Bhi08G000018 (gene) Wax gourd

NameBhi08G000018
Typegene
OrganismBenincasa hispida (Wax gourd)
Description1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic
Locationchr8 : 536308 .. 540469 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAACACTTCTCACCAATTTTGAGTCAGATGTATAAACAAGATGGGCTTACAGGCGGTCATGCCATCATGCTTGGAACAGATCTTTTGAGTATAGTTGCTGCCCTCGAAGCATTGCATGCCTATCCTGGTTTGTTCCTTTTTATTCTCTGTTTTTGTTTACCTTATCATGCTTAGTTCAACTATATTAATGATATTAGCTCATCTTGGGCAGTCATTGTTAGTCCTATTTATTTCTACTGTCATTTGGATTTTGTATCTACTTTTGGATATCTATAAATTTGTTCAACTTGGCATCTGAGTGAACATCAATATTTGTTTATGCTCTATTAAATTTCTTTTGGATATTGGTAATTTCCTTGAATTCTTGTAGTCGTGGTAGTTTTTTAGGATATTTTTGTGCTCATAGATTTAAAAATTTTCAGAACGTTCGTCAACATAATCTAATGCAAGAGGTGATGAAAAATGTAGGTGGCTTACAGGTTGGGGGTGTGGGATAAATTCAGAAAATGCTTCTAGTTATATTGAAGAAGAAGTTAGCCATGCCATTGTTATTTCAATAAGTTCTTTCCTTTTATCTATTTACGATGATATTGCTTAATGTATTGCCTGAAATGGAGGTAGTGTAACATGAATTTTGTAACACTGAATTTTGTTGAGTTATTGTAGTACTAGAATATAGAAGATAATAAAGATTTCATTTGGTCTTCAGTGAACTATTTTCGAACGGCCCACAATGGCTTTAAATGTTGTATGTTTCTTGGTTCTGTCGCAGTATGTGTTCAACAATGGACAAATGGATCTTACAAGACTTAAAGATCTTGTTCGCATTGTTGGAAAATAGAGGCTTGTGCTGTATCTTACTTCTTTTTGTATTATTGTTGCTAAGTTTAGAAGCTGTCATGATTGATTAACATCCTAAGTTATTGTTAACCCTTTAGATGTAAAAAATCACCCAAAGTCATCTAAATTGAAATGAACAAAACATCTTGCAGCTTGGAGCTTCACTAACATTTGTCTATGCTCATGCATTGATTAACATTTAGTTTCAATTTAGGAAGGTAAAATGCAATTGTGAGAGATAGATGGCAGAAGTTTAGTGATGTATTTCTGTGTTGTATTTGCTTTTAGTTACATACAATTTGAATCTAGTTCGTCTTTGGAATCTTGTTTGGATAATCTAGGATTAACTACCATCATGTCAAAAATTGACCCTCGATAGCATCTTTTAGTTGGAGATATTTTTTGTGGTTTCATTTGATTGAAGTCTTGTATCCATTAGTGTGCTTTTTAGATGCTTGAAGTTTTGGTGTTGTTTTAGGGGACTTTTTACTTTTTAGTTATATGGATAATGTAAAACTTTTTAGTTGGATATGCTAATTTCCTCCTTTCCTCTTTTATATGCTTATGCTTATGTTTTGGCATATTTTGGATTTTTATTATGTGATTTAAGCTTCTGTGTGGTTCCCTTGAAGACTTTGCAAATTTATTCTCGGTCTTCTTTGCAAATTCCCATGAAGACTCGAAATCAAAGATTTGAGAATTTATGTACATACGTATATGTGTGCAAAAATGTAATTGTTTAAATGTTGGTTGTTTAAATGATATCTCGACCTTCTATTTGGTTGTTTAAATGTTATCTTTTCATAGCTCCCTAGCTTGAATTTCATAATTTCTTTTGTGTGGGGTAGTTGAATTCTTATTATATGTTGTTTGCCTATTTTTCTCTGCTTGCAGGAAGTAATGCTTTCGATTTGGATCAAATCTGTGGTGGATGGTGGAGAGAACATAGCGAAGGAGCAATTGAAAAACTATTTGGAAAACTCTATATAATGCAACAAGTGTGTGTGCGCACTTTCGTTTTTATTTTTTATATTTTTATTTTGTGCGGGGGGGGGGGGGGGGGGGGGGGGGATGTTTACAAGTTTTAGTTTGTATTTTTATAGTTTAAAAGTAAGTTTTCACTCTTTTTTGATACCACCAATAAAAGTTGTTTGGATCTAAACAAAATTTAAATTTTGCTATGTAACCCTTATGAGTTTTGGTAATTTGTTGATTACCTTAGTTTTAGAGTTAAATTATCATCCAATTCCTCTTTTGTGACTTATTATTATGGATTTGTGAAAGCAATTAAGAATTTATTTTGTGCATGGACAGGTTGATTACCTTGGTTTTAGGGACATATCATTTTCAACTTTTTGACTGGCATTAAAAATGGATTTGACAATAATTATATTGAATACACGGACAATAATTGAAAAAAACGGACATGGTATTTACAAAAAAAGGACAATAATTGAAAAAATGGACAATGATTCTGGGATTTAATGTCGGTTTAAAACTGACATTAAAGGGCTTTAATGTCGGTTCGCAACCGACATTAAAGATAGTGTTATTAAAGCTCTTTAATGTCGGTTGTTTTTAATGTCGGTTTTAAACTGACATTGTACACCCTTTTCAATATCGGTTTAAAACCGACATTAAATACAACCGACGTTAAAGGGCTTTAATAACACTATCTTTAAAGTCGGTTGTCAACCGACATTTAAAGCCCATAATTCTTGTATTGTTGGTTCGAATAGTGTTATAAAAGGTCTTTAACATCGGTTGTCTTTAATGTCAATTTTAAATCGACATTATATATGACCAAGATTTCAATGTCAGTTATCTTAAATTTCAGTTTTCAACCAACATTTAATTATCTTAAATTTTAGTTTTAAAGCCCATAATACTTTTTGTTAATAATTGTCCGATATTAAATTTCTATCATTGTTTTGTCATTGAAAAAATAAAATAAAAATATATATTTATTGCTTTGCACAATAATATTTCTCTTTTATTTGTACATACCAAAAATAAAATCTTAATTGCTTTCACAAACTCCCAATAAGTCACAAAAGAAAAATGGATGATAATCTAAATCTTAAACATGTATAGCTTAGATGCTTGGTTTTTTCACATTCGTTGTTGAATATGTTGCTTTCAATATATTCGATGGAATGTCTACCCAAGATCTATAAGAGGCAATTGTAGTTGTGTGTTTGATGACTATCCCAGGATGCATTAATTACTAGCTTTGGAGAAATTTTTATTAATTGAGTAAACTATCTTAACAATTAATCAACGCAATTGAATCCTAGAATCTAATGCACATGTTTTCTATTCTATATGGTCGCTATCGAACCCAATAGAAGTAGGAGTATGTAGGTTGATTAGGGTTTGGCCTATCCAACCTTAATCGATGATTAGGATGCTATCTCGACTAGGTTATTGCTAGTTGTCGGCCTTTGTAGAGGCTAGCTTAATCGAGTTGAGCGAGTAGTTGCGAGCATAATCTGATTGTCAATAAACTTTTAGAATTCGATGATAGGAATTGCATTGAACATCGAACTTGAATTAGAAGCAAGATCATTCCTTACTTGTTTACATTCATCTTCTATCTTTTGATTTCTAGTACTTTTTGTTCAATTTTCTCAACCCCCATTTTATTGCTTTAATAATCATGGTTAGTTAAGAAAAGATAAGAATTAAAACATTCCCTGTGGATCGATCTCTTACTTCTACTTTAATTACGAATTAGTTAGGTTGTTGTTCGAGCTTTATAATTCGAGTTAGGTAGAACTAACGACACTTACTTAGCAACCGAACACCTATACTATATACCGTTTTGGCTATATACTCAAACTTAATCTACTTTTATGTCTCCACATATAGTTCAAGTATTCATGATATAAACAAGGGTTCTTTAGTTTATTGGATTTAGGGTTAAAAATGTGCTATTCACATATTCACATACTCAATACAACTTTATTGTAAAATATAATATGTTTAATATTTACAAACCACGAGTTTTAAGACATAAAACCCAACAGGTTGGTGTTCAAACTCACTTAATGTTGCATATGTAGAGTCATTAGGAAGTGGGTATTTCAAATCCGATGTCGAAACTTAAAGAGTAAGTGTTAAAACGCGCCGAATAGGAAAAAACGCTACTGTTGTCGTCGTCAGAGTAGCACCATCATCGTATTGTTTGCATTCGTTGTAGCAAAACACTACTGTTGTACTATTCGCATTTACTGGAGAAGCACAATCGTTGTTGCTCGCTTGTGGTTTCTATACCACCATTGATCATTGCAGGGTCATGGGTGTGTTTGTCTGA

