Bhi06G000714 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000714
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr6 : 20667775 .. 20668260 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATTCCGAAGAAGCTCTAAATCAAAATCCCGACCCGATTCGGCCCGAAAATTTCCTAGTAATTAGAGAAAACTATTTTGTTCATGAGGAATCCCCTGTTTTTCCCCCGATTCACCATGAAGATTTGCCAGTTGGAAGTGTTTCGATAGCCTCCGACCAATCGGAATCATCGGAATTATCGGAATCATCATCGGCTCCAACGACTTCGGATTTGCGATGGAGAGCCGTTGTGGGAGAAGCTATTTTGAGGAGTTGTGAGATGTTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATCTTACGCTGTGAGACTATGCTCTGTTTTTCCGGTTACTGCAATGGCGGCTGTGTTGGTGATTTTGGTGTTTTTGTTGAAGATGAAGATGAAGCTGCGGCTGCCATGGCGTCCACGATCTGTCGCTGTGAGTAGGGATAACGAAGACCGTTTGGTTCTTCTTCTTCAACACAAGGATGAG

mRNA sequence

ATGGATGATTCCGAAGAAGCTCTAAATCAAAATCCCGACCCGATTCGGCCCGAAAATTTCCTAGTAATTAGAGAAAACTATTTTGTTCATGAGGAATCCCCTGTTTTTCCCCCGATTCACCATGAAGATTTGCCAGTTGGAAGTGTTTCGATAGCCTCCGACCAATCGGAATCATCGGAATTATCGGAATCATCATCGGCTCCAACGACTTCGGATTTGCGATGGAGAGCCGTTGTGGGAGAAGCTATTTTGAGGAGTTGTGAGATGTTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATCTTACGCTGTGAGACTATGCTCTGTTTTTCCGGTTACTGCAATGGCGGCTGTGTTGGTGATTTTGGTGTTTTTGTTGAAGATGAAGATGAAGCTGCGGCTGCCATGGCGTCCACGATCTGTCGCTGTGAGTAGGGATAACGAAGACCGTTTGGTTCTTCTTCTTCAACACAAGGATGAG

Coding sequence (CDS)

ATGGATGATTCCGAAGAAGCTCTAAATCAAAATCCCGACCCGATTCGGCCCGAAAATTTCCTAGTAATTAGAGAAAACTATTTTGTTCATGAGGAATCCCCTGTTTTTCCCCCGATTCACCATGAAGATTTGCCAGTTGGAAGTGTTTCGATAGCCTCCGACCAATCGGAATCATCGGAATTATCGGAATCATCATCGGCTCCAACGACTTCGGATTTGCGATGGAGAGCCGTTGTGGGAGAAGCTATTTTGAGGAGTTGTGAGATGTTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATCTTACGCTGTGAGACTATGCTCTGTTTTTCCGGTTACTGCAATGGCGGCTGTGTTGGTGATTTTGGTGTTTTTGTTGAAGATGAAGATGAAGCTGCGGCTGCCATGGCGTCCACGATCTGTCGCTGTGAGTAGGGATAACGAAGACCGTTTGGTTCTTCTTCTTCAACACAAGGATGAG

Protein sequence

MDDSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSESSELSESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAMAAVLVILVFLLKMKMKLRLPWRPRSVAVSRDNEDRLVLLLQHKDE

Homology

[Close]

BLAST of Bhi06G000714 vs. TrEMBL
Match: tr|A0A1S3CPJ3|A0A1S3CPJ3_CUCME (uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.8e-31
Identity = 87/165 (52.73%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSE----- 62
           + EEA N NPD    ENFLVIR++YFVH ESPVFPPI HEDLPV +V      S+     
Sbjct: 5   EGEEAPNPNPD----ENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDXXXXX 64

Query: 63  SSELSESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAM 122
                        SD+R RAVV EAI+R CE+ KAKVVSGIVGFG Y VRL S+F  TAM
Sbjct: 65  XXXXXXXXXXXXXSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFGATAM 124

Query: 123 AXXXXXXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
           A                   WRPR +AV RD E+ LVLLL+HKDE
Sbjct: 125 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDE 165

[Close]

