Bhi06G000664 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000664
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cysteine proteinase inhibitor
Location	chr6 : 18408298 .. 18408618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCGAAGATATTGATCTAATTCCTAACGTTGATCTAGTGCCAATTAAGGATATTGATAGTGAGGAGATACAAGGATATGGAAGCTTTGCAGTGCGTGAACATAATGAAACAATAGGAGAAAAACTGGAGTTCGAGCGCGTGATAAACGGGTTGGAACAAGGAAGAAGATCTATTCGAATAGTTTTCACTCTTGTGTTGGTGGCTAAAAACTCCTGTGGCATTAATTGGACTTATATAGCTAAGGTGTTTTTTAATCAACGGGCAGCAGTACGTCTCTTAAATTTTGAATCTGTACATCCGCAGAATAAAAGCTAA

mRNA sequence

ATGAGTTCCGAAGATATTGATCTAATTCCTAACGTTGATCTAGTGCCAATTAAGGATATTGATAGTGAGGAGATACAAGGATATGGAAGCTTTGCAGTGCGTGAACATAATGAAACAATAGGAGAAAAACTGGAGTTCGAGCGCGTGATAAACGGGTTGGAACAAGGAAGAAGATCTATTCGAATAGTTTTCACTCTTGTGTTGGTGGCTAAAAACTCCTGTGGCATTAATTGGACTTATATAGCTAAGGTGTTTTTTAATCAACGGGCAGCAGTACGTCTCTTAAATTTTGAATCTGTACATCCGCAGAATAAAAGCTAA

Coding sequence (CDS)

ATGAGTTCCGAAGATATTGATCTAATTCCTAACGTTGATCTAGTGCCAATTAAGGATATTGATAGTGAGGAGATACAAGGATATGGAAGCTTTGCAGTGCGTGAACATAATGAAACAATAGGAGAAAAACTGGAGTTCGAGCGCGTGATAAACGGGTTGGAACAAGGAAGAAGATCTATTCGAATAGTTTTCACTCTTGTGTTGGTGGCTAAAAACTCCTGTGGCATTAATTGGACTTATATAGCTAAGGTGTTTTTTAATCAACGGGCAGCAGTACGTCTCTTAAATTTTGAATCTGTACATCCGCAGAATAAAAGCTAA

Protein sequence

MSSEDIDLIPNVDLVPIKDIDSEEIQGYGSFAVREHNETIGEKLEFERVINGLEQGRRSIRIVFTLVLVAKNSCGINWTYIAKVFFNQRAAVRLLNFESVHPQNKS

Homology

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BLAST of Bhi06G000664 vs. TrEMBL
Match: tr|A0A0A0KRZ8|A0A0A0KRZ8_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 75/105 (71.43%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 1   MSSEDIDLIPNVD-LVPIKDIDSEEIQGYGSFAVREHNETIGEKLEFERVINGLEQGRRS 60
           MSSEDI  IP VD  VPIKD+DSEEI+G+G FAV EHNE  GE LEF +VINGLEQGRR 
Sbjct: 1   MSSEDIS-IPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRG 60

Query: 61  IRIVFTLVLVAKNSCGINWTYIAKVFFNQRAAVRLLNFESVHPQN 105
            RI FTLVL AKNS GI WTY  KVF NQRA VRLL FE+V  +N
Sbjct: 61  FRIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNEN 104

[Close]

BLAST of Bhi06G000664 vs. TrEMBL
Match: tr|A0A0A0KNL2|A0A0A0KNL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-27
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 6   IDLIPNVDLVPIKDIDSEEIQGYGSFAVREHNET-IGEKLEFERVINGLEQGRRSIRIVF 65
           +  +P+ D VPIKD+DSEEIQG G  AVR HNET  GE LEF +VINGLE+GRR  +IV+
Sbjct: 12  VSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVY 71

Query: 66  TLVLVAKNSCGINWTYIAKVFFNQRAAVRLLNFESVHPQN 105
           TLVL AKNS GI WTY AKV FN RAAVRL  FE+V P+N
Sbjct: 72  TLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPEN 111

[Close]

