Bhi06G001568 (gene) Wax gourd

Overview
NameBhi06G001568
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 51460205 .. 51460638 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTCTAAGAGCAAGAATAAAGAAATTGATGAAAATCTAGCTGAATCAATTTTCCTTATAACAAAGCAGGTTGGTAAAGCTCTTAGACGAGGGGACAAACATTTAGTATCTCGTGGAAACTATGTGTCCTCCCATGTCAAGGACATTAGTAACATCAGTAGGAACTTTGATCCAAAGCTCTCAAAAGTTCTTCCAAAGAGGATAGAAAGTGACAAAGAAACCAACAGTAATCAAGGCATGAAAGGAAAAAAATTTAGATGTCAAGAGTGTGAGTGTTTCAGACATTTTAAAAATGAATATCAAAACTTTCTGAGAAGACCAAATAAAGAATATTATGCTACCCTATCAGATGACGAAACTAAGTCAAGTAATAACTCTGATGAGGAAGTTCGAGCTCTTATTGGAAGTCTTTCTCTTGAATGTTCTAAT

mRNA sequence

ATGAAAGTTGGTAAAGCTCTTAGACGAGGGGACAAACATTTAGTATCTCGTGGAAACTATGTGTCCTCCCATGTCAAGGACATTAGTAACATCAGTAGGAACTTTGATCCAAAGCTCTCAAAAGTTCTTCCAAAGAGGATAGAAAGTGACAAAGAAACCAACAGTAATCAAGGCATGAAAGGAAAAAAATTTAGATGTCAAGAGTGTGAGTGTTTCAGACATTTTAAAAATGAATATCAAAACTTTCTGAGAAGACCAAATAAAGAATATTATGCTACCCTATCAGATGACGAAACTAAGTCAAGTAATAACTCTGATGAGGAAGTTCGAGCTCTTATTGGAAGTCTTTCTCTTGAATGTTCTAAT

Coding sequence (CDS)

ATGAAAGTTGGTAAAGCTCTTAGACGAGGGGACAAACATTTAGTATCTCGTGGAAACTATGTGTCCTCCCATGTCAAGGACATTAGTAACATCAGTAGGAACTTTGATCCAAAGCTCTCAAAAGTTCTTCCAAAGAGGATAGAAAGTGACAAAGAAACCAACAGTAATCAAGGCATGAAAGGAAAAAAATTTAGATGTCAAGAGTGTGAGTGTTTCAGACATTTTAAAAATGAATATCAAAACTTTCTGAGAAGACCAAATAAAGAATATTATGCTACCCTATCAGATGACGAAACTAAGTCAAGTAATAACTCTGATGAGGAAGTTCGAGCTCTTATTGGAAGTCTTTCTCTTGAATGTTCTAAT

Protein sequence

MKVGKALRRGDKHLVSRGNYVSSHVKDISNISRNFDPKLSKVLPKRIESDKETNSNQGMKGKKFRCQECECFRHFKNEYQNFLRRPNKEYYATLSDDETKSSNNSDEEVRALIGSLSLECSN
Homology
[Close]
BLAST of Bhi06G001568 vs. TrEMBL
Match: tr|A0A0A0L327|A0A0A0L327_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088950 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.5e-04
Identity = 39/115 (33.91%), Postives = 54/115 (46.96%), Query Frame = 0 

Query: 2   KVGKALRRGDKHLVSRGNYVSSHVKDISNISRNFDPKLSKVLPKRIESDKETNSNQGMKG 61
           K G+AL+R DK L  RGNYV  +VK++                          S+ G K 
Sbjct: 46  KFGRALKRWDKRLDPRGNYVDPYVKNV-------------------------GSSGGNK- 105

Query: 62  KKFRCQECECFRHFKNEYQNFLRRPNKEYYATLSDDETKSSNNSDEEVRALIGSL 117
                     F+HF  +  N+LR+  + Y+  LSD+ET S  +SD+EV ALI  L
Sbjct: 106 ----------FKHFHVKCPNYLRKQGQWYFVMLSDEETHSCIDSDDEVHALIDKL 124

[Close]
BLAST of Bhi06G001568 vs. NCBI nr
Match: KGN56173.1 (hypothetical protein Csa_3G088950 [Cucumis sativus])

HSP 1 Score: 52.8 bits (125), Expect = 9.8e-04
Identity = 39/115 (33.91%), Postives = 54/115 (46.96%), Query Frame = 0 

Query: 2   KVGKALRRGDKHLVSRGNYVSSHVKDISNISRNFDPKLSKVLPKRIESDKETNSNQGMKG 61
           K G+AL+R DK L  RGNYV  +VK++                          S+ G K 
Sbjct: 46  KFGRALKRWDKRLDPRGNYVDPYVKNV-------------------------GSSGGNK- 105

Query: 62  KKFRCQECECFRHFKNEYQNFLRRPNKEYYATLSDDETKSSNNSDEEVRALIGSL 117
                     F+HF  +  N+LR+  + Y+  LSD+ET S  +SD+EV ALI  L
Sbjct: 106 ----------FKHFHVKCPNYLRKQGQWYFVMLSDEETHSCIDSDDEVHALIDKL 124

The following BLAST results are available for this feature:
BLAST of Bhi06G001568 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi06G001568 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi06G001568 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L327|A0A0A0L327_CUCSA6.5e-0433.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088950 PE=4 SV=1[more]
BLAST of Bhi06G001568 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56173.19.8e-0433.91hypothetical protein Csa_3G088950 [Cucumis sativus][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001568Bhi06M001568mRNA