Bhi07G000474 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000474
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	40S ribosomal protein S4
Location	chr7 : 21825951 .. 21828068 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCCCAAAAATCTTCCTAGTCCTCTTCCTCTTCCTCTATGAATAGCCTAGGGTTTTAACATTACCATCTCTCTTCCTTCTTAAGCTTGTAGCTCTCTACTCGTGCGGCGGCCGGCGATCATCTCCGTGGAACACTCAGTTTCGACAATATGGTTAGTGGATCCGTGGATGATAGTTTAATCGATAAGTTTTCGGATGAAATTAATGTGTTCTATGGGTTTGACAGGCTAGAGGTTTGAAGAAACACTTGAAGAGGCTGAATGCTCCGAAGCATTGGATGCTGGACAAACTTGGTGGTGCATTTGTGAGTGAAATTTTACTAGTCTTCGTTTTTGTTTGCTTTTATTTCTGTCGTTTTGCTGATGAATCCCATTTGTAGGCCCCCAAACCTTCATCAGGACCTCATAAATCGAGGGAATGTCTCCCATTGATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCTATTTTGATGCAACGCCATGTTTTAGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGCTTCATGGGTATGCTCATCTCATCTCAAACTCAATATTAGTTTTGTTTGAATAATTGGGTGTTAGATTCTTCTGTGATCTAAATTAGGGAGGAGTGTGAGTATGGAGTTTGAACTTTTGCTTCAATGCTCACTTCCAGCATTTTCCTCTCCATATTCTTAATGGAAGTCAAAAAAATTTTAAATCAGTCCTTTTACCATAAAACCTACTGTCTCATACAAATGGGGAACTTTATCACCACACTTACCATTTGCTGCAAATAAGACACTAACAGTCACTTGATTTGTTCTTTTTGTTATAGATGTTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCCAAGGTTTGCTATTTGACTTATTATTTGTTCAAACAATTCTGTTTATAGAATCAGAATGATTGTATGCTGCTCAGGAAAATATCATTTTCGTTAAACCATTCTGAATTTTTCTATATCACTTCTGCAAGTCAGCTGTTTTCCCCATTTGGTTAACATCTGTTAGGCCACTGATTATCCATCAATATAAGATGAGGCAAGTTAGTAGCGTGGGAATGATGTACGGTTTAGGAATGTCAGCATTGTAGAGTGTGAACGCGAGTGAATTGGGGAGGGTCTGATCTTTTTCATTTTATGTTTTTGGTATTAGAGTACTTGTATTGCCTTAGGCAAGTTTCATTTTCAATATCAATACATAGTGAGGGTGATCCTTACAATGTCATTTGATGTGCTCTTTGCAGTTCAAGCTCTGTAAGGTTCGCTCGGTGCAGTTTGGGCAGAAGGGAATCCCTTTTCTGAATACTTATGATGGACGTACAATCCGTTACCCCGACCCCCTCATCAAGGCAAACGACACCATCAAGTTAGACCTTGAGTCAAACAAAATCGCTGATTTCATTAAGTTCGATGTAGGAAACGTCGTGATGGTGACCGGTGGAAGAAACAGAGGCCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAAACAATTCACATTCAGGATGCAACCGGGCACGAATTTGCCACTAGGCTTGGCAATGTGTTTACAATCGGGAAGGGAACAAAGCCGTGGGTGTCCCTCCCCAAGGGCAAAGGTATTAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCAAGCCAAGCAGCAGTTACTGCTTAAGAATTTTGAGTTGATACTAAATTGTAGTCATGAGTTTTTCTTAATCGTTTTTGATATTCACATCCTTCTCGAATTTTGCTCGCTTGTTATTTATGTCTAAGTTTTTGTCTTTTGAGACAATTTATTTCCACCGGAGATATTGGTGAGGCCGTTGCTTCTAGGATTTTGTTGTTAAAAAACACTGATAGCTGATTTATTAGTTGTGTTGTAACCCTGCTCTATAGCCTCGATTGTTATTATCTATAGTCAAATTTCTCAACGTCTTTGAATAGATGTAAATATTAGTATTTAAGGTAAAATGCACTATTGGTCTAAATGCTCGAGGTTTGATTATTTG

