Bhi06G001162 (gene) Wax gourd

Overview
NameBhi06G001162
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr6 : 39238772 .. 39239509 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTTTTCACAATATCACTGATCAAAATGAAGTAGTAGATAATTTTCCAGATTTGGTATTACCAAGGATATTGTCTACTTTCTTACCTAATGTTGTTTCTACTGATACTAATGTGAATAAACATTCTCTTCATGATCTTGCAGCCACATCACCTACTGTTCATCATGATAGCCCTATTGTGAACAATAATGATGATATGCTTACAGATTCTTCAAATAATGATGTCATTGTTGCTGATACTAGACCATTTTCTTATGATATTAATGATAAATCAGATGATTGCTGTCTTGGTGGTTCTTCCAGCGGTGTTCCTAATATTGATAGCATCATTCCTCGTCATTCTACTAGAATAATAAAGCTTCCTTCTTATTTAAGGGAATATCATTGTAGTCTTTTACATGCCACCTCTATGGAACCAACTGGATCTCGATATCCTTTGACTTCTGTTATATCATATGAAAAACTTTCTCCTACTTGTCGACATTTTGTTTTAAGTGTTTCTTCTGAATATGAACCACAGTTTTATCATCAAGCTATCTTTTTTCCTCATTGGCATTTTGCCATGGCTAATGAATTAAAAGCATTGGAAGCCAACAACACTTGGTTTGTCATTCCTCTTCCTCTAGGGCAACATTCTATTGGATGCAAGTGGGTGTATAAAATCAAGCATAAATCGGATGGATCTGTTGAACGTTATAAAGCTCGCCTCGTTACAAAACGATATACTCAATAA

mRNA sequence

ATGTTTCCTTTTCACAATATCACTGATCAAAATGAAGTAGTAGATAATTTTCCAGATTTGGTATTACCAAGGATATTGTCTACTTTCTTACCTAATGTTGTTTCTACTGATACTAATGTGAATAAACATTCTCTTCATGATCTTGCAGCCACATCACCTACTGTTCATCATGATAGCCCTATTGTGAACAATAATGATGATATGCTTACAGATTCTTCAAATAATGATGTCATTGTTGCTGATACTAGACCATTTTCTTATGATATTAATGATAAATCAGATGATTGCTGTCTTGGTGGTTCTTCCAGCGGTGTTCCTAATATTGATAGCATCATTCCTCGTCATTCTACTAGAATAATAAAGCTTCCTTCTTATTTAAGGGAATATCATTGTAGTCTTTTACATGCCACCTCTATGGAACCAACTGGATCTCGATATCCTTTGACTTCTGTTATATCATATGAAAAACTTTCTCCTACTTGTCGACATTTTGTTTTAAGTGTTTCTTCTGAATATGAACCACAGTTTTATCATCAAGCTATCTTTTTTCCTCATTGGCATTTTGCCATGGCTAATGAATTAAAAGCATTGGAAGCCAACAACACTTGGTTTGTCATTCCTCTTCCTCTAGGGCAACATTCTATTGGATGCAAGTGGGTGTATAAAATCAAGCATAAATCGGATGGATCTGTTGAACGTTATAAAGCTCGCCTCGTTACAAAACGATATACTCAATAA

Coding sequence (CDS)

ATGTTTCCTTTTCACAATATCACTGATCAAAATGAAGTAGTAGATAATTTTCCAGATTTGGTATTACCAAGGATATTGTCTACTTTCTTACCTAATGTTGTTTCTACTGATACTAATGTGAATAAACATTCTCTTCATGATCTTGCAGCCACATCACCTACTGTTCATCATGATAGCCCTATTGTGAACAATAATGATGATATGCTTACAGATTCTTCAAATAATGATGTCATTGTTGCTGATACTAGACCATTTTCTTATGATATTAATGATAAATCAGATGATTGCTGTCTTGGTGGTTCTTCCAGCGGTGTTCCTAATATTGATAGCATCATTCCTCGTCATTCTACTAGAATAATAAAGCTTCCTTCTTATTTAAGGGAATATCATTGTAGTCTTTTACATGCCACCTCTATGGAACCAACTGGATCTCGATATCCTTTGACTTCTGTTATATCATATGAAAAACTTTCTCCTACTTGTCGACATTTTGTTTTAAGTGTTTCTTCTGAATATGAACCACAGTTTTATCATCAAGCTATCTTTTTTCCTCATTGGCATTTTGCCATGGCTAATGAATTAAAAGCATTGGAAGCCAACAACACTTGGTTTGTCATTCCTCTTCCTCTAGGGCAACATTCTATTGGATGCAAGTGGGTGTATAAAATCAAGCATAAATCGGATGGATCTGTTGAACGTTATAAAGCTCGCCTCGTTACAAAACGATATACTCAATAA

