGGAGTTCTTGAAGGAGTGGCTGTTGGGCTTCCCTTGACTTCCTTCTCTTTTCTTAATGAGATTTCTTCATTCTCTTTCCACATGTTCACACCTAACCGGTTCTGGACTTCGGGTAGAGTGGTTTCTGATTGGCCAACCAATTGCTCCGGCAAGCTACCTTCCTCTTTTTCCGGCAAAGATGTCTCCTGTTCTGATTTTTCCGGCGAGCTGACATTGACTTCTTTTGAAAACAGAGGATTCCTTGCAAATTTTTTTTGATTTACTGCTTTATCAAGGAAAGACCACTCTTCAGCTGAATTTGGATGGCTTAATCCTTCATCGATCTTAACCTGATTTAGTCTAGCTATGTCAACCGGATTGTGGAGTTCATTTCCTTCCAAAATTCTCATATCTTTTCTTGGAGGATCCAAAAACTCTTTGAGGGGACCTTGGTGAATTGATGGAGTCTATTGGAAAGTGGCAACAATTTGGTCCTTTTCATCTTCGTTTTGAAAAATGGAATTTGAAAAAGCATGGAAGACCAACAGTCATGAAAGGTTTTGGGGGTTGGTTGAGCATAAAAAATCTTCCCTTGGATTTTTGGTGCAGAAGTACTTTTGAAGCTATTGGTGCCTATTTTGGTGGTCTGGCCTCAATCTCATTGATTGTCAAGAAGCCAAAATCAGAGTTAAAAGGAATTTATGTGGTTACATCCCGACAACTATCGAAGTTAAACATGTAAGCCTTGGTAGTATTTTCTTGAATTTTGGGGATATACAGTGCTCAGACTCCCCTGTTATTAATCCCAGTGAAATTTCTATTGATGAGTTCTCAAATCCTTTAGATATATTGCGTTTAAATCAAGTTTTGAAGGATGAAGGGGTCGATTCCCTGATCCTACATTCAGATTGGTCCTTTTTAGCTTCCTACCAGTTGGTTCCAAGCTGCTCGAGGAACCCTAATACTCCAATGGAAAATGTACAACAGTCGACAGTCAAACCGGAGAGACTTTTCCGGCCAAACAGAGCAGACGAAGGGGAAAGGTCGCCAGATGTTAGTTGGAAAAGAAGAGGAAATGTCACAGAAGAAACCGAAGAGTTGTCTTTAATGAGGAAAGAGAAGATTCCAGCCGGTCAACTTTTAAATAATGTTGTCTCCAGCAAGTTATCTAATAAAGAGGAAGAAGGGGAAAGGTCACGACTCTTTACCAGCCCTTCAGCCGACCTCTCTTCCCCCCAAAACGTTTTTAACACGTCAGAAATGCAGCAGGAAGGTCAGGATAGAAATTTGAAAGATTCAGGTTATTTATTCTCCAAAATATCAGGAGTATCTGAAAGGTCTCAAAACGAAGGCCAGGTCAACAGTTTTTTTAATCTAGTCTTCAATAATATTACCTGCCACTTTGGAAATCCCCCAGGTTGCCATTCTCCAGTCCAAAACCAATCAAACACTTGGGCTCACTTCTCTAATGTCTTCACCTGGAGAAAAACCTCCTTAAAAAATAAATGGACAGGACTTCATGACTGGTGCTTAACGGCAGCAAGTGTGGCTTCGGACCCTTCCATTTTAGTGCATAGCGATAGCAATCCAAACTTGTTAGAGGTAAGTTGCACAAAAATCCAACTCCCCTCTCCAACTTTAAATAAAGCCTTCCCCAGCCCTTCAAACTCTGCATTTCAATCACTCCAGTTTCAACATTCCAGAGTCAAGCAACACCTTCATTAGGGGATTACCCTGCTCCCCTCCTAAGCCAAGAAGTTTAGAAATTTTGGAGTTGGACTCACCTTTCAGTGTAAGCAGTGCTGAATTGGATTTTTGCCCTGTTTCGAATCAATTTGAAAGGCTCCAAGACTCTGCCCTTGGAATAGACCTCCAGGCATTATTCTCTATTGAAGAAAAGGATATCTCTTTGGAGCATTGCACCCTTTGTCCCCCCTCAGTTCAGCCTCTAGAAATTCTAGAGCACCTGTCATCAATAGTTAAGGACTGCAGCTTCATATTGGCCTGAAAATCCCCTCTCCTGATAGCCTCCCACACTCCAGTTACTGAAGATCCTTTCATGGAATACAAGGGGTCTTAAAGACTTAAATAAGAGAATTCACTTAGAAGGCTGTTCAAAAGTTTACATCCAGATGTAGTACTTATTCAGGAGTCAAAAAAAGAGAGTTTCGATGCTGCCTTCATCAAATCTATTTGGAGTTCTAAAGAAATTGGTTGGGAATCAGTGGATTCTTTTGGAAAGTCTGGTGGATTATTAACAATGTGGGATAACAGCAAAATTGAAGTTTTAGAATCCCTTAAAGGGGGATATTCACTGACAATCAAATGTCGTACCCTATGCAAGAAAGTCTGCTGGGTCACCAATGTTTATGGGCCGGTTGATTATAAGGAGAGAAGATATATATGGCTGGAGCTCTCTGTCATTGCAGGGTATTGCCCTGTTGCTTGGTGCTTAGGAGGGGATCAGCTGGAAGATATACCAAAGGCATGAAGCTTTTTAATGAATTCATTGATTTAGCCAACCTGCTAGAGATTCCTTTATCAAATGGGAAATTTACTTGGTCTAAGGGAGAAAATTCCAACTCTAAATCTTTGTTGGATAGATTTTTTATTAACAAGGAATGGGACGAATTGTTTACTAATTCAAAGGTGAACCACCAGGTAAGACTTCTTTCTGATCATTTCCCTTTACTCCTAAGTGCAGGAACTATTATTTGGGGCCCCTCTCCATTCAGATTTTGTAACAGCTGGTTACACAACAAAGAGTGTGTCTCTTCCATTGAAAAATCCTGGAAAAACAGCAACATAAAGGGATGGCCTGGCTATGTCATCAATGCAAACTTAAGGCTGGTCAAAGAAGCACTAAAAACCTGGTTAGCTGAATATCAAAAAGCACAAAACAGAGAGGAAATGACCTTGTTAAAGGAAATAGCCGAAAAAGAAGTTCAGATTGATTCTTTGGGTTGGGATTCAGTGTTAGCAGCCAACATATCCAAGCTAAAAACAGAATTGCTAAGCATCTATCTGCTGAAAGAAAGGGATCTAATACAGAAATGTAAGTTGAATTGGATAAAATTGGGAGATGAAAACTCTAGTTTCTTTCACCGGTTTTTGGCAACAAGGAAAAGGAAGAATCAGATCATTGAGCTTCTTAACGACCAAGGGGTGCCTACAAACTCTTTCAAGGAAGTTGAAGGAATTATTCTAAACTTTTATGACTCCCTCTACTCTAAAATCCCAGGTGTCAGGTATTTACCAGCTCCTTTAAATTGGCCCCAAGTCACACAAATCCAGAATGCTATGCTCACTATAAGTTTCATGGAAGCAGAAATTGTTTTGGCCATCAAATCTTTGGGGAAAAATAAAACCCCTGGTCCAGATGGCTTTACTTCAAAGTTTCTCTTGAGATTTTGGCCTTTAGTCAAGGATAATTTTACTAAGCTCTTCGAGGACTTTCACTCTAGTGGCAAATTGAACGTGTGTGTAAGAGAAAATTTCATTTGCCTTATCCAAAAAAAAGAAGATGCAGTCTCCATCAAGGATTTCAGACCAATCAGCCTTACTACCCTACCTTACAAAGTAGTGGCAAAGGTTCTTGCAGAAAGATTGAAAAAAGTGATGAATTCTATTACCGGCCCATCACAGAATGCTTTCATTGATGGAAGACAAATTCTTGATGCTGTCTTGATTGCTAATGAAGTGGTGGAAGATTACAGAGCAAAAAAGAAAAAGGGTTGGATATTAAAACTCGATATGGAGATGGCCTTCGACCGGGTGGATTGATCATTTCTAGAGAAGATTTTAATCGCAAAAAATTTTGACTCCCGGTGGATTTCATGGATTTTGGGCTGCATTAAAGACCCTAAATACTCAATCATCATCAATGGTAGACCTCGAGGTCGTATTCTAGGTTCAAGAGGTATTAGACAAGGAGATCCCTTGTCACCTTTCCTCTTTATCTTATTAAGTGAAGTGCTCAGTTCTATCATTGAAAAGCTGTACGTTAATGGAGTATATGAGGGCTTTGTGGTTGGAAAGGAGAGGATCCATGTTCTATTGCTTCAGTTTGCTGATAATACCCTTATATTTTGCAAATATGAGAACGAAATGCTTCTAAAGCTAAAAGAAGCAATCAGTCTCTTTGAATGGTGTTCTGGTCAAAAGATTAACTGGGAAAAGTTAGCCCTCAGTGGAGTTAATATAGCAGAAAGTGATCTATCAAATATGGCTGGTCTTCTTAATTGCAGGGCCGAAGCCCTCCCCATCTCTTACCTTGGTTTTCCCCTTGGAGGCTATCCTAAGCAATGCTCCTTTTGGCAGCCTGTGGTAGAAAAGGTCCATCAGAAACTAGATAAATGGAAGCGATTTAATCTCTCAAGAGGTGGAAGGGCAACGCTTTGTTCTTCAGTTCTATCCAACCTCCCAATATACTATATGTCTATCTTCTCAATGTCGGACTCAGTGGTTTGCTCCTTGATTAATCTGAAACTTCTTTTGGGAAGGCCATAAAGGAAGCAAAATCAATCACCTGGCTAAATGGAGTTTAGTCTCTCAATCTATTTTAAATGGAGGTCTTGGTTTGGGTGGACTTAAAAGCCAAAAAACACGGCTTTGCTTGCCAAATGGGGCTGGCGGTACATGATGGAGGGGAATTCCTACTGGAGAAGGATCATTACTAGCATCCACGGCAAAGGGCCCTTTGATTGGCACACATCTGGAAAGTATGGGAATAGTTTGAGAAGGCCATGGATAAACATTTCAAAAAGCTGGTCCAAGGTAGAAGATTTAGCTCCCTTTACTGTTGGAGAGGGAAATAGAGTAAGCTTTTGGTCAGATCCTTGGCTTTTCCCTTCTGCATTGTCGGCTCATTTTCTATCTCTGTTTAGGATTTTCTTATTACTAAGGGGCTCCATAGCTGAACATTGGGATCACTCTTTAAACTCTTGGTCCATCACCTTTCGAAGGTTGCTAAAGGATGAGGAGATTGCTCACTTTCAAGCATTGCTGCTTGCCTTATAAGAAAAGGCAGTATCATCTAACCCGGACAGTCGTCATTGGTCCTTGGAAGCCTCAGGTTCTTTCATAGTCAAGTCCTTCTCGGTCCACCTCTCTTCCAAGCGTCCATTGGAGATCTCCCTTTTCAAAGCTCTTTGGAAATCTAAAAGTCCAAGTAGAGTGAACATTCAGATATGGATTATGCTTTTTGGCCTTTTGAATTGCTCTATGGTTCTGCAAAGAAAACTTCAATCAGTCACCCTACTGCCCTCTATGTAATTCGGCAAGTGAAGATTTACAGCTCCTTTTCTTCTCATGTGCATTTGCAAAAAAGTGTTAGTGGTCTTTCTTTCAGTTGTTTAACTTTGTAGGAGTTTTTGGTGATAGTCTCAAAGGCACCCTAAACTATCTTCTCTCGAGTCCCTGTCTACCAAAAAAGCCTCGGCTGCTATGGATCAACATGGTCAAGGCTATACTTTCTGATATTTGGTTCGAAAGAAATCAGAGAATTTTCCATGATGCGGAAAAAAGTTGGGAGTTTTGCTTTGATTCAGCTAAAAGGAATACTTCGGCTTGGTGCTATTTGAACACAGAATTTGATAGTTTCTCAATCCGAGACATTTTTCTGAATTGACAGGCTTTTATTTTCCCAGCACTGTAACTTTTTCCAGTTTCTGTCTCGGGGATCTCTTCATTCTCTAAAGATGTATTCGTATTTCTTTTCAAGTAGGCTCGGGCTTTTACTTGTTGTTTGCTCTTTATGCTTTTTGTATAAATCTCTTGTACTTTGAAGCATTAGTCTCTTTTTATAATGCAATAATAAAGAGACCCGTATCCTTTTTAAAAAAAAAACACCGACTTATATAGTCGGTGGGCCGAACATTCCCTTAAGTTTTTGTTGTTTGTTGACCAATAGGGAAACAACAAATTTGCTGACTTTGTTATCTTTGTTGGGGGACTTTTACTTTGTCCCCGATAGGAGGGATGCCCACTTTTAGAGTCCTAGTCCACCAAAAGGTTTTTCTTTTTTTCTTTTTTCTTTTGAAAAAAATCTCTTTTCACAAGAGAGTTCAATCATCCAAAATAGCTCAAAGGCAGTGATTTAAATCCAAAATAGCTAAAAGCTTTTCTCATGCCGCTTGTTAAGATTGTTTAGTCTTTTTCTCCGGCTTTTTGTTATTTCCTTCTCCCTGTATTTATTTGAAGTTGTACTTTTGTAAGGACATGATGAAGGCGCTAAGGGGGTGTCAACCTAGTTGAGATGCCCGGGTGCGCTTCCTGATCTTTTTCTTATTTAGTAGTCCCGTGTTGTTTTCCTTTGTTTTCTCTTCATGCTCTTTGTATAACTCTTTTGTACTTTGAGCATTAGTCTCTTTTTATATAATTATAATAAAGAGGCTCGTATCCATTTTCTAAAAGCTTTTGCCAAGATGGCGTCCTAGTTTTTTCAATCTATTTTGTTAATTTTGTCACACTCCTGTAGTTGGTTCCTCTGGATTGTTGTTATTTTTTAGGCTCTGCAAACTTTGGTGTTCTACTTCTTTTGTTTCTTTGGATTTTTTTTTTCTTCTGTTTTTCACTTCCTTAGAGTTTGTACCCTTGAACATTTTTCTTCTTTTTCATCTATTACCGAAAAGTTTGATTCTTGTTGAAAGAAAATTAAACACCTTTTTGCATTTTTGTTTATCTGGAAAAAATGAATGACTGGGAATTCAATCACTTGTTTTCTACCTTACTGAGCAGGTTCCAGCACGTGCTGTGGCTGCAGCAGCTGTTGCCCGTGTGCTTGCAGGATTGCCTCCTCACCAGAGATTTAGTCTCTCATCTAGCTCGGAAGAACTGAGCTCAATATATGGCAGTAGAAATCATGGCCACGAAGTAGAGGAACTAGAGGAAGTTTTCTATGAAGAGGTGCTACTTGCTACTGTTACTATCATTTACTTGGGATCATTCATTTACAGGCACGATCCTTGTAA

