Bhi06G001179 (gene) Wax gourd

Overview
NameBhi06G001179
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 40060049 .. 40060671 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTATGCCGCCAAAATTTTTCACCAATAATGCCCACAACCATCCCACTGTCGAGACCACTACTCAAGCACAGTCTATTGCTGAATCGCCTCTGCCGTTCCTCAGACTGTTCCTAACGAGATTAGCACTGAATATCTCTAATGGAATTATAGAGATTAGATGCTTATTACCTTAATCAACGCCACACCTTCTCCATCTGTCTTCTCTCATAGGTTACATCCACAACCACTGCCAGAGAGCTTTGGATCAGTCTTGAGACTCGATATTCTTCTAAAACTCAATCTAGCATATTGGAATAAGATCTGCCCTTTATATAGTCAAGAAAGAGGCCATAGAGAATATCGAACAATATTTGCGAAAAGTAAAAGTATTGGTTGATAACCTTGCCGCTGTCGGTATTCAAATCGATGATGAGGAGACTCTTTTATACCAGTAGAGTTCAATGCCTTTTGCACCTCCATTAGAACGCGGGACACTACTCTTTCCCTTGCAGAGCTTGAAGTCCTTCTGGATGCTAAAGCCATGACCATCAATGCTCTCCAATCGGTGGCTAAATCAGTTCCCACAGCGATGGCCGTATTCCAGCAATCTAATCGTGGCGTTGGACGAGGAGGTGGATGA

mRNA sequence

ATGCCTATGCCGCCAAAATTTTTCACCAATAATGCCCACAACCATCCCACTGTCGAGACCACTACTCAAGCACAGTCTATTGCTGAATCGCCTCTGCCGTTCCTCAGACTGTTACATCCACAACCACTGCCAGAGAGCTTTGGATCACATATTGGAATAAGATCTGCCCTTTATATAGTCAAGAAAGAGGCCATAGAGAATATCGAACAATATTTGCGAAAAGTAAAAGTATTGGTTGATAACCTTGCCGCTGTCGGTATTCAAATCGATGATGAGGAGACTCTTTTATACCAAACGCGGGACACTACTCTTTCCCTTGCAGAGCTTGAAGTCCTTCTGGATGCTAAAGCCATGACCATCAATGCTCTCCAATCGGTGGCTAAATCAGTTCCCACAGCGATGGCCGTATTCCAGCAATCTAATCGTGGCGTTGGACGAGGAGGTGGATGA

Coding sequence (CDS)

ATGCCTATGCCGCCAAAATTTTTCACCAATAATGCCCACAACCATCCCACTGTCGAGACCACTACTCAAGCACAGTCTATTGCTGAATCGCCTCTGCCGTTCCTCAGACTGTTACATCCACAACCACTGCCAGAGAGCTTTGGATCACATATTGGAATAAGATCTGCCCTTTATATAGTCAAGAAAGAGGCCATAGAGAATATCGAACAATATTTGCGAAAAGTAAAAGTATTGGTTGATAACCTTGCCGCTGTCGGTATTCAAATCGATGATGAGGAGACTCTTTTATACCAAACGCGGGACACTACTCTTTCCCTTGCAGAGCTTGAAGTCCTTCTGGATGCTAAAGCCATGACCATCAATGCTCTCCAATCGGTGGCTAAATCAGTTCCCACAGCGATGGCCGTATTCCAGCAATCTAATCGTGGCGTTGGACGAGGAGGTGGATGA

Protein sequence

MPMPPKFFTNNAHNHPTVETTTQAQSIAESPLPFLRLLHPQPLPESFGSHIGIRSALYIVKKEAIENIEQYLRKVKVLVDNLAAVGIQIDDEETLLYQTRDTTLSLAELEVLLDAKAMTINALQSVAKSVPTAMAVFQQSNRGVGRGGG
Homology
[Close]
BLAST of Bhi06G001179 vs. TrEMBL
Match: tr|A0A1S4E4S1|A0A1S4E4S1_CUCME (uncharacterized protein LOC107991968 OS=Cucumis melo OX=3656 GN=LOC107991968 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-04
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 51  IGIRSALYIVKKEAIENIEQYLRKVKVLVDNLAAVGIQIDDEETLLY------------- 110
           + + SALY +KK   E+I+QY  ++K  VD LAA  I +++E  L++             
Sbjct: 135 LDLTSALYTLKKTPSESIDQYTSRIKAFVDKLAAASISLENEGILVHTLNGLPAAFHAFR 194