Protein sequence

MFPFHNITDQNEVVDNFPDLVLPRILSTFLPNVVSTDTNVNKHSLHDLAATSPTVHHDSPIVNNNDDMLTDSSNNDVIVADTRPFSYDINDKSDDCCLGGSSSGVPNIDSIIPRHSTRIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYTQ
Homology
[Close]
BLAST of Bhi06G001162 vs. Swiss-Prot
Match: sp|P92520|M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 

Query: 156 KLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSI 215
           KL+P      ++ + + EP+    A+  P W  AM  EL AL  N TW ++P P+ Q+ +
Sbjct: 11  KLNPK-YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNIL 70

Query: 216 GCKWVYKIKHKSDGSVERYKARLVTKRYTQ 246
           GCKWV+K K  SDG+++R KARLV K + Q
Sbjct: 71  GCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

[Close]
BLAST of Bhi06G001162 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 166  LSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSI-GCKWVYKIK 225
            +S+++E EP+   QA+    W  AM +E+ A   N+TW ++P P    +I GC+W++  K
Sbjct: 948  VSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1007

Query: 226  HKSDGSVERYKARLVTKRYTQ 246
            + SDGS+ RYKARLV K Y Q
Sbjct: 1008 YNSDGSLNRYKARLVAKGYNQ 1028

[Close]
BLAST of Bhi06G001162 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 164  FVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSI-GCKWVYK 223
            +  S+++  EP+   QA+    W  AM +E+ A   N+TW ++P P    +I GC+W++ 
Sbjct: 929  YATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFT 988

Query: 224  IKHKSDGSVERYKARLVTKRYTQ 246
             K  SDGS+ RYKARLV K Y Q
Sbjct: 989  KKFNSDGSLNRYKARLVAKGYNQ 1011

[Close]
BLAST of Bhi06G001162 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0 

Query: 168 VSSEYEPQFYHQAIFFPHWH---FAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIK 227
           +S + EP+   + +  P  +    AM  E+++L+ N T+ ++ LP G+  + CKWV+K+K
Sbjct: 805 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK 864

Query: 228 HKSDGSVERYKARLVTKRYTQ 246
              D  + RYKARLV K + Q
Sbjct: 865 KDGDCKLVRYKARLVVKGFEQ 885

[Close]
BLAST of Bhi06G001162 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0 

Query: 186 WHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYTQ 245
           W  A+  EL A + NNTW +   P  ++ +  +WV+ +K+   G+  RYKARLV + +TQ
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

[Close]
BLAST of Bhi06G001162 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 112.1 bits (279), Expect = 5.0e-25
Identity = 57/143 (39.86%), Postives = 88/143 (61.54%), Query Frame = 0 

Query: 107 NIDSIIPRHST----RIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCR 166
           NI + +P  S     R  + P+YL++Y+C  + + ++      + ++  +SYEK+SP   
Sbjct: 21  NIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTI------HDISQFLSYEKVSPLYH 80

Query: 167 HFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYK 226
            F++ ++   EP  Y++A  F  W  AM +E+ A+E  +TW +  LP  +  IGCKWVYK
Sbjct: 81  SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 140

Query: 227 IKHKSDGSVERYKARLVTKRYTQ 246
           IK+ SDG++ERYKARLV K YTQ
Sbjct: 141 IKYNSDGTIERYKARLVAKGYTQ 157

[Close]
BLAST of Bhi06G001162 vs. TAIR10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 

Query: 156 KLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSI 215
           KL+P      ++ + + EP+    A+  P W  AM  EL AL  N TW ++P P+ Q+ +
Sbjct: 11  KLNPK-YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNIL 70

Query: 216 GCKWVYKIKHKSDGSVERYKARLVTKRYTQ 246
           GCKWV+K K  SDG+++R KARLV K + Q
Sbjct: 71  GCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

[Close]
BLAST of Bhi06G001162 vs. TrEMBL
Match: tr|A0A2N9H2Y3|A0A2N9H2Y3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34107 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 9.6e-39
Identity = 90/165 (54.55%), Postives = 111/165 (67.27%), Query Frame = 0 