mRNA sequence

ATGGATCAACACTTCTCACCAATTTTGAGTCAGATGTATAAACAAGATGGGCTTACAGGCGGTCATGCCATCATGCTTGGAACAGATCTTTTGAGTATAGTTGCTGCCCTCGAAGCATTGCATGCCTATCCTGGAAGTAATGCTTTCGATTTGGATCAAATCTGTGGTGGATGGTGGAGAGAACATAGCGAAGGAGCAATTGAAAAACTATTTGGAAAACTCTATATAATGCAACAACAAAACACTACTGTTGTACTATTCGCATTTACTGGAGAAGCACAATCGTTGTTGCTCGCTTGTGGTTTCTATACCACCATTGATCATTGCAGGGTCATGGGTGTGTTTGTCTGA

Coding sequence (CDS)

ATGGATCAACACTTCTCACCAATTTTGAGTCAGATGTATAAACAAGATGGGCTTACAGGCGGTCATGCCATCATGCTTGGAACAGATCTTTTGAGTATAGTTGCTGCCCTCGAAGCATTGCATGCCTATCCTGGAAGTAATGCTTTCGATTTGGATCAAATCTGTGGTGGATGGTGGAGAGAACATAGCGAAGGAGCAATTGAAAAACTATTTGGAAAACTCTATATAATGCAACAACAAAACACTACTGTTGTACTATTCGCATTTACTGGAGAAGCACAATCGTTGTTGCTCGCTTGTGGTTTCTATACCACCATTGATCATTGCAGGGTCATGGGTGTGTTTGTCTGA

Protein sequence

MDQHFSPILSQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEKLFGKLYIMQQQNTTVVLFAFTGEAQSLLLACGFYTTIDHCRVMGVFV
BLAST of Bhi08G000018 vs. Swiss-Prot
Match: sp|O82782|HIS3_ARATH (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN3 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           ++MYK+DGLTGGH IMLG D LS  AA+ ALHAYPG       Q+ GG   E+    IE+
Sbjct: 89  AKMYKEDGLTGGHVIMLGADPLSQAAAIGALHAYPGGL-----QVGGGINSENCMSYIEE 143

BLAST of Bhi08G000018 vs. TAIR10
Match: AT2G36230.1 (Aldolase-type TIM barrel family protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           ++MYK+DGLTGGH IMLG D LS  AA+ ALHAYPG       Q+ GG   E+    IE+
Sbjct: 89  AKMYKEDGLTGGHVIMLGADPLSQAAAIGALHAYPGGL-----QVGGGINSENCMSYIEE 143