Query: 111 ---QTRDTTLSLAELEVLLDAKAMTINALQSVAKSVPTAMAVF 138
              +TR   +SL EL  LL ++  T+    ++ +++PTAMA F
Sbjct: 195 TSIRTRSGNISLEELHTLLISEETTMTKASAI-EAIPTAMAAF 236

[Close]
BLAST of Bhi06G001179 vs. NCBI nr
Match: XP_016902970.1 (PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo])

HSP 1 Score: 53.1 bits (126), Expect = 9.2e-04
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 51  IGIRSALYIVKKEAIENIEQYLRKVKVLVDNLAAVGIQIDDEETLLY------------- 110
           + + SALY +KK   E+I+QY  ++K  VD LAA  I +++E  L++             
Sbjct: 135 LDLTSALYTLKKTPSESIDQYTSRIKAFVDKLAAASISLENEGILVHTLNGLPAAFHAFR 194

Query: 111 ---QTRDTTLSLAELEVLLDAKAMTINALQSVAKSVPTAMAVF 138
              +TR   +SL EL  LL ++  T+    ++ +++PTAMA F
Sbjct: 195 TSIRTRSGNISLEELHTLLISEETTMTKASAI-EAIPTAMAAF 236

The following BLAST results are available for this feature:
BLAST of Bhi06G001179 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi06G001179 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi06G001179 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E4S1|A0A1S4E4S1_CUCME6.1e-0433.01uncharacterized protein LOC107991968 OS=Cucumis melo OX=3656 GN=LOC107991968 PE=... [more]
BLAST of Bhi06G001179 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902970.19.2e-0433.01PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001179Bhi06M001179mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi06G001179Cucurbita maxima (Rimu)cmawgoB0925
Bhi06G001179Cucurbita moschata (Rifu)cmowgoB0041
Bhi06G001179Cucurbita moschata (Rifu)cmowgoB0092
Bhi06G001179Cucurbita moschata (Rifu)cmowgoB0184
Bhi06G001179Cucurbita moschata (Rifu)cmowgoB0927
Bhi06G001179Cucurbita pepo (Zucchini)cpewgoB0126
Bhi06G001179Cucurbita pepo (Zucchini)cpewgoB0435
Bhi06G001179Cucurbita pepo (Zucchini)cpewgoB0833
Bhi06G001179Cucurbita pepo (Zucchini)cpewgoB1021
Bhi06G001179Wild cucumber (PI 183967)cpiwgoB006
Bhi06G001179Wild cucumber (PI 183967)cpiwgoB138
Bhi06G001179Cucumber (Chinese Long) v3cucwgoB006
Bhi06G001179Cucumber (Chinese Long) v3cucwgoB145
Bhi06G001179Cucumber (Chinese Long) v2cuwgoB008
Bhi06G001179Cucumber (Chinese Long) v2cuwgoB136
Bhi06G001179Bottle gourd (USVL1VR-Ls)lsiwgoB109
Bhi06G001179Melon (DHL92) v3.6.1medwgoB267
Bhi06G001179Melon (DHL92) v3.6.1medwgoB456
Bhi06G001179Melon (DHL92) v3.5.1mewgoB266
Bhi06G001179Melon (DHL92) v3.5.1mewgoB453
Bhi06G001179Watermelon (Charleston Gray)wcgwgoB142
Bhi06G001179Watermelon (97103) v1wgowmB156
Bhi06G001179Watermelon (Charleston Gray)wcgwgoB511
Bhi06G001179Watermelon (97103) v2wgowmbB115
Bhi06G001179Watermelon (97103) v2wgowmbB141
Bhi06G001179Watermelon (97103) v1wgowmB138
Bhi06G001179Silver-seed gourdcarwgoB0066
Bhi06G001179Silver-seed gourdcarwgoB0586
Bhi06G001179Silver-seed gourdcarwgoB0616
Bhi06G001179Wax gourdwgowgoB047
Bhi06G001179Cucumber (Gy14) v1cgywgoB114
Bhi06G001179Cucumber (Gy14) v2cgybwgoB006
Bhi06G001179Cucumber (Gy14) v2cgybwgoB132
Bhi06G001179Cucurbita maxima (Rimu)cmawgoB0047
Bhi06G001179Cucurbita maxima (Rimu)cmawgoB0098
Bhi06G001179Cucurbita maxima (Rimu)cmawgoB0187