mRNA sequence

CCAGCCCAAAAATCTTCCTAGTCCTCTTCCTCTTCCTCTATGAATAGCCTAGGGTTTTAACATTACCATCTCTCTTCCTTCTTAAGCTTGTAGCTCTCTACTCGTGCGGCGGCCGGCGATCATCTCCGTGGAACACTCAGTTTCGACAATATGGCTAGAGGTTTGAAGAAACACTTGAAGAGGCTGAATGCTCCGAAGCATTGGATGCTGGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCAGGACCTCATAAATCGAGGGAATGTCTCCCATTGATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCTATTTTGATGCAACGCCATGTTTTAGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGCTTCATGGATGTTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCCAAGTTCAAGCTCTGTAAGGTTCGCTCGGTGCAGTTTGGGCAGAAGGGAATCCCTTTTCTGAATACTTATGATGGACGTACAATCCGTTACCCCGACCCCCTCATCAAGGCAAACGACACCATCAAGTTAGACCTTGAGTCAAACAAAATCGCTGATTTCATTAAGTTCGATGTAGGAAACGTCGTGATGGTGACCGGTGGAAGAAACAGAGGCCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAAACAATTCACATTCAGGATGCAACCGGGCACGAATTTGCCACTAGGCTTGGCAATGTGTTTACAATCGGGAAGGGAACAAAGCCGTGGGTGTCCCTCCCCAAGGGCAAAGGTATTAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCAAGCCAAGCAGCAGTTACTGCTTAAGAATTTTGAGTTGATACTAAATTGTAGTCATGAGTTTTTCTTAATCGTTTTTGATATTCACATCCTTCTCGAATTTTGCTCGCTTGTTATTTATGTCTAAGTTTTTGTCTTTTGAGACAATTTATTTCCACCGGAGATATTGGTGAGGCCGTTGCTTCTAGGATTTTGTTGTTAAAAAACACTGATAGCTGATTTATTAGTTGTGTTGTAACCCTGCTCTATAGCCTCGATTGTTATTATCTATAGTCAAATTTCTCAACGTCTTTGAATAGATGTAAATATTAGTATTTAAGGTAAAATGCACTATTGGTCTAAATGCTCGAGGTTTGATTATTTG

Coding sequence (CDS)

ATGGCTAGAGGTTTGAAGAAACACTTGAAGAGGCTGAATGCTCCGAAGCATTGGATGCTGGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCAGGACCTCATAAATCGAGGGAATGTCTCCCATTGATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCTATTTTGATGCAACGCCATGTTTTAGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGCTTCATGGATGTTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCCAAGTTCAAGCTCTGTAAGGTTCGCTCGGTGCAGTTTGGGCAGAAGGGAATCCCTTTTCTGAATACTTATGATGGACGTACAATCCGTTACCCCGACCCCCTCATCAAGGCAAACGACACCATCAAGTTAGACCTTGAGTCAAACAAAATCGCTGATTTCATTAAGTTCGATGTAGGAAACGTCGTGATGGTGACCGGTGGAAGAAACAGAGGCCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAAACAATTCACATTCAGGATGCAACCGGGCACGAATTTGCCACTAGGCTTGGCAATGTGTTTACAATCGGGAAGGGAACAAAGCCGTGGGTGTCCCTCCCCAAGGGCAAAGGTATTAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCAAGCCAAGCAGCAGTTACTGCTTAA

Protein sequence

MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

Homology

[Close]

BLAST of Bhi07G000474 vs. Swiss-Prot
Match: sp|Q8VYK6|RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 506.1 bits (1302), Expect = 2.3e-142
Identity = 244/261 (93.49%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of Bhi07G000474 vs. Swiss-Prot
Match: sp|P49204|RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 505.8 bits (1301), Expect = 3.0e-142
Identity = 244/261 (93.49%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of Bhi07G000474 vs. Swiss-Prot
Match: sp|P46300|RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 5.1e-142
Identity = 243/264 (92.05%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]

BLAST of Bhi07G000474 vs. Swiss-Prot
Match: sp|Q93VH9|RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.5e-141
Identity = 242/261 (92.72%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of Bhi07G000474 vs. Swiss-Prot
Match: sp|P46299|RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 6.2e-140
Identity = 244/261 (93.49%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH+I  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
            KGIKLSIIEEARKRLA+Q A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]