BLAST of Bhi06G000664 vs. TrEMBL
Match: tr|A0A0A0KNH4|A0A0A0KNH4_CUCSA (Cystatin OS=Cucumis sativus OX=3659 GN=Csa_5G485690 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.6e-09
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MSSEDIDLIPNVDLVPIKDIDSEEIQGYGSFAVREHNETIGEKLEFERVINGLEQGR 58
          M S + D+ P    VPIKDIDS EIQGY  FA   HNE  G+KL+F+R INGLEQGR
Sbjct: 1  MCSRNFDVPP----VPIKDIDSAEIQGYARFATERHNEITGDKLQFQRAINGLEQGR 53

[Close]

BLAST of Bhi06G000664 vs. TrEMBL
Match: tr|A0A0A0L191|A0A0A0L191_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.9e-05
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 14  LVPIKDIDSEEIQGYGSFAVREH-NETIGEKLEFERVINGLEQGRR-----SIRIVFTLV 73
           L PI DI+   +Q  G  AV +H +   GEKL+F RV+NGL+  +      +  I++ LV
Sbjct: 10  LKPIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 69

Query: 74  LVAKNSCGINWTY---IAKVFFNQRAAVRLLNFESVHPQNK 106
           L AK +  INWTY   + KV+         L+FE V P NK
Sbjct: 70  LEAKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYNK 110

[Close]

BLAST of Bhi06G000664 vs. TrEMBL
Match: tr|A0A0A0KZ98|A0A0A0KZ98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 14  LVPIKDIDSEEIQGYGSFAVRE-HNETIGEKLEFERVINGLEQGRR-----SIRIVFTLV 73
           L PI DI+   +Q  G  AV   +++  GEKL+F RV+NGL+  +      +  I++ LV
Sbjct: 10  LKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 69

Query: 74  LVAKNSCGINWTYIAKVFFNQRAAVR--LLNFESVHPQNK 106
           L AK +  INWTY  K+       +R   L+FE V P  K
Sbjct: 70  LEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYK 109

[Close]

BLAST of Bhi06G000664 vs. NCBI nr
Match: KGN51192.1 (hypothetical protein Csa_5G487690 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-29
Identity = 75/105 (71.43%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 1   MSSEDIDLIPNVD-LVPIKDIDSEEIQGYGSFAVREHNETIGEKLEFERVINGLEQGRRS 60
           MSSEDI  IP VD  VPIKD+DSEEI+G+G FAV EHNE  GE LEF +VINGLEQGRR 
Sbjct: 1   MSSEDIS-IPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRG 60

Query: 61  IRIVFTLVLVAKNSCGINWTYIAKVFFNQRAAVRLLNFESVHPQN 105
            RI FTLVL AKNS GI WTY  KVF NQRA VRLL FE+V  +N
Sbjct: 61  FRIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNEN 104

[Close]

BLAST of Bhi06G000664 vs. NCBI nr
Match: KGN51193.1 (hypothetical protein Csa_5G487700 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 5.5e-27
Identity = 67/100 (67.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 6   IDLIPNVDLVPIKDIDSEEIQGYGSFAVREHNET-IGEKLEFERVINGLEQGRRSIRIVF 65
           +  +P+ D VPIKD+DSEEIQG G  AVR HNET  GE LEF +VINGLE+GRR  +IV+
Sbjct: 12  VSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVY 71

Query: 66  TLVLVAKNSCGINWTYIAKVFFNQRAAVRLLNFESVHPQN 105
           TLVL AKNS GI WTY AKV FN RAAVRL  FE+V P+N
Sbjct: 72  TLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPEN 111

[Close]

BLAST of Bhi06G000664 vs. NCBI nr
Match: KGN51190.1 (Cystatin [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MSSEDIDLIPNVDLVPIKDIDSEEIQGYGSFAVREHNETIGEKLEFERVINGLEQGR 58
          M S + D+ P    VPIKDIDS EIQGY  FA   HNE  G+KL+F+R INGLEQGR
Sbjct: 1  MCSRNFDVPP----VPIKDIDSAEIQGYARFATERHNEITGDKLQFQRAINGLEQGR 53

[Close]

BLAST of Bhi06G000664 vs. NCBI nr
Match: KGN54824.1 (hypothetical protein Csa_4G508520 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 5.9e-05
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 14  LVPIKDIDSEEIQGYGSFAVREH-NETIGEKLEFERVINGLEQGRR-----SIRIVFTLV 73
           L PI DI+   +Q  G  AV +H +   GEKL+F RV+NGL+  +      +  I++ LV
Sbjct: 10  LKPIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 69

