Bhi06G000667 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000667
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cysteine proteinase inhibitor
Location	chr6 : 18629274 .. 18629975 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAACTATAAATATCGAACTCCTTAACAATATTGAAAAGCATACCAGTCTTACAAAGTATATATCTATTCAAAAGGGTAATAGCAATGAGTGTTAAGGATGTTTCCAGCTTTGATCCAGTGCCAATTAAGGATATTGATAGCGAAGAGATTCAAGGATTTGGACGGTTTGCAGCAAGAGAAAGCGGTTTGGAGTTCATAAAAGTGCTGAACGGTTTGGAACAAGGACGACGATTGGGTCAAATACTTTTCACTCTTGTGTTGGCAGCTAAAAACTCCGATGGAATTATTTGGACTTATATAGCTAAGGTGTTTTATAATCAACGAGCCGCATTACAACTCGTAGAGTTCAAGCCTGTACTTCCCGAAAAATAAGCACTGCAATGGGTCCCTACTTAACAATATGCCTTATATATTGTAGTATTGTCATCCATCTATAAATTGACATGCATATATACAAAATAAAATAAAAATACTTATGATCTATTTCTCATCTTTATCCATCTTTATCTACCTATATAGGGTAGGGGTGTTCATTGAAACGGCTAAAACTGAATCGAATGCTAAACTAAATCGAAACCGAATTAATGTGGTTCGGTTCAGTTTGAGAAATACCCTATATTATAGGTTGTTTCTCTCTCCTTCATTCTCTCAAATTAATCGAGATTCTCTCCAATTAATTTTATGAAAGTAACAATTTGG

mRNA sequence

CAACAACTATAAATATCGAACTCCTTAACAATATTGAAAAGCATACCAGTCTTACAAAGTATATATCTATTCAAAAGGGTAATAGCAATGAGTGTTAAGGATGTTTCCAGCTTTGATCCAGTGCCAATTAAGGATATTGATAGCGAAGAGATTCAAGGATTTGGACGGTTTGCAGCAAGAGAAAGCGGTTTGGAGTTCATAAAAGTGCTGAACGGTTTGGAACAAGGACGACGATTGGGTCAAATACTTTTCACTCTTGTGTTGGCAGCTAAAAACTCCGATGGAATTATTTGGACTTATATAGCTAAGGTGTTTTATAATCAACGAGCCGCATTACAACTCGTAGAGTTCAAGCCTGTACTTCCCGAAAAATAAGCACTGCAATGGGTCCCTACTTAACAATATGCCTTATATATTGTAGTATTGTCATCCATCTATAAATTGACATGCATATATACAAAATAAAATAAAAATACTTATGATCTATTTCTCATCTTTATCCATCTTTATCTACCTATATAGGGTAGGGGTGTTCATTGAAACGGCTAAAACTGAATCGAATGCTAAACTAAATCGAAACCGAATTAATGTGGTTCGGTTCAGTTTGAGAAATACCCTATATTATAGGTTGTTTCTCTCTCCTTCATTCTCTCAAATTAATCGAGATTCTCTCCAATTAATTTTATGAAAGTAACAATTTGG

Coding sequence (CDS)

ATGAGTGTTAAGGATGTTTCCAGCTTTGATCCAGTGCCAATTAAGGATATTGATAGCGAAGAGATTCAAGGATTTGGACGGTTTGCAGCAAGAGAAAGCGGTTTGGAGTTCATAAAAGTGCTGAACGGTTTGGAACAAGGACGACGATTGGGTCAAATACTTTTCACTCTTGTGTTGGCAGCTAAAAACTCCGATGGAATTATTTGGACTTATATAGCTAAGGTGTTTTATAATCAACGAGCCGCATTACAACTCGTAGAGTTCAAGCCTGTACTTCCCGAAAAATAA

Protein sequence

MSVKDVSSFDPVPIKDIDSEEIQGFGRFAARESGLEFIKVLNGLEQGRRLGQILFTLVLAAKNSDGIIWTYIAKVFYNQRAALQLVEFKPVLPEK

Homology

[Close]

BLAST of Bhi06G000667 vs. TrEMBL
Match: tr|A0A0A0KRZ8|A0A0A0KRZ8_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.4e-22
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 1   MSVKDVS--SFDP-VPIKDIDSEEIQGFGRFAARE------SGLEFIKVLNGLEQGRRLG 60
           MS +D+S    DP VPIKD+DSEEI+GFG FA  E        LEF+KV+NGLEQGRR  
Sbjct: 1   MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRGF 60