BLAST of Bhi06G000714 vs. TrEMBL
Match: tr|A0A0A0KRW8|A0A0A0KRW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G468990 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-18
Identity = 70/160 (43.75%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSESSELS 62
           + EEA N+NPD    ENFL                   HED PV  V++ +  + S    
Sbjct: 5   EGEEARNRNPD----ENFL-------------------HEDFPV--VTVENQIASSESXX 64

Query: 63  ESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAMAXXXX 122
                    D+R RAVV EAI+R CE+ KAKVVSGIVGFG Y VRL S+F  TAMA    
Sbjct: 65  XXXXXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMA--GL 124

Query: 123 XXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
                          WRPR +AV RD E+ LVLLL+HKDE
Sbjct: 125 LIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDE 137

[Close]

BLAST of Bhi06G000714 vs. NCBI nr
Match: XP_008465748.1 (PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 7.3e-31
Identity = 87/165 (52.73%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSE----- 62
           + EEA N NPD    ENFLVIR++YFVH ESPVFPPI HEDLPV +V      S+     
Sbjct: 5   EGEEAPNPNPD----ENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDXXXXX 64

Query: 63  SSELSESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAM 122
                        SD+R RAVV EAI+R CE+ KAKVVSGIVGFG Y VRL S+F  TAM
Sbjct: 65  XXXXXXXXXXXXXSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFGATAM 124

Query: 123 AXXXXXXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
           A                   WRPR +AV RD E+ LVLLL+HKDE
Sbjct: 125 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDE 165

[Close]

BLAST of Bhi06G000714 vs. NCBI nr
Match: KGN51157.1 (hypothetical protein Csa_5G468990 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 70/160 (43.75%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSESSELS 62
           + EEA N+NPD    ENFL                   HED PV  V++ +  + S    
Sbjct: 5   EGEEARNRNPD----ENFL-------------------HEDFPV--VTVENQIASSESXX 64

Query: 63  ESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTAMAXXXX 122
                    D+R RAVV EAI+R CE+ KAKVVSGIVGFG Y VRL S+F  TAMA    
Sbjct: 65  XXXXXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMA--GL 124

Query: 123 XXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
                          WRPR +AV RD E+ LVLLL+HKDE
Sbjct: 125 LIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDE 137

[Close]

BLAST of Bhi06G000714 vs. NCBI nr
Match: XP_023520476.1 (uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-17
Identity = 88/165 (53.33%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIH-HEDLPVGSVSIASDQSESSEL 62
           D  +AL Q      P+N LVIRE+YFVH +SPVFPP H H D                  
Sbjct: 2   DGSQALTQ------PQNLLVIREDYFVHYKSPVFPPAHAHSD----DEXXXXXXXXXXXX 61

Query: 63  SESSSAPTTSDLRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTA----M 122
                     DL+ RA VGEAI+R  E+ KAKV+SGIVGFGS+A RLCS  PVTA     
Sbjct: 62  XXXXXXXXXXDLQSRA-VGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAXXXXX 121

Query: 123 AXXXXXXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
            XXXXXXXXXXXXXXXXXX WRP +  V  DN+ RL+LLL+HKD+
Sbjct: 122 XXXXXXXXXXXXXXXXXXXPWRPPTAGVCPDNQHRLLLLLKHKDQ 155

[Close]

BLAST of Bhi06G000714 vs. NCBI nr
Match: XP_022999312.1 (uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17
Identity = 88/184 (47.83%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 3   DSEEALNQNPDPIRPENFLVIRENYFVHEESPVFPPIHHEDLPVGSVSIASDQSESSELS 62
           D  EA+ Q       +NFLVIRE+YFVH +SPVFPP HH+  P+  ++     SE S   
Sbjct: 2   DGFEAMTQ------AQNFLVIREDYFVHYKSPVFPPTHHQQFPL--ITPTHAHSEPSHXX 61

Query: 63  ESSSAPTTSDLRW----------------------RAVVGEAILRSCEMFKAKVVSGIVG 122
                                                 VGEAI+R  E+ KAKV+SGIVG
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRAVGEAIMRRWEIVKAKVISGIVG 121

Query: 123 FGSYAVRLCSVFPVTA--MAXXXXXXXXXXXXXXXXXXXWRPRSVAVSRDNEDRLVLLLQ 163
           FGS+A RLCS  PVTA    XXXXXXXXXXXXXXXXXX WRP +  V  DNE RL+LLL+
Sbjct: 122 FGSHARRLCSALPVTAXXXXXXXXXXXXXXXXXXXXXXPWRPPTAGVCPDNEHRLLLLLK 177