mRNA sequence

ATGCAGCCAAACCTGTTTCCATTTGGTAGTGTTCTCGGAAACCCTTTGGCGTTCGATGGTGATTTGAGCGAAGGATTCGAGACTTCCAGGTTTCTCTTCTTTGTTCCGTTTCTTCTGCTGCAAGGAGGTGGAATGGACTTGTCCAAGGTTGGGGAGAAGATTTTGAGCTCCGTGAGGTCAGCTAGATCGCTTGGACTTCTTCCTACCACTTCTGATCGGCCGGAGGTTCCAGCACGTGCTGTGGCTGCAGCAGCTGTTGCCCGTGTGCTTGCAGGATTGCCTCCTCACCAGAGATTTAGTCTCTCATCTAGCTCGGAAGAACTGAGCTCAATATATGGCAGTAGAAATCATGGCCACGAAGTAGAGGAACTAGAGGAAGTTTTCTATGAAGAGGCACGATCCTTGTAA

Coding sequence (CDS)

ATGCAGCCAAACCTGTTTCCATTTGGTAGTGTTCTCGGAAACCCTTTGGCGTTCGATGGTGATTTGAGCGAAGGATTCGAGACTTCCAGGTTTCTCTTCTTTGTTCCGTTTCTTCTGCTGCAAGGAGGTGGAATGGACTTGTCCAAGGTTGGGGAGAAGATTTTGAGCTCCGTGAGGTCAGCTAGATCGCTTGGACTTCTTCCTACCACTTCTGATCGGCCGGAGGTTCCAGCACGTGCTGTGGCTGCAGCAGCTGTTGCCCGTGTGCTTGCAGGATTGCCTCCTCACCAGAGATTTAGTCTCTCATCTAGCTCGGAAGAACTGAGCTCAATATATGGCAGTAGAAATCATGGCCACGAAGTAGAGGAACTAGAGGAAGTTTTCTATGAAGAGGCACGATCCTTGTAA

Protein sequence

MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRSARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHEVEELEEVFYEEARSL

Homology

[Close]

BLAST of Bhi08G000088 vs. TAIR10
Match: AT2G27900.1 (Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515))

HSP 1 Score: 158.3 bits (399), Expect = 3.3e-39
Identity = 96/142 (67.61%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 1   MQPNL-FPFGSVLGNPLAFD--GDLSE-----GFETSRFLFFVPFLLLQGGG-MDLSKVG 60
           MQPNL FPFGSVLGNP  F+  GDL+E      FE+SR  F +PFLL QG G MDLSKVG
Sbjct: 1   MQPNLFFPFGSVLGNPFLFNGGGDLNELGSGAAFESSRVFFLLPFLLSQGTGVMDLSKVG 60

Query: 61  EKILSSVRSARSLGLL--PTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELS 120
           EK LSSV+SA SLGLL  P+ SDRPE+PARA AAAAVAR LAGLP  QR S+SS++ EL+
Sbjct: 61  EKFLSSVKSATSLGLLPSPSISDRPEIPARAAAAAAVARALAGLPSDQRLSISSTATELN 120

Query: 121 SIYGSRNHGHEVEELEEVFYEE 132
           SIYG+R    +VEELEE FYEE
Sbjct: 121 SIYGNRPLPQQVEELEEGFYEE 142

[Close]

BLAST of Bhi08G000088 vs. TrEMBL
Match: tr|A0A1S3CG39|A0A1S3CG39_CUCME (syndetin OS=Cucumis melo OX=3656 GN=LOC103500532 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-63
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGS LGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGSALGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
Sbjct: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. TrEMBL
Match: tr|A0A0A0LV98|A0A0A0LV98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145910 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.9e-63
Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGS LGNPLAFDGDLSEGFET RFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGSALGNPLAFDGDLSEGFETPRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
Sbjct: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. TrEMBL
Match: tr|A0A2P5DD37|A0A2P5DD37_9ROSA (Vacuolar protein sorting-associated protein 54, N-terminal OS=Trema orientalis OX=63057 GN=TorRG33x02_254950 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-51
Identity = 110/131 (83.97%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFG+VLGNP  F+GDLSEGFE+SR  F VPFLL QGGGMDLSKVGEKILSSVRS
Sbjct: 42  MQPNLFPFGTVLGNPFLFNGDLSEGFESSRVFFLVPFLLAQGGGMDLSKVGEKILSSVRS 101

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLP+ SD PEVP RA AAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSR H   
Sbjct: 102 ARSLGLLPSASDHPEVPQRAAAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRPHSQV 161

