Bhi06G000773 (gene) Wax gourd

NameBhi06G000773
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 23343038 .. 23343693 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTTTGGATTTTATTTGAATCTCTGTATTTGTTTTTCTGAGTTAGGGTTTTTAGGGTTTTGATGTTTGTTTGTGAGTTGTTGGTTTGAATTAGGTGAAATCGTTTGTATTGACGATGGCTGCTTCTTCGTCGTCTTTCAAACCCTGCCGCCTGCCTATCTCGGAGTTTCATCCATCAGACGAATCCCGGATGACCCTAACTGGGAGTCTGAAACTACGTTAGAGTTCGAGGACGACGATGAACCCTGGGAAGGTGAAAGTGAGGTCATCATTTTTATTTTAAATTCTGGGATTGGGATTTTTTGGGAATACTACTAATAATTAATAATGGGGGCAGGGGTTCGATATTCCTTCACTTCCTGATAATGGTATGTGTGGTGGACTTGAACGGGTTTCCAGACGCTGCCTATCTAGCGATTATCTTCGAGAATGTGCTGAAGTTGGCATCAAAGATTTCAACTCTCAGAATGTGTACTCCATCTCTCTAATCTAATCTTACAGATTTTGAAAGGGTACCGACTTTGAGTTTGTGGAGATTGAAAAGGCTTGCAGTCAGGTTGTGTGTGGTTGTATGTTCTATCTCACTCTCAAGGTTAGGCCTCAGGGGATGCCTTCTGATTACCCAACCACTTCCCTTCAGGCCAAAGTTCT

mRNA sequence

ATGTTGGGTGAAATCGTTTGTATTGACGATGGCTGCTTCTTCGTCGTCTTTCAAACCCTGCCGCCTGCCTATCTCGGAGTTTCATCCATCAGACGAATCCCGGATGACCCTAACTGGGAGTCTGAAACTACGTTAGAGTTCGAGGACGACGATGAACCCTGGGAAGGTGAAAGTGAGGGGTTCGATATTCCTTCACTTCCTGATAATGGTATGTGTGGTGGACTTGAACGGGTTTCCAGACGCTGCCTATCTAGCGATTATCTTCGAGAATGTGCTGAAGTTGGCATCAAAGATTTCAACTCTCAGAATGTTCAGGTTGTGTGTGGTTGTATGTTCTATCTCACTCTCAAGGTTAGGCCTCAGGGGATGCCTTCTGATTACCCAACCACTTCCCTTCAGGCCAAAGTTCT

Coding sequence (CDS)

ATGTTGGGTGAAATCGTTTGTATTGACGATGGCTGCTTCTTCGTCGTCTTTCAAACCCTGCCGCCTGCCTATCTCGGAGTTTCATCCATCAGACGAATCCCGGATGACCCTAACTGGGAGTCTGAAACTACGTTAGAGTTCGAGGACGACGATGAACCCTGGGAAGGTGAAAGTGAGGGGTTCGATATTCCTTCACTTCCTGATAATGGTATGTGTGGTGGACTTGAACGGGTTTCCAGACGCTGCCTATCTAGCGATTATCTTCGAGAATGTGCTGAAGTTGGCATCAAAGATTTCAACTCTCAGAATGTTCAGGTTGTGTGTGGTTGTATGTTCTATCTCACTCTCAAGGTTAGGCCTCAGGGGATGCCTTCTGATTACCCAACCACTTCCCTTCAGGCCAAAGTTCT

Protein sequence

MLGEIVCIDDGCFFVVFQTLPPAYLGVSSIRRIPDDPNWESETTLEFEDDDEPWEGESEGFDIPSLPDNGMCGGLERVSRRCLSSDYLRECAEVGIKDFNSQNVQVVCGCMFYLTLKVRPQGMPSDYPTTSLQAKV
BLAST of Bhi06G000773 vs. NCBI nr
Match: XP_022137526.1 (uncharacterized protein LOC111008952 [Momordica charantia] >XP_022137527.1 uncharacterized protein LOC111008952 [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 5.6e-08
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0

Query: 57  ESEGFDIPSLPDNGMCGGLERVSRRCLSSDYLRECA--EVGIKDFNSQN----------- 116
           ++EGFD+PS PD+  CG +E ++   L S+ L+ECA  +  +  FN QN           
Sbjct: 52  KTEGFDMPSFPDSYACGRIETITGSRLHSEELQECADKDKAVDYFNQQNGTSFEFVKMVK 111

Query: 117 --VQVVCGCMFYLTLKVRPQGMPSDYPTTSLQAKV 137
              + V G M+YLT +V+  G P + PT +LQA+V
Sbjct: 112 ATNKAVVGIMYYLTFEVKQMGSPPNSPTKTLQARV 146

