Bhi06G001023 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G001023
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	U-box domain-containing protein 35-like
Location	chr6 : 33323711 .. 33323914 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGAGGAGCTCAAAAGAAGGATGTGGCGGTGGCGATCGACAAAGACAAATGCAGTCAAAACGCTTTGAAATGGACAATCGAACGCCTTCTGAGCAAAGGCCAAATGGTTACTCTGCTTCATGTTAAACAGAAACCGTCTTCTTCAGCGCAACCGAGTAAGAACAAACAAAAATTGGGGGAAATTTTGGAACTCTAA

mRNA sequence

ATGGCGAAAGGAGGAGCTCAAAAGAAGGATGTGGCGGTGGCGATCGACAAAGACAAATGCAGTCAAAACGCTTTGAAATGGACAATCGAACGCCTTCTGAGCAAAGGCCAAATGGTTACTCTGCTTCATGTTAAACAGAAACCGTCTTCTTCAGCGCAACCGAGTAAGAACAAACAAAAATTGGGGGAAATTTTGGAACTCTAA

Coding sequence (CDS)

ATGGCGAAAGGAGGAGCTCAAAAGAAGGATGTGGCGGTGGCGATCGACAAAGACAAATGCAGTCAAAACGCTTTGAAATGGACAATCGAACGCCTTCTGAGCAAAGGCCAAATGGTTACTCTGCTTCATGTTAAACAGAAACCGTCTTCTTCAGCGCAACCGAGTAAGAACAAACAAAAATTGGGGGAAATTTTGGAACTCTAA

Protein sequence

MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKNKQKLGEILEL

Homology

[Close]

BLAST of Bhi06G001023 vs. TAIR10
Match: AT1G16760.1 (Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 56.6 bits (135), Expect = 6.8e-09
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 3  KGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSS 52
          K G +   VA+AIDKDK SQNA+KWT+E L ++GQ + L+HV  K  SS
Sbjct: 10 KKGTRNGSVAIAIDKDKSSQNAIKWTLENLATRGQTLALIHVLPKSQSS 58

[Close]

BLAST of Bhi06G001023 vs. TAIR10
Match: AT5G35380.1 (Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 56.6 bits (135), Expect = 6.8e-09
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 7  QKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQK-PSSSAQPSKNKQKLGE 64
          +++++ +AID+DK SQNALKW +  LLS+GQ +TLLHVK K PSS      N  K G+
Sbjct: 8  REENITLAIDRDKESQNALKWAVSNLLSRGQTLTLLHVKLKQPSSLPYSGSNFSKPGD 65

[Close]

BLAST of Bhi06G001023 vs. TAIR10
Match: AT4G31230.1 (Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-08
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 11 VAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSS-SAQPSKN 58
          VAVAID+DK SQ ALKW ++ LL KGQ V L+HVK + SS S  PS N
Sbjct: 18 VAVAIDRDKNSQGALKWAVDNLLQKGQTVVLVHVKPRASSLSTNPSIN 65

[Close]

BLAST of Bhi06G001023 vs. TAIR10
Match: AT2G24370.1 (Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-08
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 3  KGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPS---SSAQPSKNKQ 62
          K G     VAVAIDKDK SQ+ALKW ++ LL +GQ V L+HVK +PS   +SA    +  
Sbjct: 12 KEGGSSGVVAVAIDKDKSSQHALKWAVDNLLQRGQSVILVHVKLRPSPLNNSASLHASSA 71

Query: 63 KLGE 64
          KL +
Sbjct: 72 KLSQ 75

[Close]

BLAST of Bhi06G001023 vs. TAIR10
Match: AT1G78940.2 (Protein kinase protein with adenine nucleotide alpha hydrolases-like domain)

HSP 1 Score: 53.5 bits (127), Expect = 5.7e-08
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 5  GAQKK----DVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSA 53
          GA+K+     VAVAIDKDK SQ+ALKWTI+ L S+GQ ++L+HV  +  SS+
Sbjct: 8  GAKKETGSGSVAVAIDKDKGSQHALKWTIDNLASRGQTISLIHVLCRSHSSS 59

[Close]

BLAST of Bhi06G001023 vs. TrEMBL
Match: tr|A0A0A0LHF7|A0A0A0LHF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070300 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.3e-17
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPS 56
          MAKGGAQKKDVAVAIDKDKCSQ ALKW IERLLS+GQ+VTLLHVKQKPSSSA  S
Sbjct: 1  MAKGGAQKKDVAVAIDKDKCSQYALKWAIERLLSRGQVVTLLHVKQKPSSSAAHS 55

[Close]