Query: 98   LGGSSSGVPNIDSIIP-----------RHSTRIIKLPSYLREYHCSLLH---ATSMEP-- 157
            L  +SS  P++D I             R STR+ K P+YL++YHC L H   +TS  P  
Sbjct: 1755 LDHNSSSSPSLDHIETDSPGQSVSSPLRRSTRVHKPPTYLQDYHCQLAHCVGSTSSPPLA 1814

Query: 158  -TGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEAN 217
             +G  YPL++ +SY+ LSPT R+F LSV++  EP F+HQA   PHW  AM  EL ALEAN
Sbjct: 1815 SSGKPYPLSTSLSYDHLSPTHRNFALSVTAILEPSFFHQANQSPHWQEAMFAELAALEAN 1874

Query: 218  NTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYTQ 246
            NTW + PLPLG+H IGCKWVYK+K KSDGS+ERYKARLV K YTQ
Sbjct: 1875 NTWTLTPLPLGKHPIGCKWVYKVKLKSDGSLERYKARLVAKGYTQ 1919

[Close]
BLAST of Bhi06G001162 vs. TrEMBL
Match: tr|A0A2N9J064|A0A2N9J064_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57772 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 92/179 (51.40%), Postives = 113/179 (63.13%), Query Frame = 0 

Query: 84  PFSYDINDKSDDCCLGGSSSGVPNIDSIIP-----------RHSTRIIKLPSYLREYHCS 143
           P S   +       L  +SS  P++D I P           R STR+ K P+YL++YHC 
Sbjct: 818 PVSASFSPLDTSSLLDHNSSSSPSLDHIEPDSPGQSVPSPLRRSTRVHKPPTYLQDYHCQ 877

Query: 144 LLH---ATSMEP---TGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQFYHQAIFFPHW 203
           L H   +TS  P   +G  YPL++ +SY  LSPT R+F LSV++  EP  +HQA   PHW
Sbjct: 878 LAHCVGSTSSPPLASSGKPYPLSTSLSYAHLSPTHRNFALSVTAISEPSSFHQANQSPHW 937

Query: 204 HFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYTQ 246
             AM  EL ALEANNTW + PLPLG+H IGCKWVYK+K KSDGS+ERYKARLV K YTQ
Sbjct: 938 QEAMFAELAALEANNTWTLTPLPLGKHPIGCKWVYKVKLKSDGSLERYKARLVAKGYTQ 996

[Close]
BLAST of Bhi06G001162 vs. TrEMBL
Match: tr|A0A2N9EHN7|A0A2N9EHN7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2137 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.9e-37
Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 0 

Query: 114  RHSTRIIKLPSYLREYHCSLLH---ATSMEP---TGSRYPLTSVISYEKLSPTCRHFVLS 173
            R STR+ K P+YL++YHC L H   +TS  P   +G+ YPL++ +SY+ LSPT R+F LS
Sbjct: 976  RRSTRVHKPPTYLQDYHCQLAHCVGSTSSPPIASSGTPYPLSTSLSYDHLSPTHRNFALS 1035

Query: 174  VSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKS 233
            V++  EP  +HQA   PHW  AM  EL ALEANNTW + PLP G+H IGCKWVYK+K KS
Sbjct: 1036 VTAISEPSSFHQANQNPHWQEAMFAELAALEANNTWTLTPLPPGKHPIGCKWVYKVKLKS 1095

Query: 234  DGSVERYKARLVTKRYTQ 246
            DGS+ERYKARLV K YTQ
Sbjct: 1096 DGSLERYKARLVAKGYTQ 1113

[Close]
BLAST of Bhi06G001162 vs. TrEMBL
Match: tr|A0A2N9G1Y1|A0A2N9G1Y1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21454 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.4e-36
Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 0 

Query: 114  RHSTRIIKLPSYLREYHCSLLH---ATSMEPT---GSRYPLTSVISYEKLSPTCRHFVLS 173
            R STR+ K  +YL++YHC L H   +TS  PT   G+ YPL++ +SY+ LSPT R+F LS
Sbjct: 976  RRSTRVHKPLTYLQDYHCQLAHCVGSTSSPPTASSGTPYPLSTSLSYDHLSPTHRNFALS 1035

Query: 174  VSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKS 233
            V++  EP  +HQA   PHW  AM  EL ALEANNTW + PLP G+H IGCKWVYK+K KS
Sbjct: 1036 VTAISEPSSFHQANQNPHWQEAMFAELAALEANNTWTLTPLPPGKHPIGCKWVYKVKLKS 1095