BLAST of Bhi07G000474 vs. TAIR10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 506.1 bits (1302), Expect = 1.3e-143
Identity = 244/261 (93.49%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of Bhi07G000474 vs. TAIR10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 505.8 bits (1301), Expect = 1.7e-143
Identity = 244/261 (93.49%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of Bhi07G000474 vs. TAIR10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 503.4 bits (1295), Expect = 8.2e-143
Identity = 242/261 (92.72%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIP+LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of Bhi07G000474 vs. TrEMBL
Match: tr|A0A1S3BZK5|A0A1S3BZK5_CUCME (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.9e-146
Identity = 261/264 (98.86%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. TrEMBL
Match: tr|A0A0A0KQK7|A0A0A0KQK7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 4.3e-146
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]

BLAST of Bhi07G000474 vs. TrEMBL
Match: tr|A0A0A0K4K7|A0A0A0K4K7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.8e-145
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. TrEMBL
Match: tr|A0A1S3CEH5|A0A1S3CEH5_CUCME (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500053 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.8e-145
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVS+PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSVPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. TrEMBL
Match: tr|A0A1S3CEL9|A0A1S3CEL9_CUCME (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500084 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.8e-145
Identity = 256/264 (96.97%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. NCBI nr
Match: XP_008454823.1 (PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo])

HSP 1 Score: 527.3 bits (1357), Expect = 2.9e-146
Identity = 261/264 (98.86%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. NCBI nr
Match: XP_022146851.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 2.9e-146
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKG+KLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGVKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. NCBI nr
Match: XP_011655007.1 (PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus] >KGN50688.1 hypothetical protein Csa_5G212590 [Cucumis sativus] >KGN50692.1 hypothetical protein Csa_5G215120 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 6.5e-146
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]

BLAST of Bhi07G000474 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 526.2 bits (1354), Expect = 6.5e-146
Identity = 259/264 (98.11%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of Bhi07G000474 vs. NCBI nr
Match: XP_022136787.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 525.8 bits (1353), Expect = 8.6e-146
Identity = 258/264 (97.73%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGQFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLE+NK+ADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKVADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

The following BLAST results are available for this feature:

BLAST of Bhi07G000474 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VYK6\|RS43_ARATH	2.3e-142	93.49	40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2	[more]
sp\|P49204\|RS42_ARATH	3.0e-142	93.49	40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4	[more]
sp\|P46300\|RS4_SOLTU	5.1e-142	92.05	40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1	[more]
sp\|Q93VH9\|RS41_ARATH	1.5e-141	92.72	40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1	[more]
sp\|P46299\|RS4_GOSHI	6.2e-140	93.49	40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1	[more]

BLAST of Bhi07G000474 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58420.1	1.3e-143	93.49	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.1	1.7e-143	93.49	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.1	8.2e-143	92.72	Ribosomal protein S4 (RPS4A) family protein	[more]

BLAST of Bhi07G000474 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZK5\|A0A1S3BZK5_CUCME	1.9e-146	98.86	40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1	[more]
tr\|A0A0A0KQK7\|A0A0A0KQK7_CUCSA	4.3e-146	98.48	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1	[more]
tr\|A0A0A0K4K7\|A0A0A0K4K7_CUCSA	2.8e-145	97.35	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1	[more]
tr\|A0A1S3CEH5\|A0A1S3CEH5_CUCME	4.8e-145	97.35	40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500053 PE=3 SV=1	[more]
tr\|A0A1S3CEL9\|A0A1S3CEL9_CUCME	4.8e-145	96.97	40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500084 PE=3 SV=1	[more]

