Bhi07G000047 (gene) Wax gourd

Overview
NameBhi07G000047
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCalcium-binding EF-hand
Locationchr7 : 2795086 .. 2795704 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGATTTTTTGAGCTACATAAACACGAATTTTATGTACTAAAGTAAATTTGCATTTTCAAGTCAAC

mRNA sequence

ATTCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGATTTTTTGAGCTACATAAACACGAATTTTATGTACTAAAGTAAATTTGCATTTTCAAGTCAAC

Coding sequence (CDS)

TCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGA

Protein sequence

SPRNKDSTITIMCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDHVALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK
Homology
[Close]
BLAST of Bhi07G000047 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 41.2 bits (95), Expect = 8.1e-04
Identity = 19/67 (28.36%), Postives = 37/67 (55.22%), Query Frame = 0 

Query: 108 QFSREQIKEIFQYHDSDNDGFLNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISE 167
           Q S+E+++++F + DSD DG ++  E+   FG +G  +    A   +   DT+ DG +  
Sbjct: 59  QASKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGF 118

Query: 168 DELEKLI 175
           ++   L+
Sbjct: 119 EDFVGLM 125

[Close]
BLAST of Bhi07G000047 vs. TrEMBL
Match: tr|A0A0A0KLF3|A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 6.2e-59
Identity = 123/173 (71.10%), Postives = 136/173 (78.61%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ+  AKYEA+KL+KK+E+NGEGV L   N  ARGSTQIN N+ M TK LK ND 
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K SSN  +K N QI GKA VP  RV D KAS MQFSREQIKEIFQY+DSD DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +EVTKAF  LGSI PF KAYHGMVYADTN DGLI EDEL+KLI+YA KF+ KK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Bhi07G000047 vs. TrEMBL
Match: tr|A0A0A0KIY4|A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.4e-57
Identity = 122/176 (69.32%), Postives = 140/176 (79.55%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETK-ILKAND 71
           M I  LQV  AKYEA+KL+KKHE N EGV LK  N I   ST+INN Q M T+ ILK ++
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 72  H-VALKFSSNVHIKPNKQIG-GKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGF 131
           H VA   +SN ++ P+KQ+G GKA V T+ VLDIKAS MQFSREQIKEIFQYHDSDNDGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 132 LNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           LN++EVTKAF FLG+ILP YKAYHGMVYAD N DGLIS+DELEKL+DYA KF NK+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]
BLAST of Bhi07G000047 vs. TrEMBL
Match: tr|A0A0A0KMQ1|A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M I +LQ  MA YEA+ L+K++EKNG+ VK+K  + + R STQI N + +  KILK +D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESV-LKILKPSDG 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K  S  HI+P ++ GGK     +RVLD K+S M  SRE+IKEIFQYHD++NDGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
            E+TKAF FLGS+ PFYKA +GMVYAD N DGLISE EL+KLIDYA K I KK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Bhi07G000047 vs. TrEMBL
Match: tr|A0A0A0LRC8|A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.3e-35
Identity = 90/178 (50.56%), Postives = 121/178 (67.98%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGV----KLKRLNAIARGSTQINNNQGMETK-IL 71
           M +  LQ   AK EAN+L+KK+++NG+GV    +L+     ARGSTQ+NN + + +  + 
Sbjct: 1   MSVSHLQA-WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 72  KANDHVALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDND 131
           K N+++A K SSN  I P KQ+  KA   +      K S +  SREQIKEIF+YHDS+ D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKD 120

Query: 132 GFLNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           GFL+I+E+TKAF  +GSI+PF KA + M YAD + DGL+SE EL+KLIDYA K I KK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]
BLAST of Bhi07G000047 vs. TrEMBL
Match: tr|A0A1S3BDW2|A0A1S3BDW2_CUCME (probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.7e-33
Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLK-RLNAIARGSTQINNNQGMETKILKAND 71
           M +  LQ   AK EA++L+KK+++NG+GV  K  L +    +   N      + I K N+
Sbjct: 1   MSVSHLQA-WAKIEASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIPKTNE 60

Query: 72  HVALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLN 131
           ++  K SSN  IKP KQ+  KA         ++ S +  SREQIKEIF+YHDS+ DGFL+
Sbjct: 61  NLDQKVSSNTRIKPKKQLLDKAQD------SLRQSNVPLSREQIKEIFKYHDSNKDGFLS 120

Query: 132 IKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           I+E+TKAFG LGSI+PF KA H M YAD + DGLISE EL KLIDYA K I KK
Sbjct: 121 IRELTKAFGSLGSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

