Bhi07G001515 (gene) Wax gourd

NameBhi07G001515
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr7 : 50980200 .. 50980511 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACGAGCTTGACCAATACGAATAGTAATACCGAGACTGAGATTGCTAGCAAGAGCAACAACTGTTCTAGTGTGAACGAAAATGATGACGTTGTTGAGATTAGCATGCCTCCACCAGAACTACAACTAGCTCGAAAGAAGAGGAAATTTACTAAATGCTCTGAGTATAGTGATGATGATCCACATGCTAAATGTAATTATTGTAGTATGGTGTATTCATCTCATCCAAGAAGGAACGAAAATTCAACTATGAGAATGCATCTTGAACATTACTGTAAAAACAAATCCTTATCAGATAAAAGACAGTAA

mRNA sequence

ATGTCAACGAGCTTGACCAATACGAATAGTAATACCGAGACTGAGATTGCTAGCAAGAGCAACAACTGTTCTAGTGTGAACGAAAATGATGACGTTGTTGAGATTAGCATGCCTCCACCAGAACTACAACTAGCTCGAAAGAAGAGGAAATTTACTAAATGCTCTGAGTATAGTGATGATGATCCACATGCTAAATGTAATTATTGTAGTATGGTGTATTCATCTCATCCAAGAAGGAACGAAAATTCAACTATGAGAATGCATCTTGAACATTACTGTAAAAACAAATCCTTATCAGATAAAAGACAGTAA

Coding sequence (CDS)

ATGTCAACGAGCTTGACCAATACGAATAGTAATACCGAGACTGAGATTGCTAGCAAGAGCAACAACTGTTCTAGTGTGAACGAAAATGATGACGTTGTTGAGATTAGCATGCCTCCACCAGAACTACAACTAGCTCGAAAGAAGAGGAAATTTACTAAATGCTCTGAGTATAGTGATGATGATCCACATGCTAAATGTAATTATTGTAGTATGGTGTATTCATCTCATCCAAGAAGGAACGAAAATTCAACTATGAGAATGCATCTTGAACATTACTGTAAAAACAAATCCTTATCAGATAAAAGACAGTAA

Protein sequence

MSTSLTNTNSNTETEIASKSNNCSSVNENDDVVEISMPPPELQLARKKRKFTKCSEYSDDDPHAKCNYCSMVYSSHPRRNENSTMRMHLEHYCKNKSLSDKRQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR003656Znf_BED
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M001515Bhi07M001515mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003656Zinc finger, BED-typePFAMPF02892zf-BEDcoord: 60..94
e-value: 1.7E-4
score: 21.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi07G001515Wax gourdwgowgoB089
Bhi07G001515Cucumber (Gy14) v1cgywgoB087
Bhi07G001515Cucumber (Gy14) v1cgywgoB788
Bhi07G001515Cucumber (Gy14) v2cgybwgoB189
Bhi07G001515Cucumber (Gy14) v2cgybwgoB486
Bhi07G001515Cucurbita maxima (Rimu)cmawgoB0222
Bhi07G001515Cucurbita maxima (Rimu)cmawgoB0543
Bhi07G001515Cucurbita maxima (Rimu)cmawgoB0891
Bhi07G001515Cucurbita moschata (Rifu)cmowgoB0215
Bhi07G001515Cucurbita moschata (Rifu)cmowgoB0539
Bhi07G001515Cucurbita moschata (Rifu)cmowgoB0890
Bhi07G001515Cucurbita pepo (Zucchini)cpewgoB0054
Bhi07G001515Cucurbita pepo (Zucchini)cpewgoB0555
Bhi07G001515Cucurbita pepo (Zucchini)cpewgoB1058
Bhi07G001515Wild cucumber (PI 183967)cpiwgoB197
Bhi07G001515Wild cucumber (PI 183967)cpiwgoB516
Bhi07G001515Cucumber (Chinese Long) v3cucwgoB203
Bhi07G001515Cucumber (Chinese Long) v3cucwgoB523
Bhi07G001515Cucumber (Chinese Long) v2cuwgoB197
Bhi07G001515Cucumber (Chinese Long) v2cuwgoB512
Bhi07G001515Bottle gourd (USVL1VR-Ls)lsiwgoB380
Bhi07G001515Bottle gourd (USVL1VR-Ls)lsiwgoB620
Bhi07G001515Melon (DHL92) v3.6.1medwgoB071
Bhi07G001515Melon (DHL92) v3.6.1medwgoB364
Bhi07G001515Melon (DHL92) v3.5.1mewgoB072
Bhi07G001515Melon (DHL92) v3.5.1mewgoB363
Bhi07G001515Watermelon (Charleston Gray)wcgwgoB174
Bhi07G001515Watermelon (Charleston Gray)wcgwgoB649
Bhi07G001515Watermelon (97103) v2wgowmbB522
Bhi07G001515Watermelon (97103) v2wgowmbB543
Bhi07G001515Watermelon (97103) v1wgowmB540
Bhi07G001515Watermelon (97103) v1wgowmB568
Bhi07G001515Silver-seed gourdcarwgoB0312
Bhi07G001515Silver-seed gourdcarwgoB0744
Bhi07G001515Silver-seed gourdcarwgoB0811