BLAST of Bhi08G000018 vs. TrEMBL
Match: tr|A0A1S3CBT6|A0A1S3CBT6_CUCME (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498684 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 97  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 151

BLAST of Bhi08G000018 vs. TrEMBL
Match: tr|A0A1S3CAP5|A0A1S3CAP5_CUCME (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498684 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 97  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 151

BLAST of Bhi08G000018 vs. TrEMBL
Match: tr|A0A1S3CA44|A0A1S3CA44_CUCME (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498684 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 51  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 105

BLAST of Bhi08G000018 vs. TrEMBL
Match: tr|A0A1U8PYX4|A0A1U8PYX4_NELNU (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104588671 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-07
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPG 46
           + +YKQDGLTGGH IMLG D LSI AA+EALHAYPG
Sbjct: 101 ANLYKQDGLTGGHVIMLGADALSISAAIEALHAYPG 136

BLAST of Bhi08G000018 vs. TrEMBL
Match: tr|A0A1U7YZE4|A0A1U7YZE4_NELNU (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104588671 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-07
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPG 46
           + +YKQDGLTGGH IMLG D LSI AA+EALHAYPG
Sbjct: 109 ANLYKQDGLTGGHVIMLGADALSISAAIEALHAYPG 144

BLAST of Bhi08G000018 vs. NCBI nr
Match: XP_008459605.1 (PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X1 [Cucumis melo] >XP_016902441.1 PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 97  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 151

BLAST of Bhi08G000018 vs. NCBI nr
Match: XP_008459606.1 (PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 51  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 105

BLAST of Bhi08G000018 vs. NCBI nr
Match: XP_008459607.1 (PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGL GGHAIMLG D LS+VAALEALHAYPG       Q+ GG   E++   IE+
Sbjct: 97  ANLYKQDGLAGGHAIMLGADPLSVVAALEALHAYPGGL-----QVGGGINPENASSYIEE 151

BLAST of Bhi08G000018 vs. NCBI nr
Match: XP_022132363.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGLTGGH IMLG D LSI AALEAL+AYPGS      Q+ GG   E+S   IEK
Sbjct: 98  ANLYKQDGLTGGHVIMLGADPLSIDAALEALNAYPGSL-----QVGGGINSENSSSYIEK 152

BLAST of Bhi08G000018 vs. NCBI nr
Match: XP_022926064.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 66.6 bits (161), Expect = 6.2e-08
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 10  SQMYKQDGLTGGHAIMLGTDLLSIVAALEALHAYPGSNAFDLDQICGGWWREHSEGAIEK 69
           + +YKQDGLTGGHAIMLG D LSI AA+EALHAYPG       Q+ GG   E++   IE+
Sbjct: 97  ANLYKQDGLTGGHAIMLGADPLSIAAAIEALHAYPGGL-----QVGGGINSENASRYIEE 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|O82782|HIS3_ARATH3.3e-0853.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
Match NameE-valueIdentityDescription
AT2G36230.11.8e-0953.33Aldolase-type TIM barrel family protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3CBT6|A0A1S3CBT6_CUCME3.2e-0858.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
tr|A0A1S3CAP5|A0A1S3CAP5_CUCME3.2e-0858.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
tr|A0A1S3CA44|A0A1S3CA44_CUCME3.2e-0858.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
tr|A0A1U8PYX4|A0A1U8PYX4_NELNU4.6e-0777.781-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
tr|A0A1U7YZE4|A0A1U7YZE4_NELNU4.6e-0777.781-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
Match NameE-valueIdentityDescription
XP_008459605.14.8e-0858.33PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imid... [more]
XP_008459606.14.8e-0858.33PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imid... [more]
XP_008459607.14.8e-0858.33PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imid... [more]
XP_022132363.14.8e-0861.671-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
XP_022926064.16.2e-0858.331-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000105 histidine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000018Bhi08M000018mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None