[Close]
BLAST of Bhi07G000047 vs. NCBI nr
Match: KGN49689.1 (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 9.4e-59
Identity = 123/173 (71.10%), Postives = 136/173 (78.61%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ+  AKYEA+KL+KK+E+NGEGV L   N  ARGSTQIN N+ M TK LK ND 
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K SSN  +K N QI GKA VP  RV D KAS MQFSREQIKEIFQY+DSD DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +EVTKAF  LGSI PF KAYHGMVYADTN DGLI EDEL+KLI+YA KF+ KK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Bhi07G000047 vs. NCBI nr
Match: KGN49690.1 (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 5.2e-57
Identity = 122/176 (69.32%), Postives = 140/176 (79.55%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETK-ILKAND 71
           M I  LQV  AKYEA+KL+KKHE N EGV LK  N I   ST+INN Q M T+ ILK ++
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 72  H-VALKFSSNVHIKPNKQIG-GKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGF 131
           H VA   +SN ++ P+KQ+G GKA V T+ VLDIKAS MQFSREQIKEIFQYHDSDNDGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 132 LNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           LN++EVTKAF FLG+ILP YKAYHGMVYAD N DGLIS+DELEKL+DYA KF NK+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]
BLAST of Bhi07G000047 vs. NCBI nr
Match: KGN49687.1 (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 3.1e-46
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M I +LQ  MA YEA+ L+K++EKNG+ VK+K  + + R STQI N + +  KILK +D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESV-LKILKPSDG 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K  S  HI+P ++ GGK     +RVLD K+S M  SRE+IKEIFQYHD++NDGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
            E+TKAF FLGS+ PFYKA +GMVYAD N DGLISE EL+KLIDYA K I KK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Bhi07G000047 vs. NCBI nr
Match: XP_023530739.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 101/173 (58.38%), Postives = 125/173 (72.25%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ  MAKYEA++++KK+ +NG+ V+LK  N IAR STQ+ NNQGM  +IL+ N +
Sbjct: 1   MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQV-NNQGMVPEILRDNKN 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           V  KFSSN H                    +KAS MQFSRE++KEIF+YHDSD DGFLNI
Sbjct: 61  VGPKFSSNTH--------------------LKASNMQFSREKMKEIFRYHDSDKDGFLNI 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +E+TKAF FLGSI+PF KA +GM YAD N DGLISE EL+KL+DYA KF+ KK
Sbjct: 121 RELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFMKKK 152

[Close]
BLAST of Bhi07G000047 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 102/173 (58.96%), Postives = 123/173 (71.10%), Query Frame = 0 

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ  MAKYEA++++KK  +NG+ V+LK  N IAR STQ+ NNQ M  +IL+ N +
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQV-NNQSMVPEILRDNKN 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           V  KFSSN H                    +KAS MQFSREQ+KEIF+YHDSD DGFLNI
Sbjct: 61  VGPKFSSNTH--------------------LKASNMQFSREQMKEIFRYHDSDKDGFLNI 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +E+TKAF FLGSI+PF KA +GM YAD N DGLISE EL+KL+DYA KFI KK
Sbjct: 121 RELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

The following BLAST results are available for this feature:
BLAST of Bhi07G000047 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi07G000047 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50770.18.1e-0428.36calmodulin-like 41[more]
BLAST of Bhi07G000047 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLF3|A0A0A0KLF3_CUCSA6.2e-5971.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1[more]
tr|A0A0A0KIY4|A0A0A0KIY4_CUCSA3.4e-5769.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1[more]
tr|A0A0A0KMQ1|A0A0A0KMQ1_CUCSA2.1e-4659.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1[more]
tr|A0A0A0LRC8|A0A0A0LRC8_CUCSA6.3e-3550.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1[more]
tr|A0A1S3BDW2|A0A1S3BDW2_CUCME7.7e-3350.00probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 P... [more]
BLAST of Bhi07G000047 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49689.19.4e-5971.10hypothetical protein Csa_5G067670 [Cucumis sativus][more]
KGN49690.15.2e-5769.32hypothetical protein Csa_5G068170 [Cucumis sativus][more]
KGN49687.13.1e-4659.54hypothetical protein Csa_5G067410 [Cucumis sativus][more]
XP_023530739.11.2e-4558.38calmodulin-2/4-like [Cucurbita pepo subsp. pepo][more]
XP_022930012.11.6e-4558.96calmodulin-2/4-like [Cucurbita moschata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000047Bhi07M000047mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 26..178
e-value: 4.0E-10
score: 42.0
NoneNo IPR availablePANTHERPTHR44455FAMILY NOT NAMEDcoord: 106..179
NoneNo IPR availablePANTHERPTHR44455:SF5SUBFAMILY NOT NAMEDcoord: 106..179
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 114..141
e-value: 3.0E-5
score: 23.5
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 157..173
e-value: 0.0014
score: 17.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 158..180
score: 7.456
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 109..144
score: 12.449
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 158..170
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 122..134
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 105..173

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi07G000047Cucurbita maxima (Rimu)cmawgoB0913
Bhi07G000047Cucumber (Gy14) v1cgywgoB559
Bhi07G000047Cucumber (Gy14) v2cgybwgoB498
Bhi07G000047Cucurbita maxima (Rimu)cmawgoB0904
Bhi07G000047Cucurbita moschata (Rifu)cmowgoB0906
Bhi07G000047Cucurbita moschata (Rifu)cmowgoB0914
Bhi07G000047Cucurbita pepo (Zucchini)cpewgoB0559
Bhi07G000047Bottle gourd (USVL1VR-Ls)lsiwgoB133
Bhi07G000047Bottle gourd (USVL1VR-Ls)lsiwgoB134
Bhi07G000047Melon (DHL92) v3.6.1medwgoB079
Bhi07G000047Melon (DHL92) v3.6.1medwgoB088
Bhi07G000047Melon (DHL92) v3.5.1mewgoB079
Bhi07G000047Melon (DHL92) v3.5.1mewgoB088
Bhi07G000047Watermelon (Charleston Gray)wcgwgoB172
Bhi07G000047Watermelon (Charleston Gray)wcgwgoB176
Bhi07G000047Watermelon (97103) v2wgowmbB518
Bhi07G000047Watermelon (97103) v2wgowmbB524
Bhi07G000047Watermelon (97103) v1wgowmB565
Bhi07G000047Watermelon (97103) v1wgowmB567