Query: 74  LVAKNSCGINWTY---IAKVFFNQRAAVRLLNFESVHPQNK 106
           L AK +  INWTY   + KV+         L+FE V P NK
Sbjct: 70  LEAKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYNK 110

[Close]

BLAST of Bhi06G000664 vs. NCBI nr
Match: KGN54823.1 (hypothetical protein Csa_4G508510 [Cucumis sativus])

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 14  LVPIKDIDSEEIQGYGSFAVRE-HNETIGEKLEFERVINGLEQGRR-----SIRIVFTLV 73
           L PI DI+   +Q  G  AV   +++  GEKL+F RV+NGL+  +      +  I++ LV
Sbjct: 10  LKPIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLV 69

Query: 74  LVAKNSCGINWTYIAKVFFNQRAAVR--LLNFESVHPQNK 106
           L AK +  INWTY  K+       +R   L+FE V P  K
Sbjct: 70  LEAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPYYK 109

The following BLAST results are available for this feature:

BLAST of Bhi06G000664 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi06G000664 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi06G000664 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRZ8\|A0A0A0KRZ8_CUCSA	1.7e-29	71.43	Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=3 SV...	[more]
tr\|A0A0A0KNL2\|A0A0A0KNL2_CUCSA	3.6e-27	67.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1	[more]
tr\|A0A0A0KNH4\|A0A0A0KNH4_CUCSA	7.6e-09	61.40	Cystatin OS=Cucumis sativus OX=3659 GN=Csa_5G485690 PE=4 SV=1	[more]
tr\|A0A0A0L191\|A0A0A0L191_CUCSA	3.9e-05	39.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1	[more]
tr\|A0A0A0KZ98\|A0A0A0KZ98_CUCSA	1.9e-04	38.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1	[more]

BLAST of Bhi06G000664 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51192.1	2.6e-29	71.43	hypothetical protein Csa_5G487690 [Cucumis sativus]	[more]
KGN51193.1	5.5e-27	67.00	hypothetical protein Csa_5G487700 [Cucumis sativus]	[more]
KGN51190.1	1.1e-08	61.40	Cystatin [Cucumis sativus]	[more]
KGN54824.1	5.9e-05	39.60	hypothetical protein Csa_4G508520 [Cucumis sativus]	[more]
KGN54823.1	2.9e-04	38.00	hypothetical protein Csa_4G508510 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004869	cysteine-type endopeptidase inhibitor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027214	Cystatin
IPR000010	Cystatin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000664	Bhi06M000664	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 13..106 e-value: 8.9E-12 score: 46.9
None	No IPR available	PANTHER	PTHR11413:SF65	CYSTEINE PROTEINASE INHIBITOR 5	coord: 15..95
None	No IPR available	PRODOM	PD001231		coord: 25..55 e-value: 4.0E-4 score: 97.0
None	No IPR available	SUPERFAMILY	SSF54403	Cystatin/monellin	coord: 16..99
IPR000010	Cystatin domain	PFAM	PF16845	SQAPI	coord: 17..95 e-value: 5.0E-12 score: 45.9
IPR027214	Cystatin	PANTHER	PTHR11413	CYSTATIN FAMILY MEMBER	coord: 15..95

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000664	Cucumber (Gy14) v1	cgywgoB558
Bhi06G000664	Cucumber (Gy14) v2	cgybwgoB449
Bhi06G000664	Cucurbita maxima (Rimu)	cmawgoB0191
Bhi06G000664	Cucurbita maxima (Rimu)	cmawgoB0931
Bhi06G000664	Cucurbita moschata (Rifu)	cmowgoB0173
Bhi06G000664	Cucurbita moschata (Rifu)	cmowgoB0922
Bhi06G000664	Cucurbita pepo (Zucchini)	cpewgoB0129
Bhi06G000664	Cucurbita pepo (Zucchini)	cpewgoB1009
Bhi06G000664	Wild cucumber (PI 183967)	cpiwgoB475
Bhi06G000664	Cucumber (Chinese Long) v3	cucwgoB484
Bhi06G000664	Cucumber (Chinese Long) v2	cuwgoB472
Bhi06G000664	Bottle gourd (USVL1VR-Ls)	lsiwgoB208
Bhi06G000664	Melon (DHL92) v3.6.1	medwgoB021
Bhi06G000664	Melon (DHL92) v3.5.1	mewgoB023
Bhi06G000664	Silver-seed gourd	carwgoB1250