Query: 121 VEELEEVFYEE 132
           V ELEE FYEE
Sbjct: 162 VAELEEDFYEE 172

[Close]

BLAST of Bhi08G000088 vs. TrEMBL
Match: tr|A0A2P5C2V1|A0A2P5C2V1_PARAD (Vacuolar protein sorting-associated protein 54, N-terminal OS=Parasponia andersonii OX=3476 GN=PanWU01x14_188330 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.1e-50
Identity = 108/131 (82.44%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFG+VLGNP  F+GDLSEGFE+SR  F VPFLL QGGGMDL KVGEKILSSVRS
Sbjct: 1   MQPNLFPFGTVLGNPFLFNGDLSEGFESSRVFFLVPFLLSQGGGMDLFKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLP+ SD PEVP RA AAAAVAR LAGLPPHQRFSLSSSS+ELSSIYGSR H   
Sbjct: 61  ARSLGLLPSASDHPEVPQRAAAAAAVARALAGLPPHQRFSLSSSSKELSSIYGSRPHSQV 120

Query: 121 VEELEEVFYEE 132
           V ELEE FYEE
Sbjct: 121 VAELEEDFYEE 131

[Close]

BLAST of Bhi08G000088 vs. TrEMBL
Match: tr|A0A2I4FQ37|A0A2I4FQ37_9ROSI (syndetin isoform X2 OS=Juglans regia OX=51240 GN=LOC109001080 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48
Identity = 106/131 (80.92%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFG+VLGNP  F+GDLSEGFE+SR  F VPFLL QGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGTVLGNPFLFNGDLSEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLP+TSDRPEVPAR  AAAAVA  LAGLPPHQRF L SSSE L SIYG R  G  
Sbjct: 61  ARSLGLLPSTSDRPEVPARVAAAAAVAHALAGLPPHQRFDLPSSSEGLRSIYGIRPSGQV 120

Query: 121 VEELEEVFYEE 132
           VEELEE FY E
Sbjct: 121 VEELEEGFYGE 131

[Close]

BLAST of Bhi08G000088 vs. NCBI nr
Match: XP_008462106.1 (PREDICTED: syndetin [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 3.5e-63
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGS LGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGSALGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
Sbjct: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. NCBI nr
Match: KGN64889.1 (hypothetical protein Csa_1G145910 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGS LGNPLAFDGDLSEGFET RFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGSALGNPLAFDGDLSEGFETPRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
Sbjct: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. NCBI nr
Match: XP_011654226.1 (PREDICTED: coiled-coil domain-containing protein 132 isoform X1 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGS LGNPLAFDGDLSEGFET RFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
Sbjct: 1   MQPNLFPFGSALGNPLAFDGDLSEGFETPRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLPTTSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
Sbjct: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. NCBI nr
Match: XP_022152901.1 (syndetin isoform X2 [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 1.3e-60
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGSVLGNPLAFDGDLSEGF TSRFLFFVPF LLQGGGMDLS+VGEKILSSVRS
Sbjct: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFPTSRFLFFVPFFLLQGGGMDLSRVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLP TSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHG E
Sbjct: 61  ARSLGLLPATSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGQE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

[Close]

BLAST of Bhi08G000088 vs. NCBI nr
Match: XP_022152900.1 (syndetin isoform X1 [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 1.3e-60
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFETSRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS 60
           MQPNLFPFGSVLGNPLAFDGDLSEGF TSRFLFFVPF LLQGGGMDLS+VGEKILSSVRS
Sbjct: 1   MQPNLFPFGSVLGNPLAFDGDLSEGFPTSRFLFFVPFFLLQGGGMDLSRVGEKILSSVRS 60

Query: 61  ARSLGLLPTTSDRPEVPARAVAAAAVARVLAGLPPHQRFSLSSSSEELSSIYGSRNHGHE 120
           ARSLGLLP TSDRPEVPARAVAAAAVAR LAGLPPHQRFSLSSSSEELSSIYGSRNHG E
Sbjct: 61  ARSLGLLPATSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGQE 120