Query: 234  DGSVERYKARLVTKRYTQ 246
            DGS+ERYKARLV K YTQ
Sbjct: 1096 DGSLERYKARLVAKGYTQ 1113

[Close]
BLAST of Bhi06G001162 vs. TrEMBL
Match: tr|A0A2N9GFG7|A0A2N9GFG7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25853 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.8e-36
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 0 

Query: 93  SDDCCLGGSSSGVP--------NIDSIIP-RHSTRIIKLPSYLREYHCSLLHATSMEPTG 152
           SD      S SG P        + D I+P R STR   +PSYL++YHC+L  +     + 
Sbjct: 613 SDPSSASTSDSGSPLSVSPPDIHSDPILPTRKSTRPRHVPSYLQDYHCNLASSLPSHTSN 672

Query: 153 SRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANNTW 212
           + YP+ S +SY  LSP  + + L++S+  EP+FYH+AI  PHW  AM  EL ALEAN+TW
Sbjct: 673 ASYPIESTLSYSHLSPPHKAYTLAISTPVEPKFYHEAISSPHWCEAMTKELAALEANHTW 732

Query: 213 FVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYTQ 246
            +  LP G+H IGCKWVYKIK KSDGS+ERYKARLV K Y Q
Sbjct: 733 VLTSLPPGKHPIGCKWVYKIKFKSDGSIERYKARLVAKGYNQ 774

[Close]
BLAST of Bhi06G001162 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 3.3e-43
Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0 

Query: 1   MFPFHNITDQNEVVDNFPDLVLPRILSTFLPNVVSTDTNVNKHSLHDLAATSPTVHHXXX 60
           +FPFH ++  + +VD FP +V+P+       +  + D + N  +   ++ TS  +     
Sbjct: 541 IFPFHTVSVNSPIVDPFPGVVIPKSYDLVDTSSGAPDDHHNYATGSAVSPTSADISPTVV 600

Query: 61  XXXXXXXXXXXXXXXXXXXADTRPFSYDINDKSDDCCLGGSSSGVPNIDS--IIP----- 120
                          XXXX         + +  ++  +    + V N+DS  ++P     
Sbjct: 601 IPDGSPIMVANESDAXXXXXXXXXXXXIMPNIVENSLINPLDTDVANVDSAVVVPCSDPS 660

Query: 121 -----RHSTRIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCRHFVLSV 180
                R S+R+ + PSYLR+YHC L+ AT    +   YPL   + Y  LS + + FVLSV
Sbjct: 661 DSVTLRRSSRVAQRPSYLRDYHCGLIQATDHSASSVFYPLQKYLDYNNLSASYKEFVLSV 720

Query: 181 SSEYEPQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSD 240
           S +YEPQFYHQA+ F HW  AM  EL A+EAN+TW V+PLP   HSIGCKW+YK+KHKSD
Sbjct: 721 SCDYEPQFYHQAVPFSHWREAMRAELHAMEANHTWSVVPLPYEHHSIGCKWIYKVKHKSD 780

Query: 241 GSVERYKARLVTKRYTQ 246
           GS+ERYKARLV K YTQ
Sbjct: 781 GSIERYKARLVAKGYTQ 797

[Close]
BLAST of Bhi06G001162 vs. NCBI nr
Match: XP_022147774.1 (uncharacterized protein LOC111016631 isoform X1 [Momordica charantia] >XP_022147776.1 uncharacterized protein LOC111016631 isoform X1 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36
Identity = 74/130 (56.92%), Postives = 96/130 (73.85%), Query Frame = 0 

Query: 116 STRIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQ 175
           S+R ++ PSYLR+YHCSL H+  +  +  +Y L   +SY+KLSP  + F+L+VS+ +EP 
Sbjct: 138 SSRDVRRPSYLRDYHCSLAHSNVLASSPLKYKLQEYLSYDKLSPGYKRFILNVSTHHEPS 197

Query: 176 FYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYK 235
           FYH A+ + HW  AM  EL A+E+NNTW V+ LP G HSIGCKWVYK+KH  DGS+ERYK
Sbjct: 198 FYHHAVSYFHWRDAMNAELLAMESNNTWSVV-LPPGHHSIGCKWVYKVKHNPDGSIERYK 257