BLAST of Bhi06G001023 vs. TrEMBL
Match: tr|A5C5X6|A5C5X6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012742 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-09
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5  GAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKNKQKLGEI 64
          G +K +VAVAIDKDK SQ ALKW ++ LLSKGQ VTLLH+KQK SS   P  N+  + ++
Sbjct: 7  GEKKVEVAVAIDKDKGSQYALKWAVDHLLSKGQSVTLLHIKQKASSIPNPLGNQVAISDV 66

Query: 65 LE 67
           E
Sbjct: 67 NE 68

[Close]

BLAST of Bhi06G001023 vs. TrEMBL
Match: tr|F6H9Q1|F6H9Q1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0065g00390 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-09
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5  GAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKNKQKLGEI 64
          G +K +VAVAIDKDK SQ ALKW ++ LLSKGQ VTLLH+KQK SS   P  N+  + ++
Sbjct: 7  GEKKVEVAVAIDKDKGSQYALKWAVDHLLSKGQSVTLLHIKQKASSIPNPLGNQVAISDV 66

Query: 65 LE 67
           E
Sbjct: 67 NE 68

[Close]

BLAST of Bhi06G001023 vs. TrEMBL
Match: tr|A0A2P5WNJ9|A0A2P5WNJ9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA28018 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.7e-09
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 1  MAKGGAQKKD--VAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKNK 60
          MAK   +K++  VAVAIDKDK SQ+ALKW ++ L+S+GQ +TLLHVK KPSS   PS + 
Sbjct: 1  MAKRNGEKRNESVAVAIDKDKGSQHALKWAVDHLISRGQSITLLHVKTKPSSIPTPSGSH 60

Query: 61 QKLGEI 65
           K+ ++
Sbjct: 61 VKMSDV 66

[Close]

BLAST of Bhi06G001023 vs. TrEMBL
Match: tr|A0A061GQU4|A0A061GQU4_THECC (Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_039769 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.1e-08
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 4  GGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKNKQKLGE 63
          G  + + VAVAIDKDK SQ ALKW ++ L+S+GQ +TLLHVK KPSS   P+ N   + +
Sbjct: 7  GEKRDESVAVAIDKDKSSQYALKWVVDHLMSRGQTITLLHVKTKPSSIPTPTGNHVNISD 66

Query: 64 I 65
          +
Sbjct: 67 V 67

[Close]

BLAST of Bhi06G001023 vs. NCBI nr
Match: KGN61213.1 (hypothetical protein Csa_2G070300 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 9.5e-17
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPS 56
          MAKGGAQKKDVAVAIDKDKCSQ ALKW IERLLS+GQ+VTLLHVKQKPSSSA  S
Sbjct: 1  MAKGGAQKKDVAVAIDKDKCSQYALKWAIERLLSRGQVVTLLHVKQKPSSSAAHS 55

[Close]

BLAST of Bhi06G001023 vs. NCBI nr
Match: XP_011650128.1 (PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 9.5e-17
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPS 56
          MAKGGAQKKDVAVAIDKDKCSQ ALKW IERLLS+GQ+VTLLHVKQKPSSSA  S
Sbjct: 1  MAKGGAQKKDVAVAIDKDKCSQYALKWAIERLLSRGQVVTLLHVKQKPSSSAAHS 55

[Close]

BLAST of Bhi06G001023 vs. NCBI nr
Match: XP_022929605.1 (U-box domain-containing protein 35-like [Cucurbita moschata])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKN 58
          MA+GGAQKK++ VAIDKDK SQ ALKWTI+RLLS+GQ+VTLLHVK K SS+A  + N
Sbjct: 1  MARGGAQKKEMVVAIDKDKGSQQALKWTIDRLLSRGQVVTLLHVKHKSSSTANATTN 57

[Close]

BLAST of Bhi06G001023 vs. NCBI nr
Match: XP_022997518.1 (uncharacterized protein LOC111492412, partial [Cucurbita maxima])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKN 58
          MA+GGAQKK++ VAIDKDK SQ ALKWTI+RLLS+GQ+VTLLHVK K SS+A  + N
Sbjct: 1  MARGGAQKKEMVVAIDKDKGSQQALKWTIDRLLSRGQVVTLLHVKHKSSSAANATTN 57

[Close]

BLAST of Bhi06G001023 vs. NCBI nr
Match: XP_023545444.1 (U-box domain-containing protein 35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-12
Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MAKGGAQKKDVAVAIDKDKCSQNALKWTIERLLSKGQMVTLLHVKQKPSSSAQPSKN 58
          MA+GGAQKK++ VAIDKDK S+ ALKWTI+RLLS+GQ+VTLLHVK K SS+A  + N
Sbjct: 1  MARGGAQKKEMVVAIDKDKGSKQALKWTIDRLLSRGQVVTLLHVKHKSSSAANATTN 57