Query: 61  QILFTLVLAAKNSDGIIWTYIAKVFYNQRAALQLVEFKPVLPE 95
           +I FTLVL+AKNS GIIWTY  KVF NQRA ++L+EF+ VL E
Sbjct: 61  RIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNE 103

[Close]

BLAST of Bhi06G000667 vs. TrEMBL
Match: tr|A0A0A0KNL2|A0A0A0KNL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 3   VKDVSSFDPVPIKDIDSEEIQGFGRFAAR-------ESGLEFIKVLNGLEQGRRLGQILF 62
           V  +  +D VPIKD+DSEEIQG G  A R          LEF+KV+NGLE+GRR  QI++
Sbjct: 12  VSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVY 71

Query: 63  TLVLAAKNSDGIIWTYIAKVFYNQRAALQLVEFKPVLPE 95
           TLVL+AKNS GI+WTY AKV +N RAA++L EF+ VLPE
Sbjct: 72  TLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPE 110

[Close]

BLAST of Bhi06G000667 vs. NCBI nr
Match: KGN51192.1 (hypothetical protein Csa_5G487690 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 8.1e-22
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 1   MSVKDVS--SFDP-VPIKDIDSEEIQGFGRFAARE------SGLEFIKVLNGLEQGRRLG 60
           MS +D+S    DP VPIKD+DSEEI+GFG FA  E        LEF+KV+NGLEQGRR  
Sbjct: 1   MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRGF 60

Query: 61  QILFTLVLAAKNSDGIIWTYIAKVFYNQRAALQLVEFKPVLPE 95
           +I FTLVL+AKNS GIIWTY  KVF NQRA ++L+EF+ VL E
Sbjct: 61  RIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNE 103

[Close]

BLAST of Bhi06G000667 vs. NCBI nr
Match: KGN51193.1 (hypothetical protein Csa_5G487700 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 3   VKDVSSFDPVPIKDIDSEEIQGFGRFAAR-------ESGLEFIKVLNGLEQGRRLGQILF 62
           V  +  +D VPIKD+DSEEIQG G  A R          LEF+KV+NGLE+GRR  QI++
Sbjct: 12  VSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVY 71

Query: 63  TLVLAAKNSDGIIWTYIAKVFYNQRAALQLVEFKPVLPE 95
           TLVL+AKNS GI+WTY AKV +N RAA++L EF+ VLPE
Sbjct: 72  TLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPE 110

The following BLAST results are available for this feature:

BLAST of Bhi06G000667 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi06G000667 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi06G000667 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRZ8\|A0A0A0KRZ8_CUCSA	5.4e-22	62.14	Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=3 SV...	[more]
tr\|A0A0A0KNL2\|A0A0A0KNL2_CUCSA	1.2e-21	58.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1	[more]

BLAST of Bhi06G000667 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51192.1	8.1e-22	62.14	hypothetical protein Csa_5G487690 [Cucumis sativus]	[more]
KGN51193.1	1.8e-21	58.59	hypothetical protein Csa_5G487700 [Cucumis sativus]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000667	Bhi06M000667	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 4..94 e-value: 2.1E-6 score: 29.6
None	No IPR available	SUPERFAMILY	SSF54403	Cystatin/monellin	coord: 14..92

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000667	Cucumber (Gy14) v1	cgywgoB558
Bhi06G000667	Cucumber (Gy14) v2	cgybwgoB449
Bhi06G000667	Cucurbita maxima (Rimu)	cmawgoB0191
Bhi06G000667	Cucurbita maxima (Rimu)	cmawgoB0931
Bhi06G000667	Cucurbita moschata (Rifu)	cmowgoB0173
Bhi06G000667	Cucurbita moschata (Rifu)	cmowgoB0922
Bhi06G000667	Cucurbita pepo (Zucchini)	cpewgoB0129
Bhi06G000667	Cucurbita pepo (Zucchini)	cpewgoB1009
Bhi06G000667	Wild cucumber (PI 183967)	cpiwgoB475
Bhi06G000667	Cucumber (Chinese Long) v3	cucwgoB484
Bhi06G000667	Cucumber (Chinese Long) v2	cuwgoB472
Bhi06G000667	Bottle gourd (USVL1VR-Ls)	lsiwgoB208
Bhi06G000667	Melon (DHL92) v3.6.1	medwgoB021
Bhi06G000667	Melon (DHL92) v3.5.1	mewgoB023
Bhi06G000667	Watermelon (Charleston Gray)	wcgwgoB023
Bhi06G000667	Watermelon (97103) v2	wgowmbB158
Bhi06G000667	Watermelon (97103) v1	wgowmB121
Bhi06G000667	Silver-seed gourd	carwgoB1250