Query: 236 ARLVTKRYTQ 246
           ARLV K YTQ
Sbjct: 258 ARLVAKGYTQ 266

[Close]
BLAST of Bhi06G001162 vs. NCBI nr
Match: XP_022152756.1 (uncharacterized protein LOC111020399 [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36
Identity = 79/163 (48.47%), Postives = 108/163 (66.26%), Query Frame = 0 

Query: 82  TRPFSYDINDKSDDCCLGGSSSGVPNIDSIIPRHSTRIIKLPSYLREYHCSLLHATSMEP 141
           T  F +D++  + D  +   +S       + PR S+R  + PSYL++YHC L+ +     
Sbjct: 505 TSDFVHDVSSDNVDTLISVRAS------VVAPRRSSRPTRKPSYLQDYHCGLIKSNVSPV 564

Query: 142 TGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQFYHQAIFFPHWHFAMANELKALEANN 201
           +  +Y L   + Y+ L    R FVL+VS+ YEPQFYHQA+ F HW  AM +EL+A+E+N 
Sbjct: 565 SSVQYLLHKHLVYDWLCSNYRGFVLNVSATYEPQFYHQAVSFSHWRDAMRDELQAMESNY 624

Query: 202 TWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYKARLVTKRYT 245
           TW V+PL  GQHSIGCKWVYKIK+KSDG+++RYKARLV K YT
Sbjct: 625 TWSVVPLTSGQHSIGCKWVYKIKYKSDGTIDRYKARLVAKGYT 661

[Close]
BLAST of Bhi06G001162 vs. NCBI nr
Match: KYP68601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 152.1 bits (383), Expect = 2.4e-33
Identity = 71/132 (53.79%), Postives = 95/132 (71.97%), Query Frame = 0 

Query: 114 RHSTRIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCRHFVLSVSSEYE 173
           R S RI   P+YL+++HC+ L ++     G  +P++SVI+Y  LS +  H+VLS+S+  E
Sbjct: 403 RRSQRIPFPPTYLKDFHCNFLTSSPQLSKGISHPISSVINYNTLSSSHLHYVLSLSTHEE 462

Query: 174 PQFYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVER 233
           P+FYHQA+    W  AM  E+ AL ANNTW ++ LP G+H IGCKWVYKIK++SDGSVER
Sbjct: 463 PKFYHQAVKLQEWVVAMKAEIDALTANNTWTIVDLPSGKHPIGCKWVYKIKYRSDGSVER 522

Query: 234 YKARLVTKRYTQ 246
           YKARLV K +TQ
Sbjct: 523 YKARLVAKGFTQ 534

[Close]
BLAST of Bhi06G001162 vs. NCBI nr
Match: XP_022147777.1 (uncharacterized protein LOC111016631 isoform X2 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 0 

Query: 116 STRIIKLPSYLREYHCSLLHATSMEPTGSRYPLTSVISYEKLSPTCRHFVLSVSSEYEPQ 175
           S+R ++ PSYLR+YHCSL H+  +  +  +Y L   +SY+KLSP  + F+L+VS+ +EP 
Sbjct: 138 SSRDVRRPSYLRDYHCSLAHSNVLASSPLKYKLQEYLSYDKLSPGYKRFILNVSTHHEPS 197

Query: 176 FYHQAIFFPHWHFAMANELKALEANNTWFVIPLPLGQHSIGCKWVYKIKHKSDGSVERYK 235
           FYH A+ + HW  AM  EL A+E+NNTW V+ LP G HSIGCKWVYK+KH  DGS+ERYK
Sbjct: 198 FYHHAVSYFHWRDAMNAELLAMESNNTWSVV-LPPGHHSIGCKWVYKVKHNPDGSIERYK 257