BLAST of Bhi06G000773 vs. NCBI nr
Match: XP_022137488.1 (uncharacterized protein LOC111008920 isoform X1 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 0

Query: 57  ESEGFDIPSLPDNGMCGGLERVSRRCLSSDYLRECAEVGIKDFNSQ-------------N 116
           ESEGFD+PS P       +  +    L S+ +RECA   IK +N++             N
Sbjct: 70  ESEGFDVPSFPGTYAFAIISPLPLINLISEEVRECAGQAIKHYNNENGASFEFVKMLKAN 129

Query: 117 VQVVCGCMFYLTLKVRPQGMPSDYPTTSLQAKV 137
            Q   G +F+LT +V+  G P D PTT+LQA+V
Sbjct: 130 SQAALGELFFLTFQVKQTGAPPDSPTTTLQARV 162

BLAST of Bhi06G000773 vs. NCBI nr
Match: XP_023525925.1 (uncharacterized protein LOC111789396 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05
Identity = 37/124 (29.84%), Postives = 58/124 (46.77%), Query Frame = 0

Query: 44  TLEFEDDDEPWE------------------GESEGFDIPSLPDNGMCGGLERVSRRCLSS 103
           TL+ +D DE +E                   +++GFD+P+ P+    G +  +    LS 
Sbjct: 43  TLDLDDSDEEYEHGVRVMNREEMSRYYQVLRDTDGFDVPTFPNTYALGLIVPICEEYLSK 102

Query: 104 DYLRECAEVGIKDFN-------------SQNVQVVCGCMFYLTLKVRPQGMPSDYPTTSL 137
            YLR+CAE  I  +N               N QVV G  +Y+T  V+  G  +++PTT+ 
Sbjct: 103 PYLRDCAEKAISHYNIRNGTNFEFVKIVKANQQVVSGFFYYITFDVKQIG--TEFPTTTF 162

BLAST of Bhi06G000773 vs. NCBI nr
Match: XP_022948409.1 (uncharacterized protein LOC111452100 [Cucurbita moschata])

HSP 1 Score: 57.0 bits (136), Expect = 5.8e-05
Identity = 36/116 (31.03%), Postives = 60/116 (51.72%), Query Frame = 0

Query: 45  LEFEDDDEPWEGE-----------SEGFDIPSLPDNGMCGGLERVSRRCLSSDYLRECAE 104
           L+++ DD+    E           S+GFD+P+L D+   G +  VS + LS  +LRECA+
Sbjct: 16  LDYDSDDDELTPEELSRYNEAALASDGFDVPTLRDSSEVGLIVPVSEKLLSKPHLRECAQ 75

Query: 105 VGIKDFNSQN-------------VQVVCGCMFYLTLKVRPQGMPSDYPTTSLQAKV 137
             I ++N +N              QV  G ++Y+T  V+  G+  ++ TT+ +AKV
Sbjct: 76  KAISEYNIENGTNYEFVKIAKATHQVAWGLLYYITFDVKQIGI--EFLTTTFEAKV 129

BLAST of Bhi06G000773 vs. NCBI nr
Match: XP_023525978.1 (uncharacterized protein LOC111789436 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 0

Query: 45  LEFEDDDEPWEGE-----------SEGFDIPSLPDNGMCGGLERVSRRCLSSDYLRECAE 104
           L+++ DD+    E           S+GFD+P+L D+   G +  VS + LS  +LRECA+
Sbjct: 16  LDYDSDDDELTPEELSRYNEAALASDGFDVPTLRDSSEVGLIVPVSEKLLSKPHLRECAQ 75

Query: 105 VGIKDFNSQN------VQVV-------CGCMFYLTLKVRPQGMPSDYPTTSLQAKV 137
             I ++N +N      V++V        G ++Y+T  V+  G+  ++ TT+ +AKV
Sbjct: 76  KAISEYNIENGTNYEFVKIVKATHQASWGLLYYITFDVKQIGI--EFLTTTFEAKV 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022137526.15.6e-0837.89uncharacterized protein LOC111008952 [Momordica charantia] >XP_022137527.1 uncha... [more]
XP_022137488.11.8e-0637.63uncharacterized protein LOC111008920 isoform X1 [Momordica charantia][more]
XP_023525925.12.0e-0529.84uncharacterized protein LOC111789396 [Cucurbita pepo subsp. pepo][more]
XP_022948409.15.8e-0531.03uncharacterized protein LOC111452100 [Cucurbita moschata][more]
XP_023525978.12.2e-0431.03uncharacterized protein LOC111789436 [Cucurbita pepo subsp. pepo][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000773Bhi06M000773mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..68