The following BLAST results are available for this feature:

BLAST of Bhi06G001023 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi06G001023 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16760.1	6.8e-09	55.10	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain	[more]
AT5G35380.1	6.8e-09	51.72	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain	[more]
AT4G31230.1	1.2e-08	62.50	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain	[more]
AT2G24370.1	1.5e-08	50.00	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain	[more]
AT1G78940.2	5.7e-08	55.77	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain	[more]

BLAST of Bhi06G001023 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHF7\|A0A0A0LHF7_CUCSA	6.3e-17	89.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070300 PE=4 SV=1	[more]
tr\|A5C5X6\|A5C5X6_VITVI	2.8e-09	58.06	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012742 PE=4 SV=1	[more]
tr\|F6H9Q1\|F6H9Q1_VITVI	2.8e-09	58.06	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0065g00390 PE=4 SV=...	[more]
tr\|A0A2P5WNJ9\|A0A2P5WNJ9_GOSBA	3.7e-09	54.55	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA28018 PE=4 SV...	[more]
tr\|A0A061GQU4\|A0A061GQU4_THECC	3.1e-08	52.46	Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative is...	[more]

BLAST of Bhi06G001023 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61213.1	9.5e-17	89.09	hypothetical protein Csa_2G070300 [Cucumis sativus]	[more]
XP_011650128.1	9.5e-17	89.09	PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus]	[more]
XP_022929605.1	1.1e-12	71.93	U-box domain-containing protein 35-like [Cucurbita moschata]	[more]
XP_022997518.1	1.1e-12	71.93	uncharacterized protein LOC111492412, partial [Cucurbita maxima]	[more]
XP_023545444.1	3.2e-12	70.18	U-box domain-containing protein 35-like [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR006016	UspA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006950	response to stress
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001023	Bhi06M001023	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006016	UspA	PFAM	PF00582	Usp	coord: 10..57 e-value: 3.8E-6 score: 27.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 8..66 e-value: 2.1E-5 score: 27.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..67
None	No IPR available	PANTHER	PTHR27003:SF84	ADENINE NUCLEOTIDE ALPHA HYDROLASES-DOMAIN CONTAINING PROTEIN KINASE-RELATED	coord: 6..58
None	No IPR available	PANTHER	PTHR27003	FAMILY NOT NAMED	coord: 6..58

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G001023	Silver-seed gourd	carwgoB0213
Bhi06G001023	Silver-seed gourd	carwgoB0215
Bhi06G001023	Cucumber (Gy14) v1	cgywgoB366
Bhi06G001023	Cucumber (Gy14) v1	cgywgoB367
Bhi06G001023	Cucumber (Gy14) v2	cgybwgoB128
Bhi06G001023	Cucumber (Gy14) v2	cgybwgoB132
Bhi06G001023	Cucurbita maxima (Rimu)	cmawgoB0179
Bhi06G001023	Cucurbita maxima (Rimu)	cmawgoB0920
Bhi06G001023	Cucurbita moschata (Rifu)	cmowgoB0174
Bhi06G001023	Cucurbita moschata (Rifu)	cmowgoB0921
Bhi06G001023	Cucurbita pepo (Zucchini)	cpewgoB0118
Bhi06G001023	Cucurbita pepo (Zucchini)	cpewgoB0127
Bhi06G001023	Cucurbita pepo (Zucchini)	cpewgoB1010
Bhi06G001023	Wild cucumber (PI 183967)	cpiwgoB133
Bhi06G001023	Cucumber (Chinese Long) v3	cucwgoB140
Bhi06G001023	Cucumber (Chinese Long) v2	cuwgoB132
Bhi06G001023	Bottle gourd (USVL1VR-Ls)	lsiwgoB104
Bhi06G001023	Melon (DHL92) v3.6.1	medwgoB456
Bhi06G001023	Melon (DHL92) v3.6.1	medwgoB466
Bhi06G001023	Melon (DHL92) v3.5.1	mewgoB453
Bhi06G001023	Melon (DHL92) v3.5.1	mewgoB456
Bhi06G001023	Melon (DHL92) v3.5.1	mewgoB464
Bhi06G001023	Watermelon (Charleston Gray)	wcgwgoB142
Bhi06G001023	Watermelon (Charleston Gray)	wcgwgoB152
Bhi06G001023	Watermelon (97103) v2	wgowmbB115
Bhi06G001023	Watermelon (97103) v2	wgowmbB124
Bhi06G001023	Watermelon (97103) v1	wgowmB138
Bhi06G001023	Watermelon (97103) v1	wgowmB149
Bhi06G001023	Silver-seed gourd	carwgoB0005
Bhi06G001023	Silver-seed gourd	carwgoB0006