Query: 236 AR 238
           AR
Sbjct: 258 AR 258

The following BLAST results are available for this feature:
BLAST of Bhi06G001162 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P92520|M820_ARATH2.1e-1242.22Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q94HW2|POLR1_ARATH1.3e-1143.21Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
sp|Q9ZT94|POLR2_ARATH1.9e-1040.96Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
sp|P10978|POLX_TOBAC4.0e-0835.80Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
sp|P04146|COPIA_DROME2.2e-0638.33Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
BLAST of Bhi06G001162 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.15.0e-2539.86cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.11.1e-1342.22Reverse transcriptase (RNA-dependent DNA polymerase)[more]
BLAST of Bhi06G001162 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9H2Y3|A0A2N9H2Y3_FAGSY9.6e-3954.55Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34107 PE=4 SV=1[more]
tr|A0A2N9J064|A0A2N9J064_FAGSY1.6e-3851.40Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57772 PE=4 SV=1[more]
tr|A0A2N9EHN7|A0A2N9EHN7_FAGSY8.9e-3759.42Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2137 PE=4 SV=1[more]
tr|A0A2N9G1Y1|A0A2N9G1Y1_FAGSY4.4e-3659.42Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21454 PE=4 SV=1[more]
tr|A0A2N9GFG7|A0A2N9GFG7_FAGSY5.8e-3650.62Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25853 PE=4 SV=1[more]
BLAST of Bhi06G001162 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154919.13.3e-4340.08uncharacterized protein LOC111022065 [Momordica charantia][more]
XP_022147774.11.8e-3656.92uncharacterized protein LOC111016631 isoform X1 [Momordica charantia] >XP_022147... [more]
XP_022152756.12.3e-3648.47uncharacterized protein LOC111020399 [Momordica charantia][more]
KYP68601.12.4e-3353.79Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
XP_022147777.13.1e-3355.74uncharacterized protein LOC111016631 isoform X2 [Momordica charantia][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001162Bhi06M001162mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 200..245
e-value: 2.0E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR11439:SF204SUBFAMILY NOT NAMEDcoord: 148..245
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 148..245

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi06G001162Wax gourdwgowgoB047
Bhi06G001162Wax gourdwgowgoB052
Bhi06G001162Cucumber (Gy14) v1cgywgoB114
Bhi06G001162Cucumber (Gy14) v1cgywgoB122
Bhi06G001162Cucumber (Gy14) v2cgybwgoB132
Bhi06G001162Cucurbita maxima (Rimu)cmawgoB0047
Bhi06G001162Cucurbita maxima (Rimu)cmawgoB0053
Bhi06G001162Cucurbita maxima (Rimu)cmawgoB0098
Bhi06G001162Cucurbita maxima (Rimu)cmawgoB0187
Bhi06G001162Cucurbita maxima (Rimu)cmawgoB0925
Bhi06G001162Cucurbita moschata (Rifu)cmowgoB0041
Bhi06G001162Cucurbita moschata (Rifu)cmowgoB0047
Bhi06G001162Cucurbita moschata (Rifu)cmowgoB0092
Bhi06G001162Cucurbita moschata (Rifu)cmowgoB0184
Bhi06G001162Cucurbita moschata (Rifu)cmowgoB0927
Bhi06G001162Cucurbita pepo (Zucchini)cpewgoB0126
Bhi06G001162Cucurbita pepo (Zucchini)cpewgoB0434
Bhi06G001162Cucurbita pepo (Zucchini)cpewgoB0435
Bhi06G001162Cucurbita pepo (Zucchini)cpewgoB1021
Bhi06G001162Wild cucumber (PI 183967)cpiwgoB004
Bhi06G001162Wild cucumber (PI 183967)cpiwgoB138
Bhi06G001162Cucumber (Chinese Long) v3cucwgoB004
Bhi06G001162Cucumber (Chinese Long) v3cucwgoB145
Bhi06G001162Cucumber (Chinese Long) v2cuwgoB003
Bhi06G001162Cucumber (Chinese Long) v2cuwgoB136
Bhi06G001162Bottle gourd (USVL1VR-Ls)lsiwgoB109
Bhi06G001162Bottle gourd (USVL1VR-Ls)lsiwgoB475
Bhi06G001162Melon (DHL92) v3.6.1medwgoB269
Bhi06G001162Melon (DHL92) v3.6.1medwgoB456
Bhi06G001162Melon (DHL92) v3.5.1mewgoB268
Bhi06G001162Melon (DHL92) v3.5.1mewgoB453
Bhi06G001162Watermelon (Charleston Gray)wcgwgoB142
Bhi06G001162Watermelon (97103) v1wgowmB156
Bhi06G001162Watermelon (Charleston Gray)wcgwgoB509
Bhi06G001162Watermelon (Charleston Gray)wcgwgoB511
Bhi06G001162Watermelon (97103) v2wgowmbB115
Bhi06G001162Watermelon (97103) v2wgowmbB138
Bhi06G001162Watermelon (97103) v2wgowmbB141
Bhi06G001162Watermelon (97103) v1wgowmB138
Bhi06G001162Watermelon (97103) v1wgowmB153
Bhi06G001162Silver-seed gourdcarwgoB0066
Bhi06G001162Silver-seed gourdcarwgoB0920