BLAST of Bhi07G000474 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454823.1	2.9e-146	98.86	PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: ...	[more]
XP_022146851.1	2.9e-146	98.11	40S ribosomal protein S4-3-like [Momordica charantia]	[more]
XP_011655007.1	6.5e-146	98.48	PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 PREDICTE...	[more]
XP_022132117.1	6.5e-146	98.11	40S ribosomal protein S4-3 [Momordica charantia]	[more]
XP_022136787.1	8.6e-146	97.73	40S ribosomal protein S4-3-like [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR018199	Ribosomal_S4e_N_CS
IPR038237	Ribosomal_S4e_central_sf
IPR000876	Ribosomal_S4e
IPR013845	Ribosomal_S4e_central_region
IPR032277	40S_S4_C
IPR013843	Ribosomal_S4e_N
IPR014722	Rib_L2_dom2
IPR005824	KOW
IPR002942	S4_RNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000474	Bhi07M000474	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 42..106 e-value: 0.0032 score: 26.7
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 47..90 e-value: 2.6E-5 score: 23.7
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 51..112 e-value: 2.1623E-4 score: 37.229
IPR005824	KOW	SMART	SM00739	kow_9	coord: 174..201 e-value: 7.7E-4 score: 28.8
IPR005824	KOW	PFAM	PF00467	KOW	coord: 177..210 e-value: 1.5E-6 score: 27.9
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 175..245 e-value: 4.5E-38 score: 130.9
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 3..39 e-value: 1.8E-19 score: 69.5
IPR032277	40S ribosomal protein S4, C-terminal domain	PFAM	PF16121	40S_S4_C	coord: 212..258 e-value: 1.5E-26 score: 91.6
IPR013845	Ribosomal protein S4e, central region	PFAM	PF00900	Ribosomal_S4e	coord: 95..169 e-value: 3.2E-36 score: 123.0
IPR013845	Ribosomal protein S4e, central region	PRODOM	PD002667		coord: 87..176 e-value: 3.0E-46 score: 467.0
None	No IPR available	GENE3D	G3DSA:3.10.290.40		coord: 1..117 e-value: 1.7E-60 score: 204.0
None	No IPR available	PANTHER	PTHR11581:SF11	SUBFAMILY NOT NAMED	coord: 1..261
None	No IPR available	CDD	cd06087	KOW_RPS4	coord: 175..229 e-value: 6.54228E-30 score: 107.216
IPR000876	Ribosomal protein S4e	PIRSF	PIRSF002116	RPS4a_RPS4e	coord: 1..241 e-value: 1.1E-96 score: 320.6
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 1..261
IPR000876	Ribosomal protein S4e	HAMAP	MF_00485	Ribosomal_S4e	coord: 7..238 score: 36.062
IPR038237	Ribosomal protein S4e, central domain superfamily	GENE3D	G3DSA:2.40.50.740		coord: 122..172 e-value: 3.0E-30 score: 105.8
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 8..22

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000474	Cucumber (Gy14) v1	cgywgoB275
Bhi07G000474	Cucumber (Gy14) v2	cgybwgoB487
Bhi07G000474	Cucumber (Gy14) v2	cgybwgoB610
Bhi07G000474	Cucurbita maxima (Rimu)	cmawgoB0705
Bhi07G000474	Cucurbita maxima (Rimu)	cmawgoB0770
Bhi07G000474	Cucurbita maxima (Rimu)	cmawgoB0889
Bhi07G000474	Cucurbita maxima (Rimu)	cmawgoB0890
Bhi07G000474	Cucurbita moschata (Rifu)	cmowgoB0698
Bhi07G000474	Cucurbita moschata (Rifu)	cmowgoB0762
Bhi07G000474	Cucurbita moschata (Rifu)	cmowgoB0888
Bhi07G000474	Cucurbita moschata (Rifu)	cmowgoB0889
Bhi07G000474	Cucurbita pepo (Zucchini)	cpewgoB0553
Bhi07G000474	Cucurbita pepo (Zucchini)	cpewgoB0554
Bhi07G000474	Cucurbita pepo (Zucchini)	cpewgoB0969
Bhi07G000474	Wild cucumber (PI 183967)	cpiwgoB517
Bhi07G000474	Wild cucumber (PI 183967)	cpiwgoB648
Bhi07G000474	Cucumber (Chinese Long) v3	cucwgoB524
Bhi07G000474	Cucumber (Chinese Long) v3	cucwgoB661
Bhi07G000474	Cucumber (Chinese Long) v2	cuwgoB513
Bhi07G000474	Cucumber (Chinese Long) v2	cuwgoB641
Bhi07G000474	Bottle gourd (USVL1VR-Ls)	lsiwgoB096
Bhi07G000474	Bottle gourd (USVL1VR-Ls)	lsiwgoB381
Bhi07G000474	Melon (DHL92) v3.6.1	medwgoB073
Bhi07G000474	Melon (DHL92) v3.5.1	mewgoB075
Bhi07G000474	Watermelon (Charleston Gray)	wcgwgoB596
Bhi07G000474	Watermelon (97103) v2	wgowmbB538
Bhi07G000474	Watermelon (97103) v1	wgowmB548
Bhi07G000474	Watermelon (97103) v1	wgowmB562
Bhi07G000474	Silver-seed gourd	carwgoB0103
Bhi07G000474	Silver-seed gourd	carwgoB0627
Bhi07G000474	Silver-seed gourd	carwgoB0785
Bhi07G000474	Wax gourd	wgowgoB105