Query: 121 VEELEEVFYEE 132
           VEELEEVFYEE
Sbjct: 121 VEELEEVFYEE 131

The following BLAST results are available for this feature:

BLAST of Bhi08G000088 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi08G000088 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27900.1	3.3e-39	67.61	Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar p...	[more]

BLAST of Bhi08G000088 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CG39\|A0A1S3CG39_CUCME	2.3e-63	98.47	syndetin OS=Cucumis melo OX=3656 GN=LOC103500532 PE=4 SV=1	[more]
tr\|A0A0A0LV98\|A0A0A0LV98_CUCSA	8.9e-63	97.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145910 PE=4 SV=1	[more]
tr\|A0A2P5DD37\|A0A2P5DD37_9ROSA	2.7e-51	83.97	Vacuolar protein sorting-associated protein 54, N-terminal OS=Trema orientalis O...	[more]
tr\|A0A2P5C2V1\|A0A2P5C2V1_PARAD	5.1e-50	82.44	Vacuolar protein sorting-associated protein 54, N-terminal OS=Parasponia anderso...	[more]
tr\|A0A2I4FQ37\|A0A2I4FQ37_9ROSI	1.6e-48	80.92	syndetin isoform X2 OS=Juglans regia OX=51240 GN=LOC109001080 PE=4 SV=1	[more]

BLAST of Bhi08G000088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462106.1	3.5e-63	98.47	PREDICTED: syndetin [Cucumis melo]	[more]
KGN64889.1	1.3e-62	97.71	hypothetical protein Csa_1G145910 [Cucumis sativus]	[more]
XP_011654226.1	1.3e-62	97.71	PREDICTED: coiled-coil domain-containing protein 132 isoform X1 [Cucumis sativus...	[more]
XP_022152901.1	1.3e-60	95.42	syndetin isoform X2 [Momordica charantia]	[more]
XP_022152900.1	1.3e-60	95.42	syndetin isoform X1 [Momordica charantia]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032456	endocytic recycling
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0008150	biological_process
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:1990745	EARP complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000088	Bhi08M000088	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000088	Csa1G145910	Cucumber (Chinese Long) v2	cuwgoB049
Bhi08G000088	MELO3C004810	Melon (DHL92) v3.5.1	mewgoB174
Bhi08G000088	ClCG01G012850	Watermelon (Charleston Gray)	wcgwgoB232
Bhi08G000088	CSPI01G14270	Wild cucumber (PI 183967)	cpiwgoB049
Bhi08G000088	Cucsa.200110	Cucumber (Gy14) v1	cgywgoB422
Bhi08G000088	CmaCh13G002760	Cucurbita maxima (Rimu)	cmawgoB0267
Bhi08G000088	CmaCh12G007960	Cucurbita maxima (Rimu)	cmawgoB0220
Bhi08G000088	CmoCh13G002850	Cucurbita moschata (Rifu)	cmowgoB0259
Bhi08G000088	CmoCh12G008060	Cucurbita moschata (Rifu)	cmowgoB0214
Bhi08G000088	Lsi03G000810	Bottle gourd (USVL1VR-Ls)	lsiwgoB337
Bhi08G000088	Cp4.1LG20g07520	Cucurbita pepo (Zucchini)	cpewgoB0636
Bhi08G000088	Cp4.1LG07g06560	Cucurbita pepo (Zucchini)	cpewgoB1055
Bhi08G000088	CsGy1G014200	Cucumber (Gy14) v2	cgybwgoB046
Bhi08G000088	MELO3C004814.2	Melon (DHL92) v3.6.1	medwgoB176
Bhi08G000088	Carg23689	Silver-seed gourd	carwgoB0216
Bhi08G000088	CsaV3_1G014440	Cucumber (Chinese Long) v3	cucwgoB051
Bhi08G000088	Cla001686	Watermelon (97103) v1	wgowmB512
Bhi08G000088	Cla97C01G011930	Watermelon (97103) v2	wgowmbB451

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None