[Close]

BLAST of Bhi06G000714 vs. NCBI nr
Match: XP_022946585.1 (uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 83/152 (54.61%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 14  PIRPENFLVIRENYFVHEESPVFPPIH-HEDLPVGSVSIASDQSESSELSESSSAPTTSD 73
           P + +N LVIRE+YFVH +SPVFPP H H D                            D
Sbjct: 7   PTQAQNLLVIREDYFVHYKSPVFPPAHAHSD----DEXXXXXXXXXXXXXXXXXXXXXXD 66

Query: 74  LRWRAVVGEAILRSCEMFKAKVVSGIVGFGSYAVRLCSVFPVTA--MAXXXXXXXXXXXX 133
           L+ RA VGEAI+R  E+ KAKV+SGIVGFG +A RLCS  PVTA    XXXXXXXXXXXX
Sbjct: 67  LQSRA-VGEAIMRRWEIVKAKVISGIVGFGFHARRLCSALPVTAXXXXXXXXXXXXXXXX 126

Query: 134 XXXXXXXWRPRSVAVSRDNEDRLVLLLQHKDE 163
           XXXXXX WRP +  V  DN+ RL+LLL+HKD+
Sbjct: 127 XXXXXXPWRPPTAGVCPDNQHRLLLLLKHKDQ 153

The following BLAST results are available for this feature:

BLAST of Bhi06G000714 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi06G000714 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi06G000714 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPJ3\|A0A1S3CPJ3_CUCME	4.8e-31	52.73	uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=...	[more]
tr\|A0A0A0KRW8\|A0A0A0KRW8_CUCSA	4.7e-18	43.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G468990 PE=4 SV=1	[more]

BLAST of Bhi06G000714 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465748.1	7.3e-31	52.73	PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo]	[more]
KGN51157.1	7.1e-18	43.75	hypothetical protein Csa_5G468990 [Cucumis sativus]	[more]
XP_023520476.1	1.2e-17	53.33	uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo]	[more]
XP_022999312.1	2.1e-17	47.83	uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima]	[more]
XP_022946585.1	1.3e-16	54.61	uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032955	regulation of barrier septum assembly
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000714	Bhi06M000714	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37206	FAMILY NOT NAMED	coord: 18..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi06G000714	Csa5G468990	Cucumber (Chinese Long) v2	cuwgoB465
Bhi06G000714	MELO3C002975	Melon (DHL92) v3.5.1	mewgoB035
Bhi06G000714	ClCG09G021960	Watermelon (Charleston Gray)	wcgwgoB023
Bhi06G000714	CSPI05G16150	Wild cucumber (PI 183967)	cpiwgoB475
Bhi06G000714	CmoCh05G009030	Cucurbita moschata (Rifu)	cmowgoB0930
Bhi06G000714	Lsi02G017630	Bottle gourd (USVL1VR-Ls)	lsiwgoB208
Bhi06G000714	CsGy5G015840	Cucumber (Gy14) v2	cgybwgoB444
Bhi06G000714	MELO3C002975.2	Melon (DHL92) v3.6.1	medwgoB032
Bhi06G000714	CsaV3_5G025130	Cucumber (Chinese Long) v3	cucwgoB479
Bhi06G000714	Cla005563	Watermelon (97103) v1	wgowmB121
Bhi06G000714	Cla97C09G183430	Watermelon (97103) v2	wgowmbB158

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000714	Cucurbita pepo (Zucchini)	cpewgoB1009
Bhi06G000714	Wild cucumber (PI 183967)	cpiwgoB470
Bhi06G000714	Melon (DHL92) v3.6.1	medwgoB021
Bhi06G000714	Melon (DHL92) v3.5.1	mewgoB023
Bhi06G000714	Silver-seed gourd	carwgoB0402
Bhi06G000714	Cucumber (Gy14) v1	cgywgoB007
Bhi06G000714	Cucurbita maxima (Rimu)	cmawgoB0191
Bhi06G000714	Cucurbita maxima (Rimu)	cmawgoB0931
Bhi06G000714	Cucurbita moschata (Rifu)	cmowgoB0173